RNA–Protein interactions for RNA: ENST00000583800.1

SMCHD1-210, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 865 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-210ENST00000583800 IRF3Q14653 427 aa6.16□□□□□ -1.42
SMCHD1-210ENST00000583800 ZNF146Q15072 292 aa6.16□□□□□ -1.42
SMCHD1-210ENST00000583800 PTGES3Q15185 160 aaKnown RBP6.16□□□□□ -1.42
SMCHD1-210ENST00000583800 TPTE2P1Q5T6R2 138 aa6.16□□□□□ -1.42
SMCHD1-210ENST00000583800 AADACL4Q5VUY2 407 aa6.16□□□□□ -1.42
SMCHD1-210ENST00000583800 NXNL2Q5VZ03 156 aa6.16□□□□□ -1.42
SMCHD1-210ENST00000583800 OR52W1Q6IF63 320 aa6.16□□□□□ -1.42
SMCHD1-210ENST00000583800 HEPN1Q6WQI6 88 aa6.16□□□□□ -1.42
SMCHD1-210ENST00000583800 OR2W3Q7Z3T1 314 aa6.16□□□□□ -1.42
SMCHD1-210ENST00000583800 RNF144BQ7Z419 303 aa6.16□□□□□ -1.42
SMCHD1-210ENST00000583800 PIGWQ7Z7B1 504 aa6.16□□□□□ -1.42
SMCHD1-210ENST00000583800 RTN4RL2Q86UN3 420 aa6.16□□□□□ -1.42
SMCHD1-210ENST00000583800 CATSPERDQ86XM0 798 aa6.16□□□□□ -1.42
SMCHD1-210ENST00000583800 Q8IYB0 196 aa6.16□□□□□ -1.42
SMCHD1-210ENST00000583800 ENTHD1Q8IYW4 607 aa6.16□□□□□ -1.42
SMCHD1-210ENST00000583800 SPARTQ8N0X7 666 aa6.16□□□□□ -1.42
SMCHD1-210ENST00000583800 FAM58AQ8N1B3 248 aa6.16□□□□□ -1.42
SMCHD1-210ENST00000583800 TCEANCQ8N8B7 351 aa6.16□□□□□ -1.42
SMCHD1-210ENST00000583800 OR51D1Q8NGF3 324 aa6.16□□□□□ -1.42
SMCHD1-210ENST00000583800 NSL1Q96IY1 281 aa6.16□□□□□ -1.42
SMCHD1-210ENST00000583800 NOL4LQ96MY1 436 aaPredicted RBP6.16□□□□□ -1.42
SMCHD1-210ENST00000583800 DUX3Q96PT4 197 aa6.16□□□□□ -1.42
SMCHD1-210ENST00000583800 MNTQ99583 582 aa6.16□□□□□ -1.42
SMCHD1-210ENST00000583800 GAL3ST2Q9H3Q3 398 aa6.16□□□□□ -1.42
SMCHD1-210ENST00000583800 PAPOLBQ9NRJ5 636 aaKnown RBP6.16□□□□□ -1.42
SMCHD1-210ENST00000583800 GSTK1Q9Y2Q3 226 aa6.16□□□□□ -1.42
SMCHD1-210ENST00000583800 MOB4Q9Y3A3 225 aa6.16□□□□□ -1.42
SMCHD1-210ENST00000583800 HSPE1-MOB4S4R3N1 261 aa6.16□□□□□ -1.42
SMCHD1-210ENST00000583800 BIRC6Q9NR09 4857 aa6.16□□□□□ -1.42
SMCHD1-210ENST00000583800 IGKV1-9A0A0C4DH69 117 aa6.15□□□□□ -1.42
SMCHD1-210ENST00000583800 IGKV1-12A0A0C4DH73 117 aa6.15□□□□□ -1.42
SMCHD1-210ENST00000583800 LOC107986453A0A1B0GWG9 222 aa6.15□□□□□ -1.42
SMCHD1-210ENST00000583800 H0YHG0 523 aa6.15□□□□□ -1.42
SMCHD1-210ENST00000583800 LY6LH3BQJ8 138 aa6.15□□□□□ -1.42
SMCHD1-210ENST00000583800 BUB1B-PAK6H3BSN5 160 aa6.15□□□□□ -1.42
SMCHD1-210ENST00000583800 TOR1AO14656 332 aa6.15□□□□□ -1.42
SMCHD1-210ENST00000583800 MITFO75030 526 aaPredicted RBP6.15□□□□□ -1.42
SMCHD1-210ENST00000583800 FKBP6O75344 327 aa6.15□□□□□ -1.42
SMCHD1-210ENST00000583800 OR2H2O95918 312 aa6.15□□□□□ -1.42
SMCHD1-210ENST00000583800 IGKV1D-12P01611 117 aa6.15□□□□□ -1.42
SMCHD1-210ENST00000583800 SNRNP70P08621 437 aaKnown RBP6.15□□□□□ -1.42
SMCHD1-210ENST00000583800 CD34P28906 385 aa6.15□□□□□ -1.42
SMCHD1-210ENST00000583800 PTGFRP43088 359 aa6.15□□□□□ -1.42
SMCHD1-210ENST00000583800 DAPP51397 102 aa6.15□□□□□ -1.42
SMCHD1-210ENST00000583800 ATP1B3P54709 279 aa6.15□□□□□ -1.42
SMCHD1-210ENST00000583800 AESQ08117 197 aa6.15□□□□□ -1.42
SMCHD1-210ENST00000583800 MED22Q15528 200 aa6.15□□□□□ -1.42
SMCHD1-210ENST00000583800 SPIN3Q5JUX0 258 aa6.15□□□□□ -1.42
SMCHD1-210ENST00000583800 AQP12AQ8IXF9 295 aa6.15□□□□□ -1.42
SMCHD1-210ENST00000583800 RDH10Q8IZV5 341 aa6.15□□□□□ -1.42
SMCHD1-210ENST00000583800 KLHL30-AS1Q8NEE0 82 aa6.15□□□□□ -1.42
SMCHD1-210ENST00000583800 NUDT10Q8NFP7 164 aa6.15□□□□□ -1.42
SMCHD1-210ENST00000583800 TMEM163Q8TC26 289 aa6.15□□□□□ -1.42
SMCHD1-210ENST00000583800 TFAP2CQ92754 450 aa6.15□□□□□ -1.42
SMCHD1-210ENST00000583800 RFT1Q96AA3 541 aa6.15□□□□□ -1.42
SMCHD1-210ENST00000583800 ADAT3Q96EY9 351 aaPredicted RBP6.15□□□□□ -1.42
SMCHD1-210ENST00000583800 NUDT11Q96G61 164 aa6.15□□□□□ -1.42
SMCHD1-210ENST00000583800 GPHA2Q96T91 129 aa6.15□□□□□ -1.42
SMCHD1-210ENST00000583800 P2RX4Q99571 388 aa6.15□□□□□ -1.42
SMCHD1-210ENST00000583800 MCRIP2Q9BUT9 160 aaKnown RBP6.15□□□□□ -1.42
SMCHD1-210ENST00000583800 PRRG3Q9BZD7 231 aa6.15□□□□□ -1.42
SMCHD1-210ENST00000583800 SEBOXQ9HB31 216 aaPredicted RBP6.15□□□□□ -1.42
SMCHD1-210ENST00000583800 EXOSC4Q9NPD3 245 aaKnown RBP6.15□□□□□ -1.42
SMCHD1-210ENST00000583800 TAS2R3Q9NYW6 316 aa6.15□□□□□ -1.42
SMCHD1-210ENST00000583800 GLS2Q9UI32 602 aa6.15□□□□□ -1.42
SMCHD1-210ENST00000583800 LINC00527Q9UJ94 153 aa6.15□□□□□ -1.42
SMCHD1-210ENST00000583800 U3KQK5 164 aa6.15□□□□□ -1.42
SMCHD1-210ENST00000583800 A0A1W2PQL4 384 aaPredicted RBP6.14□□□□□ -1.43
SMCHD1-210ENST00000583800 ODAMA1E959 279 aa6.14□□□□□ -1.43
SMCHD1-210ENST00000583800 TEX22C9J3V5 150 aa6.14□□□□□ -1.43
SMCHD1-210ENST00000583800 M0QZK8 103 aa6.14□□□□□ -1.43
SMCHD1-210ENST00000583800 CYB5AP00167 134 aa6.14□□□□□ -1.43
SMCHD1-210ENST00000583800 SERPINA3P01011 423 aa6.14□□□□□ -1.43
SMCHD1-210ENST00000583800 IGHV3-7P01780 117 aa6.14□□□□□ -1.43
SMCHD1-210ENST00000583800 FAM90A13PP0C7W8 464 aa6.14□□□□□ -1.43
SMCHD1-210ENST00000583800 FAM90A24PP0C7X0 464 aa6.14□□□□□ -1.43
SMCHD1-210ENST00000583800 T-ENOLP0DO92 83 aa6.14□□□□□ -1.43
SMCHD1-210ENST00000583800 ZNF44P15621 663 aa6.14□□□□□ -1.43
SMCHD1-210ENST00000583800 CALB2P22676 271 aa6.14□□□□□ -1.43
SMCHD1-210ENST00000583800 NFYBP25208 207 aa6.14□□□□□ -1.43
SMCHD1-210ENST00000583800 LMO1P25800 156 aa6.14□□□□□ -1.43
SMCHD1-210ENST00000583800 EPHA2P29317 976 aa6.14□□□□□ -1.43
SMCHD1-210ENST00000583800 CEACAM3P40198 252 aa6.14□□□□□ -1.43
SMCHD1-210ENST00000583800 MYCNOSP40205 109 aa6.14□□□□□ -1.43
SMCHD1-210ENST00000583800 MNDAP41218 407 aa6.14□□□□□ -1.43
SMCHD1-210ENST00000583800 KIR3DL2P43630 455 aa6.14□□□□□ -1.43
SMCHD1-210ENST00000583800 RBP2P50120 134 aa6.14□□□□□ -1.43
SMCHD1-210ENST00000583800 LUMP51884 338 aaPredicted RBP6.14□□□□□ -1.43
SMCHD1-210ENST00000583800 MTCP1P56278 107 aa6.14□□□□□ -1.43
SMCHD1-210ENST00000583800 RAB25P57735 213 aa6.14□□□□□ -1.43
SMCHD1-210ENST00000583800 FAM3BP58499 235 aaPredicted RBP6.14□□□□□ -1.43
SMCHD1-210ENST00000583800 CDC42P60953 191 aa6.14□□□□□ -1.43
SMCHD1-210ENST00000583800 DGCR2P98153 550 aa6.14□□□□□ -1.43
SMCHD1-210ENST00000583800 DIAPH2-AS1Q14236 149 aa6.14□□□□□ -1.43
SMCHD1-210ENST00000583800 KPNB1Q14974 876 aaKnown RBP6.14□□□□□ -1.43
SMCHD1-210ENST00000583800 ATXN7L3Q14CW9 347 aaPredicted RBP6.14□□□□□ -1.43
SMCHD1-210ENST00000583800 C17orf58Q2M2W7 97 aa6.14□□□□□ -1.43
SMCHD1-210ENST00000583800 KRBOX4Q5JUW0 171 aa6.14□□□□□ -1.43
SMCHD1-210ENST00000583800 C12orf73Q69YU5 71 aa6.14□□□□□ -1.43
SMCHD1-210ENST00000583800 CCDC144NLQ6NUI1 221 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms