RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 ADH4P08319 380 aa8.77□□□□□ -1.01
LIG3-203ENST00000585370 PGAM2P15259 253 aa8.77□□□□□ -1.01
LIG3-203ENST00000585370 HLA-GP17693 338 aa8.77□□□□□ -1.01
LIG3-203ENST00000585370 GLRA1P23415 457 aa8.77□□□□□ -1.01
LIG3-203ENST00000585370 IL13RA1P78552 427 aa8.77□□□□□ -1.01
LIG3-203ENST00000585370 PDCD1Q15116 288 aa8.77□□□□□ -1.01
LIG3-203ENST00000585370 PAN3Q58A45 887 aaKnown RBP8.77□□□□□ -1.01
LIG3-203ENST00000585370 ZNF880Q6PDB4 577 aa8.77□□□□□ -1.01
LIG3-203ENST00000585370 BRICD5Q6PL45 260 aa8.77□□□□□ -1.01
LIG3-203ENST00000585370 SLC22A25Q6T423 547 aa8.77□□□□□ -1.01
LIG3-203ENST00000585370 WDR82Q6UXN9 313 aa8.77□□□□□ -1.01
LIG3-203ENST00000585370 ACP7Q6ZNF0 438 aa8.77□□□□□ -1.01
LIG3-203ENST00000585370 MUC20Q8N307 709 aaPredicted RBP8.77□□□□□ -1.01
LIG3-203ENST00000585370 LILRB1Q8NHL6 650 aaPredicted RBP8.77□□□□□ -1.01
LIG3-203ENST00000585370 PPP1R35Q8TAP8 253 aa8.77□□□□□ -1.01
LIG3-203ENST00000585370 MITD1Q8WV92 249 aa8.77□□□□□ -1.01
LIG3-203ENST00000585370 MRGPRFQ96AM1 343 aa8.77□□□□□ -1.01
LIG3-203ENST00000585370 PIK3IP1Q96FE7 263 aa8.77□□□□□ -1.01
LIG3-203ENST00000585370 ELMOD3Q96FG2 381 aa8.77□□□□□ -1.01
LIG3-203ENST00000585370 ZNF486Q96H40 463 aaPredicted RBP8.77□□□□□ -1.01
LIG3-203ENST00000585370 DMRTB1Q96MA1 342 aa8.77□□□□□ -1.01
LIG3-203ENST00000585370 ZNF488Q96MN9 340 aa8.77□□□□□ -1.01
LIG3-203ENST00000585370 WFIKKN1Q96NZ8 548 aa8.77□□□□□ -1.01
LIG3-203ENST00000585370 HS3ST6Q96QI5 342 aa8.77□□□□□ -1.01
LIG3-203ENST00000585370 PHB2Q99623 299 aa8.77□□□□□ -1.01
LIG3-203ENST00000585370 ZNF2Q9BSG1 426 aaPredicted RBP8.77□□□□□ -1.01
LIG3-203ENST00000585370 HDHD3Q9BSH5 251 aaPredicted RBP8.77□□□□□ -1.01
LIG3-203ENST00000585370 CA10Q9NS85 328 aa8.77□□□□□ -1.01
LIG3-203ENST00000585370 IL19Q9UHD0 177 aa8.77□□□□□ -1.01
LIG3-203ENST00000585370 PCDHB10Q9UN67 800 aa8.77□□□□□ -1.01
LIG3-203ENST00000585370 ATP23Q9Y6H3 246 aa8.77□□□□□ -1.01
LIG3-203ENST00000585370 IGKV1D-8A0A087WSZ0 117 aa8.76□□□□□ -1.01
LIG3-203ENST00000585370 C9orf170A2RU37 121 aa8.76□□□□□ -1.01
LIG3-203ENST00000585370 SLC33A1O00400 549 aaPredicted RBP8.76□□□□□ -1.01
LIG3-203ENST00000585370 ABCD4O14678 606 aa8.76□□□□□ -1.01
LIG3-203ENST00000585370 HS3ST1O14792 307 aa8.76□□□□□ -1.01
LIG3-203ENST00000585370 FABP7O15540 132 aa8.76□□□□□ -1.01
LIG3-203ENST00000585370 SLC22A5O76082 557 aa8.76□□□□□ -1.01
LIG3-203ENST00000585370 OR2H2O95918 312 aa8.76□□□□□ -1.01
LIG3-203ENST00000585370 HAND1O96004 215 aa8.76□□□□□ -1.01
LIG3-203ENST00000585370 TK1P04183 234 aa8.76□□□□□ -1.01
LIG3-203ENST00000585370 DUSP1P28562 367 aa8.76□□□□□ -1.01
LIG3-203ENST00000585370 CD34P28906 385 aa8.76□□□□□ -1.01
LIG3-203ENST00000585370 NPY4RP50391 375 aa8.76□□□□□ -1.01
LIG3-203ENST00000585370 ZNF81P51508 661 aa8.76□□□□□ -1.01
LIG3-203ENST00000585370 DHRS2Q13268 280 aa8.76□□□□□ -1.01
LIG3-203ENST00000585370 SNTB1Q13884 538 aaKnown RBP8.76□□□□□ -1.01
LIG3-203ENST00000585370 NCMAPQ5T1S8 102 aa8.76□□□□□ -1.01
LIG3-203ENST00000585370 AADACL3Q5VUY0 350 aa8.76□□□□□ -1.01
LIG3-203ENST00000585370 ZNF660Q6AZW8 331 aaPredicted RBP8.76□□□□□ -1.01
LIG3-203ENST00000585370 VHLLQ6RSH7 139 aa8.76□□□□□ -1.01
LIG3-203ENST00000585370 C22orf34Q6ZV56 151 aa8.76□□□□□ -1.01
LIG3-203ENST00000585370 LRP11Q86VZ4 500 aa8.76□□□□□ -1.01
LIG3-203ENST00000585370 GAPTQ8N292 157 aa8.76□□□□□ -1.01
LIG3-203ENST00000585370 OR4A4PQ8NGN8 299 aa8.76□□□□□ -1.01
LIG3-203ENST00000585370 MRPL30Q8TCC3 161 aaKnown RBP8.76□□□□□ -1.01
LIG3-203ENST00000585370 MAFIPQ8WZ33 124 aa8.76□□□□□ -1.01
LIG3-203ENST00000585370 RDH5Q92781 318 aa8.76□□□□□ -1.01
LIG3-203ENST00000585370 MEGF10Q96KG7 1140 aa8.76□□□□□ -1.01
LIG3-203ENST00000585370 SYT3Q9BQG1 590 aa8.76□□□□□ -1.01
LIG3-203ENST00000585370 MRPL37Q9BZE1 423 aaKnown RBP8.76□□□□□ -1.01
LIG3-203ENST00000585370 WDR13Q9H1Z4 485 aa8.76□□□□□ -1.01
LIG3-203ENST00000585370 HEATR1Q9H583 2144 aaKnown RBP8.76□□□□□ -1.01
LIG3-203ENST00000585370 TMEM165Q9HC07 324 aa8.76□□□□□ -1.01
LIG3-203ENST00000585370 DLL4Q9NR61 685 aa8.76□□□□□ -1.01
LIG3-203ENST00000585370 C1orf123Q9NWV4 160 aa8.76□□□□□ -1.01
LIG3-203ENST00000585370 ZNF581Q9P0T4 197 aa8.76□□□□□ -1.01
LIG3-203ENST00000585370 KCNIP3Q9Y2W7 256 aa8.76□□□□□ -1.01
LIG3-203ENST00000585370 hCG_1807616A0A1W2PRN6 198 aa8.75□□□□□ -1.01
LIG3-203ENST00000585370 OR5H14A6NHG9 310 aa8.75□□□□□ -1.01
LIG3-203ENST00000585370 ZSCAN5BA6NJL1 495 aa8.75□□□□□ -1.01
LIG3-203ENST00000585370 SRRM5B3KS81 715 aa8.75□□□□□ -1.01
LIG3-203ENST00000585370 SFT2D2O95562 160 aa8.75□□□□□ -1.01
LIG3-203ENST00000585370 HLA-AP01891 365 aaKnown RBP8.75□□□□□ -1.01
LIG3-203ENST00000585370 CD55P08174 381 aa8.75□□□□□ -1.01
LIG3-203ENST00000585370 ZNF728P0DKX0 622 aa8.75□□□□□ -1.01
LIG3-203ENST00000585370 AKR1C4P17516 323 aa8.75□□□□□ -1.01
LIG3-203ENST00000585370 TNFRSF1AP19438 455 aa8.75□□□□□ -1.01
LIG3-203ENST00000585370 CXCL3P19876 107 aa8.75□□□□□ -1.01
LIG3-203ENST00000585370 FCGR2CP31995 323 aa8.75□□□□□ -1.01
LIG3-203ENST00000585370 HERV-K104P61576 105 aa8.75□□□□□ -1.01
LIG3-203ENST00000585370 PAX5Q02548 391 aa8.75□□□□□ -1.01
LIG3-203ENST00000585370 BSPH1Q075Z2 132 aa8.75□□□□□ -1.01
LIG3-203ENST00000585370 SRSF4Q08170 494 aaKnown RBP8.75□□□□□ -1.01
LIG3-203ENST00000585370 PPP1R1AQ13522 171 aa8.75□□□□□ -1.01
LIG3-203ENST00000585370 KCNJ8Q15842 424 aa8.75□□□□□ -1.01
LIG3-203ENST00000585370 MSMPQ1L6U9 139 aa8.75□□□□□ -1.01
LIG3-203ENST00000585370 PRAMEF6Q5VXH4 476 aa8.75□□□□□ -1.01
LIG3-203ENST00000585370 SLC35E4Q6ICL7 350 aa8.75□□□□□ -1.01
LIG3-203ENST00000585370 ZNF497Q6ZNH5 498 aa8.75□□□□□ -1.01
LIG3-203ENST00000585370 NLRC3Q7RTR2 1065 aa8.75□□□□□ -1.01
LIG3-203ENST00000585370 SGPP2Q8IWX5 399 aa8.75□□□□□ -1.01
LIG3-203ENST00000585370 SLC38A6Q8IZM9 456 aa8.75□□□□□ -1.01
LIG3-203ENST00000585370 FAM185AQ8N0U4 392 aa8.75□□□□□ -1.01
LIG3-203ENST00000585370 BATF2Q8N1L9 274 aa8.75□□□□□ -1.01
LIG3-203ENST00000585370 ZBTB8BQ8NAP8 495 aaPredicted RBP8.75□□□□□ -1.01
LIG3-203ENST00000585370 UXS1Q8NBZ7 420 aa8.75□□□□□ -1.01
LIG3-203ENST00000585370 OR52B4Q8NGK2 314 aa8.75□□□□□ -1.01
LIG3-203ENST00000585370 OR11L1Q8NGX0 322 aa8.75□□□□□ -1.01
LIG3-203ENST00000585370 COQ8AQ8NI60 647 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms