RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 PGAM2P15259 253 aa10.8□□□□□ -0.68
CDK5RAP3-217ENST00000580287 HOXA4Q00056 320 aaPredicted RBP10.8□□□□□ -0.68
CDK5RAP3-217ENST00000580287 FOXRED2Q8IWF2 684 aa10.8□□□□□ -0.68
CDK5RAP3-217ENST00000580287 PUSL1Q8N0Z8 303 aaKnown RBP10.8□□□□□ -0.68
CDK5RAP3-217ENST00000580287 OR5AP2Q8NGF4 316 aa10.8□□□□□ -0.68
CDK5RAP3-217ENST00000580287 OR5L1Q8NGL2 311 aa10.8□□□□□ -0.68
CDK5RAP3-217ENST00000580287 WFIKKN1Q96NZ8 548 aa10.8□□□□□ -0.68
CDK5RAP3-217ENST00000580287 BBC3Q96PG8 261 aaPredicted RBP10.8□□□□□ -0.68
CDK5RAP3-217ENST00000580287 COA4Q9NYJ1 87 aa10.8□□□□□ -0.68
CDK5RAP3-217ENST00000580287 TNFSF18Q9UNG2 199 aa10.8□□□□□ -0.68
CDK5RAP3-217ENST00000580287 AMDHD2Q9Y303 409 aa10.8□□□□□ -0.68
CDK5RAP3-217ENST00000580287 IGKV1-12A0A0C4DH73 117 aa10.8□□□□□ -0.68
CDK5RAP3-217ENST00000580287 KANTRA0A1W2PQU2 76 aa10.8□□□□□ -0.68
CDK5RAP3-217ENST00000580287 FOXI3A8MTJ6 420 aaPredicted RBP10.8□□□□□ -0.68
CDK5RAP3-217ENST00000580287 H0YL77 283 aa10.8□□□□□ -0.68
CDK5RAP3-217ENST00000580287 BCL2L11O43521 198 aa10.8□□□□□ -0.68
CDK5RAP3-217ENST00000580287 IGKV1D-12P01611 117 aa10.8□□□□□ -0.68
CDK5RAP3-217ENST00000580287 CD8AP01732 235 aa10.8□□□□□ -0.68
CDK5RAP3-217ENST00000580287 SFTPBP07988 381 aa10.8□□□□□ -0.68
CDK5RAP3-217ENST00000580287 GNLYP22749 145 aa10.8□□□□□ -0.68
CDK5RAP3-217ENST00000580287 GLRA1P23415 457 aa10.8□□□□□ -0.68
CDK5RAP3-217ENST00000580287 FUT6P51993 359 aa10.8□□□□□ -0.68
CDK5RAP3-217ENST00000580287 TAS2R31P59538 309 aa10.8□□□□□ -0.68
CDK5RAP3-217ENST00000580287 ARL6IP1Q15041 203 aa10.8□□□□□ -0.68
CDK5RAP3-217ENST00000580287 TMEM128Q5BJH2 165 aa10.8□□□□□ -0.68
CDK5RAP3-217ENST00000580287 LDLRAD3Q86YD5 345 aa10.8□□□□□ -0.68
CDK5RAP3-217ENST00000580287 EMG1Q92979 244 aaKnown RBP10.8□□□□□ -0.68
CDK5RAP3-217ENST00000580287 TMEM230Q96A57 120 aa10.8□□□□□ -0.68
CDK5RAP3-217ENST00000580287 RRNAD1Q96FB5 475 aaKnown RBP10.8□□□□□ -0.68
CDK5RAP3-217ENST00000580287 MARS2Q96GW9 593 aaKnown RBP10.8□□□□□ -0.68
CDK5RAP3-217ENST00000580287 TSNAXQ99598 290 aaKnown RBP10.8□□□□□ -0.68
CDK5RAP3-217ENST00000580287 CMSS1Q9BQ75 279 aaKnown RBP10.8□□□□□ -0.68
CDK5RAP3-217ENST00000580287 DUSP13Q9UII6 198 aa10.8□□□□□ -0.68
CDK5RAP3-217ENST00000580287 ST3GAL6Q9Y274 331 aa10.8□□□□□ -0.68
CDK5RAP3-217ENST00000580287 DUS4LO95620 317 aaKnown RBP10.79□□□□□ -0.68
CDK5RAP3-217ENST00000580287 PDZK1IP1Q13113 114 aa10.79□□□□□ -0.68
CDK5RAP3-217ENST00000580287 GUCA2BQ16661 112 aa10.79□□□□□ -0.68
CDK5RAP3-217ENST00000580287 TMEM211Q6ICI0 200 aa10.79□□□□□ -0.68
CDK5RAP3-217ENST00000580287 LPCAT3Q6P1A2 487 aa10.79□□□□□ -0.68
CDK5RAP3-217ENST00000580287 SLC25A26Q70HW3 274 aa10.79□□□□□ -0.68
CDK5RAP3-217ENST00000580287 OSR2Q8N2R0 312 aa10.79□□□□□ -0.68
CDK5RAP3-217ENST00000580287 MSL2Q9HCI7 577 aa10.79□□□□□ -0.68
CDK5RAP3-217ENST00000580287 AK3Q9UIJ7 227 aa10.79□□□□□ -0.68
CDK5RAP3-217ENST00000580287 ANAPC10Q9UM13 185 aa10.79□□□□□ -0.68
CDK5RAP3-217ENST00000580287 GPR132Q9UNW8 380 aa10.79□□□□□ -0.68
CDK5RAP3-217ENST00000580287 ZNF462Q96JM2 2506 aa10.79□□□□□ -0.68
CDK5RAP3-217ENST00000580287 F5H0A9 414 aaPredicted RBP10.79□□□□□ -0.68
CDK5RAP3-217ENST00000580287 ADCYAP1P18509 176 aa10.79□□□□□ -0.68
CDK5RAP3-217ENST00000580287 FAHD2BQ6P2I3 314 aaPredicted RBP10.79□□□□□ -0.68
CDK5RAP3-217ENST00000580287 HAGHLQ6PII5 290 aaPredicted RBP10.79□□□□□ -0.68
CDK5RAP3-217ENST00000580287 CBLN2Q8IUK8 224 aa10.79□□□□□ -0.68
CDK5RAP3-217ENST00000580287 ZNF611Q8N823 705 aa10.79□□□□□ -0.68
CDK5RAP3-217ENST00000580287 ZSCAN4Q8NAM6 433 aaPredicted RBP10.79□□□□□ -0.68
CDK5RAP3-217ENST00000580287 OR10AD1Q8NGE0 317 aa10.79□□□□□ -0.68
CDK5RAP3-217ENST00000580287 OR1S2Q8NGQ3 325 aa10.79□□□□□ -0.68
CDK5RAP3-217ENST00000580287 LINC01560Q8TB33 94 aa10.79□□□□□ -0.68
CDK5RAP3-217ENST00000580287 FAHD2AQ96GK7 314 aa10.79□□□□□ -0.68
CDK5RAP3-217ENST00000580287 HS3ST6Q96QI5 342 aa10.79□□□□□ -0.68
CDK5RAP3-217ENST00000580287 SULT4A1Q9BR01 284 aa10.79□□□□□ -0.68
CDK5RAP3-217ENST00000580287 ADAT1Q9BUB4 502 aaKnown RBP10.79□□□□□ -0.68
CDK5RAP3-217ENST00000580287 OBP2BQ9NPH6 170 aa10.79□□□□□ -0.68
CDK5RAP3-217ENST00000580287 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.79□□□□□ -0.68
CDK5RAP3-217ENST00000580287 PKDREJQ9NTG1 2253 aa10.79□□□□□ -0.68
CDK5RAP3-217ENST00000580287 TMEM218A2RU14 115 aa10.78□□□□□ -0.68
CDK5RAP3-217ENST00000580287 MSGN1A6NI15 193 aa10.78□□□□□ -0.68
CDK5RAP3-217ENST00000580287 ZNF732B4DXR9 585 aa10.78□□□□□ -0.68
CDK5RAP3-217ENST00000580287 F8VVB4 439 aa10.78□□□□□ -0.68
CDK5RAP3-217ENST00000580287 F8VWA3 439 aa10.78□□□□□ -0.68
CDK5RAP3-217ENST00000580287 H0YIZ8 118 aa10.78□□□□□ -0.68
CDK5RAP3-217ENST00000580287 OR7C1O76099 320 aaPredicted RBP10.78□□□□□ -0.68
CDK5RAP3-217ENST00000580287 FPR2P25090 351 aa10.78□□□□□ -0.68
CDK5RAP3-217ENST00000580287 HAAOP46952 286 aa10.78□□□□□ -0.68
CDK5RAP3-217ENST00000580287 NPBWR2P48146 333 aa10.78□□□□□ -0.68
CDK5RAP3-217ENST00000580287 RAB13P51153 203 aa10.78□□□□□ -0.68
CDK5RAP3-217ENST00000580287 TLE1Q04724 770 aa10.78□□□□□ -0.68
CDK5RAP3-217ENST00000580287 AADACL3Q5VUY0 350 aa10.78□□□□□ -0.68
CDK5RAP3-217ENST00000580287 CLEC18BQ6UXF7 455 aa10.78□□□□□ -0.68
CDK5RAP3-217ENST00000580287 FBXW12Q6X9E4 464 aa10.78□□□□□ -0.68
CDK5RAP3-217ENST00000580287 GTF3AQ92664 365 aaKnown RBP10.78□□□□□ -0.68
CDK5RAP3-217ENST00000580287 SCGB3A2Q96PL1 93 aa10.78□□□□□ -0.68
CDK5RAP3-217ENST00000580287 ZNF2Q9BSG1 426 aaPredicted RBP10.78□□□□□ -0.68
CDK5RAP3-217ENST00000580287 PCDHB10Q9UN67 800 aa10.78□□□□□ -0.68
CDK5RAP3-217ENST00000580287 F8W036 122 aa10.78□□□□□ -0.68
CDK5RAP3-217ENST00000580287 SUPT4H1P63272 117 aaKnown RBP10.78□□□□□ -0.68
CDK5RAP3-217ENST00000580287 ZNF345Q14585 488 aa10.78□□□□□ -0.68
CDK5RAP3-217ENST00000580287 ANKRD55Q3KP44 614 aa10.78□□□□□ -0.68
CDK5RAP3-217ENST00000580287 UQCC3Q6UW78 93 aa10.78□□□□□ -0.68
CDK5RAP3-217ENST00000580287 ZDHHC23Q8IYP9 409 aa10.78□□□□□ -0.68
CDK5RAP3-217ENST00000580287 ZNF488Q96MN9 340 aa10.78□□□□□ -0.68
CDK5RAP3-217ENST00000580287 ELOVL5Q9NYP7 299 aa10.78□□□□□ -0.68
CDK5RAP3-217ENST00000580287 ANKHD1Q8IWZ3 2542 aaKnown RBP10.77□□□□□ -0.68
CDK5RAP3-217ENST00000580287 ABCA4P78363 2273 aa10.77□□□□□ -0.68
CDK5RAP3-217ENST00000580287 A0A0B4J2A0 478 aa10.77□□□□□ -0.68
CDK5RAP3-217ENST00000580287 DPRXA6NFQ7 191 aa10.77□□□□□ -0.68
CDK5RAP3-217ENST00000580287 ANKRD30BLA7E2S9 258 aa10.77□□□□□ -0.68
CDK5RAP3-217ENST00000580287 OR2F2O95006 317 aa10.77□□□□□ -0.68
CDK5RAP3-217ENST00000580287 CRYAAP02489 173 aa10.77□□□□□ -0.68
CDK5RAP3-217ENST00000580287 CD40P25942 277 aa10.77□□□□□ -0.68
CDK5RAP3-217ENST00000580287 OR2F1Q13607 317 aa10.77□□□□□ -0.68
CDK5RAP3-217ENST00000580287 THAP6Q8TBB0 222 aa10.77□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms