RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 SPARTQ8N0X7 666 aa10.23□□□□□ -0.77
SMARCE1-218ENST00000582955 TMEM104Q8NE00 496 aa10.23□□□□□ -0.77
SMARCE1-218ENST00000582955 OR13A1Q8NGR1 328 aa10.23□□□□□ -0.77
SMARCE1-218ENST00000582955 OR5R1Q8NH85 324 aa10.23□□□□□ -0.77
SMARCE1-218ENST00000582955 NDNFQ8TB73 568 aa10.23□□□□□ -0.77
SMARCE1-218ENST00000582955 MRGPRDQ8TDS7 321 aa10.23□□□□□ -0.77
SMARCE1-218ENST00000582955 AJUBAQ96IF1 538 aa10.23□□□□□ -0.77
SMARCE1-218ENST00000582955 CST11Q9H112 138 aa10.23□□□□□ -0.77
SMARCE1-218ENST00000582955 SPACA1Q9HBV2 294 aa10.23□□□□□ -0.77
SMARCE1-218ENST00000582955 CALYQ9NYX4 217 aa10.23□□□□□ -0.77
SMARCE1-218ENST00000582955 VPREB3Q9UKI3 123 aa10.23□□□□□ -0.77
SMARCE1-218ENST00000582955 KIAA2026Q5HYC2 2103 aa10.22□□□□□ -0.77
SMARCE1-218ENST00000582955 TRAV39A0A0B4J263 110 aa10.22□□□□□ -0.77
SMARCE1-218ENST00000582955 KBTBD11-OT1A0A1B0GTJ5 212 aa10.22□□□□□ -0.77
SMARCE1-218ENST00000582955 TMEM30CPA0ZSE6 113 aa10.22□□□□□ -0.77
SMARCE1-218ENST00000582955 MCRIP1C9JLW8 97 aa10.22□□□□□ -0.77
SMARCE1-218ENST00000582955 NFYBP25208 207 aa10.22□□□□□ -0.77
SMARCE1-218ENST00000582955 HTR2CP28335 458 aa10.22□□□□□ -0.77
SMARCE1-218ENST00000582955 GDNFP39905 211 aa10.22□□□□□ -0.77
SMARCE1-218ENST00000582955 RAG2P55895 527 aa10.22□□□□□ -0.77
SMARCE1-218ENST00000582955 FAM189A2Q15884 450 aa10.22□□□□□ -0.77
SMARCE1-218ENST00000582955 SSX2Q16385 188 aa10.22□□□□□ -0.77
SMARCE1-218ENST00000582955 LY6EQ16553 131 aa10.22□□□□□ -0.77
SMARCE1-218ENST00000582955 LTC4SQ16873 150 aa10.22□□□□□ -0.77
SMARCE1-218ENST00000582955 C17orf58Q2M2W7 97 aa10.22□□□□□ -0.77
SMARCE1-218ENST00000582955 C1orf100Q5SVJ3 147 aa10.22□□□□□ -0.77
SMARCE1-218ENST00000582955 SLC35E4Q6ICL7 350 aa10.22□□□□□ -0.77
SMARCE1-218ENST00000582955 OR10K2Q6IF99 312 aa10.22□□□□□ -0.77
SMARCE1-218ENST00000582955 RAB12Q6IQ22 244 aa10.22□□□□□ -0.77
SMARCE1-218ENST00000582955 GDPGP1Q6ZNW5 385 aa10.22□□□□□ -0.77
SMARCE1-218ENST00000582955 ABHD12Q8N2K0 398 aa10.22□□□□□ -0.77
SMARCE1-218ENST00000582955 OR6M1Q8NGM8 313 aa10.22□□□□□ -0.77
SMARCE1-218ENST00000582955 MALSU1Q96EH3 234 aa10.22□□□□□ -0.77
SMARCE1-218ENST00000582955 Q96M66 194 aa10.22□□□□□ -0.77
SMARCE1-218ENST00000582955 MEGF9Q9H1U4 602 aa10.22□□□□□ -0.77
SMARCE1-218ENST00000582955 NCOR1P1Q9H4R4 102 aa10.22□□□□□ -0.77
SMARCE1-218ENST00000582955 PLGRKTQ9HBL7 147 aa10.22□□□□□ -0.77
SMARCE1-218ENST00000582955 NDUFB11Q9NX14 153 aa10.22□□□□□ -0.77
SMARCE1-218ENST00000582955 C1RLQ9NZP8 487 aa10.22□□□□□ -0.77
SMARCE1-218ENST00000582955 AK6Q9Y3D8 172 aaKnown RBP10.22□□□□□ -0.77
SMARCE1-218ENST00000582955 LRRC42Q9Y546 428 aa10.22□□□□□ -0.77
SMARCE1-218ENST00000582955 PEX16Q9Y5Y5 336 aa10.22□□□□□ -0.77
SMARCE1-218ENST00000582955 FAM90A8PA6NJQ4 464 aa10.21□□□□□ -0.77
SMARCE1-218ENST00000582955 CCRL2O00421 344 aa10.21□□□□□ -0.77
SMARCE1-218ENST00000582955 TOR1AO14656 332 aa10.21□□□□□ -0.77
SMARCE1-218ENST00000582955 SLC22A1O15245 554 aa10.21□□□□□ -0.77
SMARCE1-218ENST00000582955 IL1AP01583 271 aa10.21□□□□□ -0.77
SMARCE1-218ENST00000582955 MDKP21741 143 aaPredicted RBP10.21□□□□□ -0.77
SMARCE1-218ENST00000582955 CFPP27918 469 aa10.21□□□□□ -0.77
SMARCE1-218ENST00000582955 RPL15P61313 204 aaKnown RBP10.21□□□□□ -0.77
SMARCE1-218ENST00000582955 PAX5Q02548 391 aa10.21□□□□□ -0.77
SMARCE1-218ENST00000582955 RBM39Q14498 530 aaKnown RBP10.21□□□□□ -0.77
SMARCE1-218ENST00000582955 MINOS1Q5TGZ0 78 aa10.21□□□□□ -0.77
SMARCE1-218ENST00000582955 UBE2UQ5VVX9 321 aa10.21□□□□□ -0.77
SMARCE1-218ENST00000582955 DHRS7BQ6IAN0 325 aaPredicted RBP10.21□□□□□ -0.77
SMARCE1-218ENST00000582955 ZNF773Q6PK81 442 aa10.21□□□□□ -0.77
SMARCE1-218ENST00000582955 RTN4RL2Q86UN3 420 aa10.21□□□□□ -0.77
SMARCE1-218ENST00000582955 OR4F5Q8NH21 305 aa10.21□□□□□ -0.77
SMARCE1-218ENST00000582955 RFESDQ8TAC1 157 aa10.21□□□□□ -0.77
SMARCE1-218ENST00000582955 ZNF596Q8TC21 504 aa10.21□□□□□ -0.77
SMARCE1-218ENST00000582955 CCDC107Q8WV48 283 aa10.21□□□□□ -0.77
SMARCE1-218ENST00000582955 FCGR1BQ92637 280 aa10.21□□□□□ -0.77
SMARCE1-218ENST00000582955 KCNK15Q9H427 330 aa10.21□□□□□ -0.77
SMARCE1-218ENST00000582955 ZNF286AQ9HBT8 521 aa10.21□□□□□ -0.77
SMARCE1-218ENST00000582955 ABCB10Q9NRK6 738 aa10.21□□□□□ -0.77
SMARCE1-218ENST00000582955 ETAA1Q9NY74 926 aa10.21□□□□□ -0.77
SMARCE1-218ENST00000582955 IDI2-AS1Q9NZ38 188 aa10.21□□□□□ -0.77
SMARCE1-218ENST00000582955 RCC2Q9P258 522 aaKnown RBP10.21□□□□□ -0.77
SMARCE1-218ENST00000582955 HILPDAQ9Y5L2 63 aa10.21□□□□□ -0.77
SMARCE1-218ENST00000582955 MINOS1-NBL1R4GNA1 71 aa10.21□□□□□ -0.77
SMARCE1-218ENST00000582955 FAM90A10PA6NDY2 464 aa10.2□□□□□ -0.78
SMARCE1-218ENST00000582955 FAM90A18PA6NE21 464 aa10.2□□□□□ -0.78
SMARCE1-218ENST00000582955 FAM90A16PA6NEW6 464 aa10.2□□□□□ -0.78
SMARCE1-218ENST00000582955 FAM90A20PA6NIJ5 464 aa10.2□□□□□ -0.78
SMARCE1-218ENST00000582955 FAM90A7PA6NKC0 464 aa10.2□□□□□ -0.78
SMARCE1-218ENST00000582955 FAM90A22PA8MWA6 464 aa10.2□□□□□ -0.78
SMARCE1-218ENST00000582955 FAM90A12PA8MX19 464 aa10.2□□□□□ -0.78
SMARCE1-218ENST00000582955 FAM90A5PA8MXJ8 464 aa10.2□□□□□ -0.78
SMARCE1-218ENST00000582955 FAM90A23PA8MXZ1 464 aa10.2□□□□□ -0.78
SMARCE1-218ENST00000582955 H3BUI4 141 aa10.2□□□□□ -0.78
SMARCE1-218ENST00000582955 AIPO00170 330 aa10.2□□□□□ -0.78
SMARCE1-218ENST00000582955 BPNT1O95861 308 aa10.2□□□□□ -0.78
SMARCE1-218ENST00000582955 FAM90A15PP0C7V4 464 aa10.2□□□□□ -0.78
SMARCE1-218ENST00000582955 FAM90A13PP0C7W8 464 aa10.2□□□□□ -0.78
SMARCE1-218ENST00000582955 FAM90A14PP0C7W9 464 aa10.2□□□□□ -0.78
SMARCE1-218ENST00000582955 FAM90A24PP0C7X0 464 aa10.2□□□□□ -0.78
SMARCE1-218ENST00000582955 CGB3P0DN86 165 aa10.2□□□□□ -0.78
SMARCE1-218ENST00000582955 CGB7P0DN87 165 aa10.2□□□□□ -0.78
SMARCE1-218ENST00000582955 VSIG8P0DPA2 414 aa10.2□□□□□ -0.78
SMARCE1-218ENST00000582955 FUT3P21217 361 aa10.2□□□□□ -0.78
SMARCE1-218ENST00000582955 HTR1DP28221 377 aa10.2□□□□□ -0.78
SMARCE1-218ENST00000582955 SSTR5P35346 364 aa10.2□□□□□ -0.78
SMARCE1-218ENST00000582955 RELBQ01201 579 aa10.2□□□□□ -0.78
SMARCE1-218ENST00000582955 ANK2Q01484 3957 aa10.2□□□□□ -0.78
SMARCE1-218ENST00000582955 P2RY14Q15391 338 aa10.2□□□□□ -0.78
SMARCE1-218ENST00000582955 RAB11BQ15907 218 aa10.2□□□□□ -0.78
SMARCE1-218ENST00000582955 AANATQ16613 207 aa10.2□□□□□ -0.78
SMARCE1-218ENST00000582955 NKAPLQ5M9Q1 402 aa10.2□□□□□ -0.78
SMARCE1-218ENST00000582955 LDLRAD2Q5SZI1 272 aa10.2□□□□□ -0.78
SMARCE1-218ENST00000582955 ZNF497Q6ZNH5 498 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms