RNA–Protein interactions for RNA: ENST00000583380.5

SKA2-207, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 5 BASIC

Gene SKA2, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-207ENST00000583380 OR5C1Q8NGR4 320 aa8.18□□□□□ -1.1
SKA2-207ENST00000583380 OR52N5Q8NH56 324 aa8.18□□□□□ -1.1
SKA2-207ENST00000583380 MRPL30Q8TCC3 161 aaKnown RBP8.18□□□□□ -1.1
SKA2-207ENST00000583380 HOXB13Q92826 284 aaPredicted RBP8.18□□□□□ -1.1
SKA2-207ENST00000583380 C10orf35Q96D05 121 aa8.18□□□□□ -1.1
SKA2-207ENST00000583380 MS4A4AQ96JQ5 239 aa8.18□□□□□ -1.1
SKA2-207ENST00000583380 SMIM14Q96QK8 99 aa8.18□□□□□ -1.1
SKA2-207ENST00000583380 KLHDC3Q9BQ90 382 aa8.18□□□□□ -1.1
SKA2-207ENST00000583380 TTTY10Q9BZA0 68 aa8.18□□□□□ -1.1
SKA2-207ENST00000583380 ZNF286AQ9HBT8 521 aa8.18□□□□□ -1.1
SKA2-207ENST00000583380 CGGBP1Q9UFW8 167 aaPredicted RBP8.18□□□□□ -1.1
SKA2-207ENST00000583380 TRAPPC2LQ9UL33 140 aa8.18□□□□□ -1.1
SKA2-207ENST00000583380 FCF1Q9Y324 198 aaKnown RBP8.18□□□□□ -1.1
SKA2-207ENST00000583380 COL16A1Q07092 1604 aaPredicted RBP8.18□□□□□ -1.1
SKA2-207ENST00000583380 THSD7AQ9UPZ6 1657 aa8.18□□□□□ -1.1
SKA2-207ENST00000583380 HELZP42694 1942 aaKnown RBP8.17□□□□□ -1.1
SKA2-207ENST00000583380 CTXND1A0A1B0GTU2 59 aa8.17□□□□□ -1.1
SKA2-207ENST00000583380 KIAA1324LA8MWY0 1029 aaPredicted RBP8.17□□□□□ -1.1
SKA2-207ENST00000583380 WNT10BO00744 389 aa8.17□□□□□ -1.1
SKA2-207ENST00000583380 MT-ATP6P00846 226 aa8.17□□□□□ -1.1
SKA2-207ENST00000583380 FBXO45P0C2W1 286 aa8.17□□□□□ -1.1
SKA2-207ENST00000583380 CORO1AP31146 461 aaKnown RBP8.17□□□□□ -1.1
SKA2-207ENST00000583380 GNG4P50150 75 aa8.17□□□□□ -1.1
SKA2-207ENST00000583380 CTXN1P60606 82 aa8.17□□□□□ -1.1
SKA2-207ENST00000583380 ID3Q02535 119 aa8.17□□□□□ -1.1
SKA2-207ENST00000583380 HIST1H1AQ02539 215 aaPredicted RBP8.17□□□□□ -1.1
SKA2-207ENST00000583380 TCEA2Q15560 299 aa8.17□□□□□ -1.1
SKA2-207ENST00000583380 ZNF141Q15928 474 aa8.17□□□□□ -1.1
SKA2-207ENST00000583380 ZNF658BQ4V348 819 aaPredicted RBP8.17□□□□□ -1.1
SKA2-207ENST00000583380 C1QL3Q5VWW1 255 aa8.17□□□□□ -1.1
SKA2-207ENST00000583380 WBP2NLQ6ICG8 309 aa8.17□□□□□ -1.1
SKA2-207ENST00000583380 RD3Q7Z3Z2 195 aa8.17□□□□□ -1.1
SKA2-207ENST00000583380 PRRT2Q7Z6L0 340 aaPredicted RBP8.17□□□□□ -1.1
SKA2-207ENST00000583380 CMTM8Q8IZV2 173 aa8.17□□□□□ -1.1
SKA2-207ENST00000583380 TMEM256Q8N2U0 113 aa8.17□□□□□ -1.1
SKA2-207ENST00000583380 ST6GALNAC3Q8NDV1 305 aa8.17□□□□□ -1.1
SKA2-207ENST00000583380 OR2AJ1Q8NGZ0 328 aa8.17□□□□□ -1.1
SKA2-207ENST00000583380 NKD1Q969G9 470 aa8.17□□□□□ -1.1
SKA2-207ENST00000583380 TSSK2Q96PF2 358 aa8.17□□□□□ -1.1
SKA2-207ENST00000583380 GPER1Q99527 375 aa8.17□□□□□ -1.1
SKA2-207ENST00000583380 TM2D1Q9BX74 207 aa8.17□□□□□ -1.1
SKA2-207ENST00000583380 ULBP2Q9BZM5 246 aa8.17□□□□□ -1.1
SKA2-207ENST00000583380 ZMAT3Q9HA38 289 aaKnown RBP8.17□□□□□ -1.1
SKA2-207ENST00000583380 NRN1Q9NPD7 142 aa8.17□□□□□ -1.1
SKA2-207ENST00000583380 HS3ST2Q9Y278 367 aa8.17□□□□□ -1.1
SKA2-207ENST00000583380 POLR1DQ9Y2S0 133 aa8.17□□□□□ -1.1
SKA2-207ENST00000583380 KCNE3Q9Y6H6 103 aa8.17□□□□□ -1.1
SKA2-207ENST00000583380 LOC107986453A0A1B0GWG9 222 aa8.16□□□□□ -1.1
SKA2-207ENST00000583380 A0A1W2PNV4 684 aa8.16□□□□□ -1.1
SKA2-207ENST00000583380 BLACEA4D250 179 aa8.16□□□□□ -1.1
SKA2-207ENST00000583380 CASTOR2A6NHX0 329 aa8.16□□□□□ -1.1
SKA2-207ENST00000583380 ZNF878C9JN71 531 aa8.16□□□□□ -1.1
SKA2-207ENST00000583380 H3BRM9 83 aa8.16□□□□□ -1.1
SKA2-207ENST00000583380 TAX1BP3O14907 124 aa8.16□□□□□ -1.1
SKA2-207ENST00000583380 TBL1XO60907 577 aa8.16□□□□□ -1.1
SKA2-207ENST00000583380 ZNF324O75467 553 aaPredicted RBP8.16□□□□□ -1.1
SKA2-207ENST00000583380 RAD51DO75771 328 aa8.16□□□□□ -1.1
SKA2-207ENST00000583380 TRAPPC6AO75865 159 aa8.16□□□□□ -1.1
SKA2-207ENST00000583380 SERF1AO75920 110 aa8.16□□□□□ -1.1
SKA2-207ENST00000583380 STC2O76061 302 aa8.16□□□□□ -1.1
SKA2-207ENST00000583380 ZNF205O95201 554 aa8.16□□□□□ -1.1
SKA2-207ENST00000583380 HAND1O96004 215 aa8.16□□□□□ -1.1
SKA2-207ENST00000583380 TIMP1P01033 207 aa8.16□□□□□ -1.1
SKA2-207ENST00000583380 HLA-DQA1P01909 254 aa8.16□□□□□ -1.1
SKA2-207ENST00000583380 FTH1P19P0C7X4 201 aa8.16□□□□□ -1.1
SKA2-207ENST00000583380 ZNF823P16415 610 aa8.16□□□□□ -1.1
SKA2-207ENST00000583380 ZNF20P17024 532 aa8.16□□□□□ -1.1
SKA2-207ENST00000583380 PMCHP20382 165 aa8.16□□□□□ -1.1
SKA2-207ENST00000583380 VDAC1P21796 283 aa8.16□□□□□ -1.1
SKA2-207ENST00000583380 AMTP48728 403 aa8.16□□□□□ -1.1
SKA2-207ENST00000583380 PGFP49763 221 aa8.16□□□□□ -1.1
SKA2-207ENST00000583380 ASCL1P50553 236 aa8.16□□□□□ -1.1
SKA2-207ENST00000583380 PRDX1Q06830 199 aaKnown RBP8.16□□□□□ -1.1
SKA2-207ENST00000583380 SLAQ13239 276 aa8.16□□□□□ -1.1
SKA2-207ENST00000583380 UNC119Q13432 240 aa8.16□□□□□ -1.1
SKA2-207ENST00000583380 SRSF7Q16629 238 aaKnown RBP eCLIP8.16□□□□□ -1.1
SKA2-207ENST00000583380 SLC25A34Q6PIV7 304 aa8.16□□□□□ -1.1
SKA2-207ENST00000583380 SYT13Q7L8C5 426 aa8.16□□□□□ -1.1
SKA2-207ENST00000583380 MRPL21Q7Z2W9 205 aaKnown RBP8.16□□□□□ -1.1
SKA2-207ENST00000583380 HEATR5AQ86XA9 2040 aa8.16□□□□□ -1.1
SKA2-207ENST00000583380 TMEM123Q8N131 208 aa8.16□□□□□ -1.1
SKA2-207ENST00000583380 LRRC75AQ8NAA5 344 aa8.16□□□□□ -1.1
SKA2-207ENST00000583380 STXBP6Q8NFX7 210 aa8.16□□□□□ -1.1
SKA2-207ENST00000583380 LHX4Q969G2 390 aa8.16□□□□□ -1.1
SKA2-207ENST00000583380 POM121L2Q96KW2 1035 aa8.16□□□□□ -1.1
SKA2-207ENST00000583380 WDR61Q9GZS3 305 aaKnown RBP8.16□□□□□ -1.1
SKA2-207ENST00000583380 G6PC2Q9NQR9 355 aa8.16□□□□□ -1.1
SKA2-207ENST00000583380 KCNIP2Q9NS61 270 aa8.16□□□□□ -1.1
SKA2-207ENST00000583380 PLEKHJ1Q9NW61 149 aa8.16□□□□□ -1.1
SKA2-207ENST00000583380 B4GALT6Q9UBX8 382 aa8.16□□□□□ -1.1
SKA2-207ENST00000583380 LSM7Q9UK45 103 aaKnown RBP8.16□□□□□ -1.1
SKA2-207ENST00000583380 RNF115Q9Y4L5 304 aa8.16□□□□□ -1.1
SKA2-207ENST00000583380 PLXNA2O75051 1894 aa8.15□□□□□ -1.1
SKA2-207ENST00000583380 A0A0G2JMM0 328 aa8.15□□□□□ -1.1
SKA2-207ENST00000583380 A0A1W2PPB8 328 aa8.15□□□□□ -1.1
SKA2-207ENST00000583380 LRRC3CA6NJW4 275 aa8.15□□□□□ -1.1
SKA2-207ENST00000583380 KIR3DP1A8MWS1 328 aa8.15□□□□□ -1.1
SKA2-207ENST00000583380 GRXCR1A8MXD5 290 aa8.15□□□□□ -1.1
SKA2-207ENST00000583380 H0YJW9 148 aa8.15□□□□□ -1.1
SKA2-207ENST00000583380 KLRC4-KLRK1H3BQV0 150 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms