RNA–Protein interactions for RNA: ENST00000585388.1

LSM12-202, Transcript of LSM12 homolog, humanhuman

TSL 3 BASIC

Gene LSM12, Length 942 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12-202ENST00000585388 UTF1Q5T230 341 aa12.99□□□□□ -0.33
LSM12-202ENST00000585388 RSBN1Q5VWQ0 802 aaPredicted RBP12.99□□□□□ -0.33
LSM12-202ENST00000585388 CBR4Q8N4T8 237 aa12.99□□□□□ -0.33
LSM12-202ENST00000585388 DRAM1Q8N682 238 aa12.99□□□□□ -0.33
LSM12-202ENST00000585388 C5orf56Q8N8D9 126 aa12.99□□□□□ -0.33
LSM12-202ENST00000585388 OR10X1Q8NGY0 326 aa12.99□□□□□ -0.33
LSM12-202ENST00000585388 ZNF649Q9BS31 505 aa12.99□□□□□ -0.33
LSM12-202ENST00000585388 PSG11Q9UQ72 335 aa12.99□□□□□ -0.33
LSM12-202ENST00000585388 NPIPB11E5RHQ5 1161 aa12.98□□□□□ -0.33
LSM12-202ENST00000585388 E9PI62 339 aa12.98□□□□□ -0.33
LSM12-202ENST00000585388 H3BNX3 289 aa12.98□□□□□ -0.33
LSM12-202ENST00000585388 SSTR5P35346 364 aa12.98□□□□□ -0.33
LSM12-202ENST00000585388 GNG10P50151 68 aa12.98□□□□□ -0.33
LSM12-202ENST00000585388 RPL23AP62750 156 aaKnown RBP12.98□□□□□ -0.33
LSM12-202ENST00000585388 EGFEM1PQ0D2K5 195 aa12.98□□□□□ -0.33
LSM12-202ENST00000585388 VAX1Q5SQQ9 334 aa12.98□□□□□ -0.33
LSM12-202ENST00000585388 ZNF529Q6P280 563 aa12.98□□□□□ -0.33
LSM12-202ENST00000585388 SATL1Q86VE3 508 aa12.98□□□□□ -0.33
LSM12-202ENST00000585388 Q8NFD4 153 aa12.98□□□□□ -0.33
LSM12-202ENST00000585388 PLPPR1Q8TBJ4 325 aa12.98□□□□□ -0.33
LSM12-202ENST00000585388 MRGPRDQ8TDS7 321 aa12.98□□□□□ -0.33
LSM12-202ENST00000585388 LEAP2Q969E1 77 aa12.98□□□□□ -0.33
LSM12-202ENST00000585388 MCRIP2Q9BUT9 160 aaKnown RBP12.98□□□□□ -0.33
LSM12-202ENST00000585388 FAM118AQ9NWS6 357 aa12.98□□□□□ -0.33
LSM12-202ENST00000585388 AASSQ9UDR5 926 aa12.98□□□□□ -0.33
LSM12-202ENST00000585388 SERPINE3A8MV23 424 aa12.97□□□□□ -0.33
LSM12-202ENST00000585388 IGHV3-7P01780 117 aa12.97□□□□□ -0.33
LSM12-202ENST00000585388 SLC35B1P78383 322 aa12.97□□□□□ -0.33
LSM12-202ENST00000585388 LTC4SQ16873 150 aa12.97□□□□□ -0.33
LSM12-202ENST00000585388 PIGYQ3MUY2 71 aa12.97□□□□□ -0.33
LSM12-202ENST00000585388 KLHL22Q53GT1 634 aa12.97□□□□□ -0.33
LSM12-202ENST00000585388 ETV3LQ6ZN32 361 aa12.97□□□□□ -0.33
LSM12-202ENST00000585388 SLC35E3Q7Z769 313 aa12.97□□□□□ -0.33
LSM12-202ENST00000585388 ZNF329Q86UD4 541 aa12.97□□□□□ -0.33
LSM12-202ENST00000585388 FOXRED2Q8IWF2 684 aa12.97□□□□□ -0.33
LSM12-202ENST00000585388 MRPL41Q8IXM3 137 aaKnown RBP12.97□□□□□ -0.33
LSM12-202ENST00000585388 COMMD1Q8N668 190 aa12.97□□□□□ -0.33
LSM12-202ENST00000585388 OR51A2Q8NGJ7 313 aa12.97□□□□□ -0.33
LSM12-202ENST00000585388 OR10K1Q8NGX5 313 aa12.97□□□□□ -0.33
LSM12-202ENST00000585388 RHOXF1Q8NHV9 184 aa12.97□□□□□ -0.33
LSM12-202ENST00000585388 RFESDQ8TAC1 157 aa12.97□□□□□ -0.33
LSM12-202ENST00000585388 GPR148Q8TDV2 347 aa12.97□□□□□ -0.33
LSM12-202ENST00000585388 C9orf16Q9BUW7 83 aa12.97□□□□□ -0.33
LSM12-202ENST00000585388 DPCDQ9BVM2 203 aaPredicted RBP12.97□□□□□ -0.33
LSM12-202ENST00000585388 JAM3Q9BX67 310 aa12.97□□□□□ -0.33
LSM12-202ENST00000585388 AMBNQ9NP70 447 aa12.97□□□□□ -0.33
LSM12-202ENST00000585388 ZFP57Q9NU63 452 aa12.97□□□□□ -0.33
LSM12-202ENST00000585388 TAS2R4Q9NYW5 299 aa12.97□□□□□ -0.33
LSM12-202ENST00000585388 RPL36Q9Y3U8 105 aaKnown RBP12.97□□□□□ -0.33
LSM12-202ENST00000585388 NUDT19A8MXV4 375 aa12.96□□□□□ -0.33
LSM12-202ENST00000585388 HSD17B6O14756 317 aa12.96□□□□□ -0.33
LSM12-202ENST00000585388 HTR3BO95264 441 aa12.96□□□□□ -0.33
LSM12-202ENST00000585388 IGKV1D-33P01593 117 aa12.96□□□□□ -0.33
LSM12-202ENST00000585388 IGKV1-33P01594 117 aa12.96□□□□□ -0.33
LSM12-202ENST00000585388 SOX2P48431 317 aa12.96□□□□□ -0.33
LSM12-202ENST00000585388 THBS3P49746 956 aa12.96□□□□□ -0.33
LSM12-202ENST00000585388 KRTAP10-11P60412 298 aa12.96□□□□□ -0.33
LSM12-202ENST00000585388 PPP3R1P63098 170 aa12.96□□□□□ -0.33
LSM12-202ENST00000585388 ZNF816Q0VGE8 651 aaPredicted RBP12.96□□□□□ -0.33
LSM12-202ENST00000585388 DCTN2Q13561 401 aaKnown RBP12.96□□□□□ -0.33
LSM12-202ENST00000585388 CCDC58Q4VC31 144 aa12.96□□□□□ -0.33
LSM12-202ENST00000585388 NHLRC3Q5JS37 347 aa12.96□□□□□ -0.33
LSM12-202ENST00000585388 ASCL4Q6XD76 172 aa12.96□□□□□ -0.33
LSM12-202ENST00000585388 OR2W3Q7Z3T1 314 aa12.96□□□□□ -0.33
LSM12-202ENST00000585388 LINC00596Q86U02 117 aa12.96□□□□□ -0.33
LSM12-202ENST00000585388 C10orf67Q8IYJ2 551 aa12.96□□□□□ -0.33
LSM12-202ENST00000585388 OR52I1Q8NGK6 324 aa12.96□□□□□ -0.33
LSM12-202ENST00000585388 NOL4LQ96MY1 436 aaPredicted RBP12.96□□□□□ -0.33
LSM12-202ENST00000585388 IFT22Q9H7X7 185 aa12.96□□□□□ -0.33
LSM12-202ENST00000585388 MRPS18AQ9NVS2 196 aaKnown RBP12.96□□□□□ -0.33
LSM12-202ENST00000585388 PAK1IP1Q9NWT1 392 aaPredicted RBP12.96□□□□□ -0.33
LSM12-202ENST00000585388 IL36GQ9NZH8 169 aa12.96□□□□□ -0.33
LSM12-202ENST00000585388 ST3GAL6Q9Y274 331 aa12.96□□□□□ -0.33
LSM12-202ENST00000585388 WI2-2373I1.2A0A1W2PRP0 233 aa12.95□□□□□ -0.34
LSM12-202ENST00000585388 TMEM30CPA0ZSE6 113 aa12.95□□□□□ -0.34
LSM12-202ENST00000585388 OR7C1O76099 320 aaPredicted RBP12.95□□□□□ -0.34
LSM12-202ENST00000585388 IGHG2P01859 326 aa12.95□□□□□ -0.34
LSM12-202ENST00000585388 CSTBP04080 98 aaKnown RBP12.95□□□□□ -0.34
LSM12-202ENST00000585388 GZMHP20718 246 aa12.95□□□□□ -0.34
LSM12-202ENST00000585388 HOXD3P31249 432 aaPredicted RBP12.95□□□□□ -0.34
LSM12-202ENST00000585388 RBM11P57052 281 aaKnown RBP12.95□□□□□ -0.34
LSM12-202ENST00000585388 DIAPH2-AS1Q14236 149 aa12.95□□□□□ -0.34
LSM12-202ENST00000585388 DEFB121Q5J5C9 76 aa12.95□□□□□ -0.34
LSM12-202ENST00000585388 RPL22L1Q6P5R6 122 aaKnown RBP12.95□□□□□ -0.34
LSM12-202ENST00000585388 SUMF2Q8NBJ7 301 aa12.95□□□□□ -0.34
LSM12-202ENST00000585388 KLHL30-AS1Q8NEE0 82 aa12.95□□□□□ -0.34
LSM12-202ENST00000585388 RGP1Q92546 391 aaPredicted RBP12.95□□□□□ -0.34
LSM12-202ENST00000585388 TMEM106AQ96A25 262 aa12.95□□□□□ -0.34
LSM12-202ENST00000585388 S100A13Q99584 98 aa12.95□□□□□ -0.34
LSM12-202ENST00000585388 METTL9Q9H1A3 318 aa12.95□□□□□ -0.34
LSM12-202ENST00000585388 TMEM138Q9NPI0 162 aa12.95□□□□□ -0.34
LSM12-202ENST00000585388 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.95□□□□□ -0.34
LSM12-202ENST00000585388 ZMAT5Q9UDW3 170 aaKnown RBP12.95□□□□□ -0.34
LSM12-202ENST00000585388 COL7A1Q02388 2944 aa12.94□□□□□ -0.34
LSM12-202ENST00000585388 LOC100130705A0A1B0GUX0 176 aa12.94□□□□□ -0.34
LSM12-202ENST00000585388 CCRL2O00421 344 aa12.94□□□□□ -0.34
LSM12-202ENST00000585388 CDRT1O95170 752 aa12.94□□□□□ -0.34
LSM12-202ENST00000585388 GAPDHP04406 335 aaKnown RBP12.94□□□□□ -0.34
LSM12-202ENST00000585388 IL3RAP26951 378 aa12.94□□□□□ -0.34
LSM12-202ENST00000585388 MYCNOSP40205 109 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms