RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 OCSTAMPQ9BR26 566 aa11.28□□□□□ -0.6
CSNK1D-220ENST00000581737 NICN1Q9BSH3 213 aa11.28□□□□□ -0.6
CSNK1D-220ENST00000581737 PECRQ9BY49 303 aa11.28□□□□□ -0.6
CSNK1D-220ENST00000581737 SLC2A8Q9NY64 477 aa11.28□□□□□ -0.6
CSNK1D-220ENST00000581737 CR1P17927 2039 aa11.28□□□□□ -0.6
CSNK1D-220ENST00000581737 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.27□□□□□ -0.66e-18■■■■□ 23.8
CSNK1D-220ENST00000581737 A0A096LNT2 108 aa11.27□□□□□ -0.61
CSNK1D-220ENST00000581737 MEIS3P1A6NDR6 274 aa11.27□□□□□ -0.61
CSNK1D-220ENST00000581737 OOEPA6NGQ2 149 aa11.27□□□□□ -0.61
CSNK1D-220ENST00000581737 ARPC1BO15143 372 aaKnown RBP11.27□□□□□ -0.61
CSNK1D-220ENST00000581737 SOCS1O15524 211 aa11.27□□□□□ -0.61
CSNK1D-220ENST00000581737 NDUFA2O43678 99 aa11.27□□□□□ -0.61
CSNK1D-220ENST00000581737 CREBL2O60519 120 aaPredicted RBP11.27□□□□□ -0.61
CSNK1D-220ENST00000581737 PDCD6O75340 191 aa11.27□□□□□ -0.61
CSNK1D-220ENST00000581737 LHBP01229 141 aa11.27□□□□□ -0.61
CSNK1D-220ENST00000581737 IL5P05113 134 aa11.27□□□□□ -0.61
CSNK1D-220ENST00000581737 ACAA1P09110 424 aaPredicted RBP11.27□□□□□ -0.61
CSNK1D-220ENST00000581737 MUC1P15941 1255 aaPredicted RBP11.27□□□□□ -0.61
CSNK1D-220ENST00000581737 NAT1P18440 290 aa11.27□□□□□ -0.61
CSNK1D-220ENST00000581737 AMY2BP19961 511 aa11.27□□□□□ -0.61
CSNK1D-220ENST00000581737 DTYMKP23919 212 aa11.27□□□□□ -0.61
CSNK1D-220ENST00000581737 EIF2B2P49770 351 aaKnown RBP11.27□□□□□ -0.61
CSNK1D-220ENST00000581737 RBM11P57052 281 aaKnown RBP11.27□□□□□ -0.61
CSNK1D-220ENST00000581737 TAS2R31P59538 309 aa11.27□□□□□ -0.61
CSNK1D-220ENST00000581737 FGF12P61328 243 aa11.27□□□□□ -0.61
CSNK1D-220ENST00000581737 IL13RA2Q14627 380 aa11.27□□□□□ -0.61
CSNK1D-220ENST00000581737 MICBQ29980 383 aa11.27□□□□□ -0.61
CSNK1D-220ENST00000581737 NKAPLQ5M9Q1 402 aa11.27□□□□□ -0.61
CSNK1D-220ENST00000581737 GCSAMQ8N6F7 178 aa11.27□□□□□ -0.61
CSNK1D-220ENST00000581737 POC1AQ8NBT0 407 aa11.27□□□□□ -0.61
CSNK1D-220ENST00000581737 GIMAP1Q8WWP7 306 aa11.27□□□□□ -0.61
CSNK1D-220ENST00000581737 SNAPC3Q92966 411 aa11.27□□□□□ -0.61
CSNK1D-220ENST00000581737 OR51J1Q9H342 316 aa11.27□□□□□ -0.61
CSNK1D-220ENST00000581737 ZMAT3Q9HA38 289 aaKnown RBP11.27□□□□□ -0.61
CSNK1D-220ENST00000581737 RASL12Q9NYN1 266 aa11.27□□□□□ -0.61
CSNK1D-220ENST00000581737 DNAJB11Q9UBS4 358 aa11.27□□□□□ -0.61
CSNK1D-220ENST00000581737 ANAPC10Q9UM13 185 aa11.27□□□□□ -0.61
CSNK1D-220ENST00000581737 PCDHB10Q9UN67 800 aa11.27□□□□□ -0.61
CSNK1D-220ENST00000581737 ST3GAL6Q9Y274 331 aa11.27□□□□□ -0.61
CSNK1D-220ENST00000581737 IGKV1-27A0A075B6S5 117 aa11.26□□□□□ -0.61
CSNK1D-220ENST00000581737 A0A0A6YYD4 124 aa11.26□□□□□ -0.61
CSNK1D-220ENST00000581737 SNRPGP15A8MWD9 76 aa11.26□□□□□ -0.61
CSNK1D-220ENST00000581737 SSNA1O43805 119 aa11.26□□□□□ -0.61
CSNK1D-220ENST00000581737 ANGPTL7O43827 346 aa11.26□□□□□ -0.61
CSNK1D-220ENST00000581737 NOS1APO75052 506 aaPredicted RBP11.26□□□□□ -0.61
CSNK1D-220ENST00000581737 IFNA2P01563 188 aa11.26□□□□□ -0.61
CSNK1D-220ENST00000581737 RLN1P04808 185 aa11.26□□□□□ -0.61
CSNK1D-220ENST00000581737 GLAP06280 429 aa11.26□□□□□ -0.61
CSNK1D-220ENST00000581737 FCER2P06734 321 aa11.26□□□□□ -0.61
CSNK1D-220ENST00000581737 PGA5P0DJD9 388 aa11.26□□□□□ -0.61
CSNK1D-220ENST00000581737 FUT3P21217 361 aa11.26□□□□□ -0.61
CSNK1D-220ENST00000581737 CD80P33681 288 aa11.26□□□□□ -0.61
CSNK1D-220ENST00000581737 GZMKP49863 264 aa11.26□□□□□ -0.61
CSNK1D-220ENST00000581737 MECP2P51608 486 aaKnown RBP11.26□□□□□ -0.61
CSNK1D-220ENST00000581737 SMIM21Q3B7S5 101 aa11.26□□□□□ -0.61
CSNK1D-220ENST00000581737 VAX1Q5SQQ9 334 aa11.26□□□□□ -0.61
CSNK1D-220ENST00000581737 TEX36Q5VZQ5 186 aa11.26□□□□□ -0.61
CSNK1D-220ENST00000581737 C11orf88Q6PI97 169 aa11.26□□□□□ -0.61
CSNK1D-220ENST00000581737 IDO2Q6ZQW0 420 aa11.26□□□□□ -0.61
CSNK1D-220ENST00000581737 NLRC3Q7RTR2 1065 aa11.26□□□□□ -0.61
CSNK1D-220ENST00000581737 FAM90A1Q86YD7 464 aa11.26□□□□□ -0.61
CSNK1D-220ENST00000581737 CALHM1Q8IU99 346 aa11.26□□□□□ -0.61
CSNK1D-220ENST00000581737 ZDHHC22Q8N966 263 aa11.26□□□□□ -0.61
CSNK1D-220ENST00000581737 Q8NFD4 153 aa11.26□□□□□ -0.61
CSNK1D-220ENST00000581737 OR51S1Q8NGJ8 323 aa11.26□□□□□ -0.61
CSNK1D-220ENST00000581737 OR4K15Q8NH41 348 aa11.26□□□□□ -0.61
CSNK1D-220ENST00000581737 CLDND2Q8NHS1 167 aa11.26□□□□□ -0.61
CSNK1D-220ENST00000581737 ST8SIA4Q92187 359 aa11.26□□□□□ -0.61
CSNK1D-220ENST00000581737 CMSS1Q9BQ75 279 aaKnown RBP11.26□□□□□ -0.61
CSNK1D-220ENST00000581737 NARFLQ9H6Q4 476 aa11.26□□□□□ -0.61
CSNK1D-220ENST00000581737 GLS2Q9UI32 602 aa11.26□□□□□ -0.61
CSNK1D-220ENST00000581737 POM121CA8CG34 1229 aa11.25□□□□□ -0.61
CSNK1D-220ENST00000581737 FOXI3A8MTJ6 420 aaPredicted RBP11.25□□□□□ -0.61
CSNK1D-220ENST00000581737 C3orf80F5H4A9 247 aa11.25□□□□□ -0.61
CSNK1D-220ENST00000581737 SYNGR1O43759 233 aa11.25□□□□□ -0.61
CSNK1D-220ENST00000581737 RHBDL1O75783 438 aa11.25□□□□□ -0.61
CSNK1D-220ENST00000581737 NXPH2O95156 264 aa11.25□□□□□ -0.61
CSNK1D-220ENST00000581737 RPS2P15880 293 aaKnown RBP11.25□□□□□ -0.61
CSNK1D-220ENST00000581737 EGR1P18146 543 aa11.25□□□□□ -0.61
CSNK1D-220ENST00000581737 GLRA1P23415 457 aa11.25□□□□□ -0.61
CSNK1D-220ENST00000581737 ARPC4P59998 168 aa11.25□□□□□ -0.61
CSNK1D-220ENST00000581737 TSPAN5P62079 268 aa11.25□□□□□ -0.61
CSNK1D-220ENST00000581737 CBX3Q13185 183 aa11.25□□□□□ -0.61
CSNK1D-220ENST00000581737 RBM39Q14498 530 aaKnown RBP11.25□□□□□ -0.61
CSNK1D-220ENST00000581737 TMEM249Q2WGJ8 235 aa11.25□□□□□ -0.61
CSNK1D-220ENST00000581737 CHRFAM7AQ494W8 412 aa11.25□□□□□ -0.61
CSNK1D-220ENST00000581737 ZFP69Q49AA0 526 aa11.25□□□□□ -0.61
CSNK1D-220ENST00000581737 CRIP3Q6Q6R5 217 aa11.25□□□□□ -0.61
CSNK1D-220ENST00000581737 C1QL2Q7Z5L3 287 aa11.25□□□□□ -0.61
CSNK1D-220ENST00000581737 GLCCI1Q86VQ1 547 aa11.25□□□□□ -0.61
CSNK1D-220ENST00000581737 HOGA1Q86XE5 327 aa11.25□□□□□ -0.61
CSNK1D-220ENST00000581737 EMG1Q92979 244 aaKnown RBP11.25□□□□□ -0.61
CSNK1D-220ENST00000581737 NRIP2Q9BQI9 281 aa11.25□□□□□ -0.61
CSNK1D-220ENST00000581737 ALX4Q9H161 411 aaPredicted RBP11.25□□□□□ -0.61
CSNK1D-220ENST00000581737 RIMS4Q9H426 269 aaPredicted RBP11.25□□□□□ -0.61
CSNK1D-220ENST00000581737 ZNF665Q9H7R5 613 aa11.25□□□□□ -0.61
CSNK1D-220ENST00000581737 TMEM165Q9HC07 324 aa11.25□□□□□ -0.61
CSNK1D-220ENST00000581737 MIOXQ9UGB7 285 aa11.25□□□□□ -0.61
CSNK1D-220ENST00000581737 ABCA1O95477 2261 aa11.25□□□□□ -0.61
CSNK1D-220ENST00000581737 A0A1W2PP11 408 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms