RNA–Protein interactions for RNA: ENST00000581241.5

CSNK1D-217, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 6,094 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-217ENST00000581241 CLDN18P56856 261 aa12.78□□□□□ -0.36
CSNK1D-217ENST00000581241 TRAV8-7A0A075B6U6 113 aa12.78□□□□□ -0.36
CSNK1D-217ENST00000581241 GAMTQ14353 236 aa12.78□□□□□ -0.36
CSNK1D-217ENST00000581241 WDFY1Q8IWB7 410 aa12.78□□□□□ -0.36
CSNK1D-217ENST00000581241 MRPS11P82912 194 aaKnown RBP12.78□□□□□ -0.36
CSNK1D-217ENST00000581241 ZNF788Q6ZQV5 615 aa12.78□□□□□ -0.36
CSNK1D-217ENST00000581241 MRPL37Q9BZE1 423 aaKnown RBP12.78□□□□□ -0.36
CSNK1D-217ENST00000581241 SERGEFQ9UGK8 458 aa12.78□□□□□ -0.36
CSNK1D-217ENST00000581241 CYB5R3P00387 301 aaPredicted RBP12.78□□□□□ -0.36
CSNK1D-217ENST00000581241 SSPNQ14714 243 aa12.78□□□□□ -0.36
CSNK1D-217ENST00000581241 HFEQ30201 348 aa12.78□□□□□ -0.36
CSNK1D-217ENST00000581241 ZNF547Q8IVP9 402 aa12.78□□□□□ -0.36
CSNK1D-217ENST00000581241 SPEM1Q8N4L4 309 aa12.78□□□□□ -0.36
CSNK1D-217ENST00000581241 ZBTB34Q8NCN2 500 aa12.78□□□□□ -0.36
CSNK1D-217ENST00000581241 OR4A4PQ8NGN8 299 aa12.78□□□□□ -0.36
CSNK1D-217ENST00000581241 PTX4Q96A99 478 aa12.78□□□□□ -0.36
CSNK1D-217ENST00000581241 ALX4Q9H161 411 aaPredicted RBP12.78□□□□□ -0.36
CSNK1D-217ENST00000581241 MICAL3Q7RTP6 2002 aa12.78□□□□□ -0.36
CSNK1D-217ENST00000581241 TMIGD3P0DMS9 266 aaPredicted RBP12.78□□□□□ -0.36
CSNK1D-217ENST00000581241 MUC1P15941 1255 aaPredicted RBP12.78□□□□□ -0.36
CSNK1D-217ENST00000581241 OR8A1Q8NGG7 326 aa12.78□□□□□ -0.36
CSNK1D-217ENST00000581241 MRPL30Q8TCC3 161 aaKnown RBP12.78□□□□□ -0.36
CSNK1D-217ENST00000581241 HIST1H1EP10412 219 aaKnown RBP12.77□□□□□ -0.36
CSNK1D-217ENST00000581241 MMP9P14780 707 aa12.77□□□□□ -0.36
CSNK1D-217ENST00000581241 EFNB2P52799 333 aa12.77□□□□□ -0.36
CSNK1D-217ENST00000581241 MYOZ3Q8TDC0 251 aa12.77□□□□□ -0.36
CSNK1D-217ENST00000581241 SSMEM1Q8WWF3 244 aa12.77□□□□□ -0.36
CSNK1D-217ENST00000581241 ZFP30Q9Y2G7 519 aa12.77□□□□□ -0.36
CSNK1D-217ENST00000581241 OR2W1Q9Y3N9 320 aa12.77□□□□□ -0.36
CSNK1D-217ENST00000581241 ADAMTSL3P82987 1691 aa12.77□□□□□ -0.36
CSNK1D-217ENST00000581241 PATE4P0C8F1 98 aa12.77□□□□□ -0.37
CSNK1D-217ENST00000581241 VSIG10L2P0DP72 767 aa12.77□□□□□ -0.37
CSNK1D-217ENST00000581241 ATP6V0CP27449 155 aa12.77□□□□□ -0.37
CSNK1D-217ENST00000581241 MNX1P50219 401 aaPredicted RBP12.77□□□□□ -0.37
CSNK1D-217ENST00000581241 H1FOOQ8IZA3 346 aaPredicted RBP12.77□□□□□ -0.37
CSNK1D-217ENST00000581241 FLYWCH2Q96CP2 140 aaKnown RBP12.77□□□□□ -0.37
CSNK1D-217ENST00000581241 CES1P1Q9UKY3 287 aa12.77□□□□□ -0.37
CSNK1D-217ENST00000581241 COL8A1P27658 744 aa12.77□□□□□ -0.37
CSNK1D-217ENST00000581241 GUSBP11Q6P575 273 aa12.77□□□□□ -0.37
CSNK1D-217ENST00000581241 ARRDC1-AS1Q9H2J1 176 aa12.77□□□□□ -0.37
CSNK1D-217ENST00000581241 CLEC1BQ9P126 229 aa12.77□□□□□ -0.37
CSNK1D-217ENST00000581241 PRNDQ9UKY0 176 aa12.77□□□□□ -0.37
CSNK1D-217ENST00000581241 PSG2P11465 335 aa12.77□□□□□ -0.37
CSNK1D-217ENST00000581241 NRIP2Q9BQI9 281 aa12.77□□□□□ -0.37
CSNK1D-217ENST00000581241 ZFP64Q9NPA5 681 aa12.77□□□□□ -0.37
CSNK1D-217ENST00000581241 F12P00748 615 aaPredicted RBP12.76□□□□□ -0.37
CSNK1D-217ENST00000581241 VSIG8P0DPA2 414 aa12.76□□□□□ -0.37
CSNK1D-217ENST00000581241 TGIF2LYQ8IUE0 185 aa12.76□□□□□ -0.37
CSNK1D-217ENST00000581241 LILRB1Q8NHL6 650 aaPredicted RBP12.76□□□□□ -0.37
CSNK1D-217ENST00000581241 VSTM2LQ96N03 204 aa12.76□□□□□ -0.37
CSNK1D-217ENST00000581241 TMEM204Q9BSN7 226 aa12.76□□□□□ -0.37
CSNK1D-217ENST00000581241 NPIPB8E9PQR5 432 aa12.76□□□□□ -0.37
CSNK1D-217ENST00000581241 DNASE2O00115 360 aaPredicted RBP12.76□□□□□ -0.37
CSNK1D-217ENST00000581241 MELTFP08582 738 aa12.76□□□□□ -0.37
CSNK1D-217ENST00000581241 CEACAM3P40198 252 aa12.76□□□□□ -0.37
CSNK1D-217ENST00000581241 IFITM3Q01628 133 aa12.76□□□□□ -0.37
CSNK1D-217ENST00000581241 SKP2Q13309 424 aa12.76□□□□□ -0.37
CSNK1D-217ENST00000581241 MEX3AA1L020 520 aaKnown RBP12.76□□□□□ -0.37
CSNK1D-217ENST00000581241 PIGYQ3MUY2 71 aa12.76□□□□□ -0.37
CSNK1D-217ENST00000581241 MRGPRFQ96AM1 343 aa12.76□□□□□ -0.37
CSNK1D-217ENST00000581241 EVPLQ92817 2033 aa12.76□□□□□ -0.37
CSNK1D-217ENST00000581241 MKRN2OSH3BPM6 223 aa12.76□□□□□ -0.37
CSNK1D-217ENST00000581241 GCGP01275 180 aa12.76□□□□□ -0.37
CSNK1D-217ENST00000581241 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.76□□□□□ -0.37
CSNK1D-217ENST00000581241 UBALD2Q8IYN6 164 aa12.76□□□□□ -0.37
CSNK1D-217ENST00000581241 PLA2G2FQ9BZM2 168 aa12.76□□□□□ -0.37
CSNK1D-217ENST00000581241 CDK5RAP2Q96SN8 1893 aa12.76□□□□□ -0.37
CSNK1D-217ENST00000581241 IGHV1OR21-1A0A087WYE8 117 aa12.76□□□□□ -0.37
CSNK1D-217ENST00000581241 COX7A1P24310 79 aa12.76□□□□□ -0.37
CSNK1D-217ENST00000581241 ACER2Q5QJU3 275 aa12.76□□□□□ -0.37
CSNK1D-217ENST00000581241 OR4A47Q6IF82 309 aa12.76□□□□□ -0.37
CSNK1D-217ENST00000581241 FAM219AQ8IW50 185 aa12.76□□□□□ -0.37
CSNK1D-217ENST00000581241 OR2H1Q9GZK4 316 aa12.76□□□□□ -0.37
CSNK1D-217ENST00000581241 LYZL6O75951 148 aa12.75□□□□□ -0.37
CSNK1D-217ENST00000581241 GUCA2BQ16661 112 aa12.75□□□□□ -0.37
CSNK1D-217ENST00000581241 OR2D3Q8NGH3 330 aa12.75□□□□□ -0.37
CSNK1D-217ENST00000581241 LRRC3BQ96PB8 259 aa12.75□□□□□ -0.37
CSNK1D-217ENST00000581241 ASCL3Q9NQ33 180 aa12.75□□□□□ -0.37
CSNK1D-217ENST00000581241 TBX21Q9UL17 535 aa12.75□□□□□ -0.37
CSNK1D-217ENST00000581241 TRAV17A0A0B4J275 112 aa12.75□□□□□ -0.37
CSNK1D-217ENST00000581241 BCL2P10415 239 aa12.75□□□□□ -0.37
CSNK1D-217ENST00000581241 BHLHA15Q7RTS1 189 aaPredicted RBP12.75□□□□□ -0.37
CSNK1D-217ENST00000581241 OR4X1Q8NH49 305 aa12.75□□□□□ -0.37
CSNK1D-217ENST00000581241 SPATA45Q537H7 98 aa12.75□□□□□ -0.37
CSNK1D-217ENST00000581241 ADAT3Q96EY9 351 aaPredicted RBP12.75□□□□□ -0.37
CSNK1D-217ENST00000581241 GLRX2Q9NS18 164 aa12.75□□□□□ -0.37
CSNK1D-217ENST00000581241 OR4C46A6NHA9 309 aa12.75□□□□□ -0.37
CSNK1D-217ENST00000581241 C3orf80F5H4A9 247 aa12.75□□□□□ -0.37
CSNK1D-217ENST00000581241 TEPPQ6URK8 271 aa12.75□□□□□ -0.37
CSNK1D-217ENST00000581241 NFAM1Q8NET5 270 aaPredicted RBP12.75□□□□□ -0.37
CSNK1D-217ENST00000581241 GABRG3Q99928 467 aa12.75□□□□□ -0.37
CSNK1D-217ENST00000581241 NPTNQ9Y639 398 aa12.75□□□□□ -0.37
CSNK1D-217ENST00000581241 IGHV3-13P01766 116 aa12.75□□□□□ -0.37
CSNK1D-217ENST00000581241 IGHV3-7P01780 117 aa12.75□□□□□ -0.37
CSNK1D-217ENST00000581241 RAC3P60763 192 aa12.75□□□□□ -0.37
CSNK1D-217ENST00000581241 GBGT1Q8N5D6 347 aa12.75□□□□□ -0.37
CSNK1D-217ENST00000581241 ADAMTS17Q8TE56 1095 aa12.75□□□□□ -0.37
CSNK1D-217ENST00000581241 RNF133Q8WVZ7 376 aa12.75□□□□□ -0.37
CSNK1D-217ENST00000581241 KCNAB3O43448 404 aa12.74□□□□□ -0.37
CSNK1D-217ENST00000581241 NPY1RP25929 384 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms