RNA–Protein interactions for RNA: ENST00000580073.1

TRAF4-214, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 449 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-214ENST00000580073 DPF1Q92782 380 aa10.76□□□□□ -0.69
TRAF4-214ENST00000580073 RCC1LQ96I51 464 aaKnown RBP10.76□□□□□ -0.69
TRAF4-214ENST00000580073 SNX22Q96L94 193 aa10.76□□□□□ -0.69
TRAF4-214ENST00000580073 CLEC7AQ9BXN2 247 aa10.76□□□□□ -0.69
TRAF4-214ENST00000580073 TMEM138Q9NPI0 162 aa10.76□□□□□ -0.69
TRAF4-214ENST00000580073 RBFOX1Q9NWB1 397 aaKnown RBP10.76□□□□□ -0.69
TRAF4-214ENST00000580073 LINC00312Q9Y6C7 94 aa10.76□□□□□ -0.69
TRAF4-214ENST00000580073 KDM4BO94953 1096 aa10.75□□□□□ -0.69
TRAF4-214ENST00000580073 CD37P11049 281 aa10.75□□□□□ -0.69
TRAF4-214ENST00000580073 PAX6P26367 422 aa10.75□□□□□ -0.69
TRAF4-214ENST00000580073 BRS3P32247 399 aa10.75□□□□□ -0.69
TRAF4-214ENST00000580073 DLX6P56179 175 aa10.75□□□□□ -0.69
TRAF4-214ENST00000580073 DDI2Q5TDH0 399 aa10.75□□□□□ -0.69
TRAF4-214ENST00000580073 OR52W1Q6IF63 320 aa10.75□□□□□ -0.69
TRAF4-214ENST00000580073 ASCL4Q6XD76 172 aa10.75□□□□□ -0.69
TRAF4-214ENST00000580073 WIPF2Q8TF74 440 aaPredicted RBP10.75□□□□□ -0.69
TRAF4-214ENST00000580073 FCGR1BQ92637 280 aa10.75□□□□□ -0.69
TRAF4-214ENST00000580073 CREB3L1Q96BA8 519 aa10.75□□□□□ -0.69
TRAF4-214ENST00000580073 GAL3ST2Q9H3Q3 398 aa10.75□□□□□ -0.69
TRAF4-214ENST00000580073 LIN7BQ9HAP6 207 aa10.75□□□□□ -0.69
TRAF4-214ENST00000580073 TSSC4Q9Y5U2 329 aaPredicted RBP10.75□□□□□ -0.69
TRAF4-214ENST00000580073 A0A087WXM4 84 aa10.74□□□□□ -0.69
TRAF4-214ENST00000580073 IGHV2-26A0A0B4J1V2 119 aa10.74□□□□□ -0.69
TRAF4-214ENST00000580073 FUOMA2VDF0 154 aa10.74□□□□□ -0.69
TRAF4-214ENST00000580073 CCRL2O00421 344 aa10.74□□□□□ -0.69
TRAF4-214ENST00000580073 CDRT1O95170 752 aa10.74□□□□□ -0.69
TRAF4-214ENST00000580073 JUNBP17275 347 aaPredicted RBP10.74□□□□□ -0.69
TRAF4-214ENST00000580073 SRMP19623 302 aa10.74□□□□□ -0.69
TRAF4-214ENST00000580073 HTR1DP28221 377 aa10.74□□□□□ -0.69
TRAF4-214ENST00000580073 DUSP1P28562 367 aa10.74□□□□□ -0.69
TRAF4-214ENST00000580073 CEACAM3P40198 252 aa10.74□□□□□ -0.69
TRAF4-214ENST00000580073 EDDM3AQ14507 147 aa10.74□□□□□ -0.69
TRAF4-214ENST00000580073 FOXB2Q5VYV0 432 aa10.74□□□□□ -0.69
TRAF4-214ENST00000580073 CCBE1Q6UXH8 406 aaPredicted RBP10.74□□□□□ -0.69
TRAF4-214ENST00000580073 TRAPPC6BQ86SZ2 158 aa10.74□□□□□ -0.69
TRAF4-214ENST00000580073 RTN4RL2Q86UN3 420 aa10.74□□□□□ -0.69
TRAF4-214ENST00000580073 OR5AU1Q8NGC0 362 aa10.74□□□□□ -0.69
TRAF4-214ENST00000580073 OR4D6Q8NGJ1 314 aa10.74□□□□□ -0.69
TRAF4-214ENST00000580073 OR10K1Q8NGX5 313 aa10.74□□□□□ -0.69
TRAF4-214ENST00000580073 ZNF596Q8TC21 504 aa10.74□□□□□ -0.69
TRAF4-214ENST00000580073 EMG1Q92979 244 aaKnown RBP10.74□□□□□ -0.69
TRAF4-214ENST00000580073 CYYR1Q96J86 154 aa10.74□□□□□ -0.69
TRAF4-214ENST00000580073 NR1H4Q96RI1 486 aaPredicted RBP10.74□□□□□ -0.69
TRAF4-214ENST00000580073 OR51E2Q9H255 320 aa10.74□□□□□ -0.69
TRAF4-214ENST00000580073 TMEM133Q9H2Q1 129 aa10.74□□□□□ -0.69
TRAF4-214ENST00000580073 RNF167Q9H6Y7 350 aa10.74□□□□□ -0.69
TRAF4-214ENST00000580073 SEBOXQ9HB31 216 aaPredicted RBP10.74□□□□□ -0.69
TRAF4-214ENST00000580073 ZNF581Q9P0T4 197 aa10.74□□□□□ -0.69
TRAF4-214ENST00000580073 UBE2J1Q9Y385 318 aaPredicted RBP10.74□□□□□ -0.69
TRAF4-214ENST00000580073 KIAA2026Q5HYC2 2103 aa10.73□□□□□ -0.69
TRAF4-214ENST00000580073 TRDV1A0A1B0GX56 115 aa10.73□□□□□ -0.69
TRAF4-214ENST00000580073 A0A1W2PP11 408 aa10.73□□□□□ -0.69
TRAF4-214ENST00000580073 ADARB2-AS1A8MUL3 147 aa10.73□□□□□ -0.69
TRAF4-214ENST00000580073 M0QZK8 103 aa10.73□□□□□ -0.69
TRAF4-214ENST00000580073 MGST3O14880 152 aa10.73□□□□□ -0.69
TRAF4-214ENST00000580073 ZNF737O75373 536 aa10.73□□□□□ -0.69
TRAF4-214ENST00000580073 OCMP0CE72 109 aaPredicted RBP10.73□□□□□ -0.69
TRAF4-214ENST00000580073 TMEM225BP0DP42 221 aa10.73□□□□□ -0.69
TRAF4-214ENST00000580073 ZNF93P35789 620 aaPredicted RBP10.73□□□□□ -0.69
TRAF4-214ENST00000580073 PTGFRP43088 359 aa10.73□□□□□ -0.69
TRAF4-214ENST00000580073 RAB13P51153 203 aa10.73□□□□□ -0.69
TRAF4-214ENST00000580073 SNU13P55769 128 aaKnown RBP10.73□□□□□ -0.69
TRAF4-214ENST00000580073 PPP3R1P63098 170 aa10.73□□□□□ -0.69
TRAF4-214ENST00000580073 GRK1Q15835 563 aa10.73□□□□□ -0.69
TRAF4-214ENST00000580073 HSD17B12Q53GQ0 312 aa10.73□□□□□ -0.69
TRAF4-214ENST00000580073 SPIN3Q5JUX0 258 aa10.73□□□□□ -0.69
TRAF4-214ENST00000580073 VAX1Q5SQQ9 334 aa10.73□□□□□ -0.69
TRAF4-214ENST00000580073 CENPVQ7Z7K6 275 aaPredicted RBP10.73□□□□□ -0.69
TRAF4-214ENST00000580073 SAXO1Q8IYX7 474 aa10.73□□□□□ -0.69
TRAF4-214ENST00000580073 FAM58AQ8N1B3 248 aa10.73□□□□□ -0.69
TRAF4-214ENST00000580073 DYNAPQ8N1N2 210 aa10.73□□□□□ -0.69
TRAF4-214ENST00000580073 PXT1Q8NFP0 134 aa10.73□□□□□ -0.69
TRAF4-214ENST00000580073 OR51D1Q8NGF3 324 aa10.73□□□□□ -0.69
TRAF4-214ENST00000580073 TNFAIP8L1Q8WVP5 186 aa10.73□□□□□ -0.69
TRAF4-214ENST00000580073 YIPF6Q96EC8 236 aa10.73□□□□□ -0.69
TRAF4-214ENST00000580073 OCSTAMPQ9BR26 566 aa10.73□□□□□ -0.69
TRAF4-214ENST00000580073 HMG20AQ9NP66 347 aa10.73□□□□□ -0.69
TRAF4-214ENST00000580073 HILPDAQ9Y5L2 63 aa10.73□□□□□ -0.69
TRAF4-214ENST00000580073 A0A1W2PRX2 142 aa10.72□□□□□ -0.69
TRAF4-214ENST00000580073 TMEM82A0PJX8 343 aa10.72□□□□□ -0.69
TRAF4-214ENST00000580073 MPIG6BO95866 241 aa10.72□□□□□ -0.69
TRAF4-214ENST00000580073 HAND1O96004 215 aa10.72□□□□□ -0.69
TRAF4-214ENST00000580073 GABRR1P24046 479 aa10.72□□□□□ -0.69
TRAF4-214ENST00000580073 GADD45AP24522 165 aa10.72□□□□□ -0.69
TRAF4-214ENST00000580073 PSMA1P25786 263 aaKnown RBP10.72□□□□□ -0.69
TRAF4-214ENST00000580073 MAPK3P27361 379 aaPredicted RBP10.72□□□□□ -0.69
TRAF4-214ENST00000580073 CD83Q01151 205 aa10.72□□□□□ -0.69
TRAF4-214ENST00000580073 TRAM1Q15629 374 aa10.72□□□□□ -0.69
TRAF4-214ENST00000580073 KHDC1LQ5JSQ8 128 aa10.72□□□□□ -0.69
TRAF4-214ENST00000580073 C22orf42Q6IC83 251 aa10.72□□□□□ -0.69
TRAF4-214ENST00000580073 CCDC144NLQ6NUI1 221 aa10.72□□□□□ -0.69
TRAF4-214ENST00000580073 Q6P435 159 aa10.72□□□□□ -0.69
TRAF4-214ENST00000580073 NR2C2APQ86WQ0 139 aa10.72□□□□□ -0.69
TRAF4-214ENST00000580073 WFDC9Q8NEX5 89 aa10.72□□□□□ -0.69
TRAF4-214ENST00000580073 Q8NFD4 153 aa10.72□□□□□ -0.69
TRAF4-214ENST00000580073 PHYHIPQ92561 330 aa10.72□□□□□ -0.69
TRAF4-214ENST00000580073 GPER1Q99527 375 aa10.72□□□□□ -0.69
TRAF4-214ENST00000580073 KCNK15Q9H427 330 aa10.72□□□□□ -0.69
TRAF4-214ENST00000580073 NEK6Q9HC98 313 aa10.72□□□□□ -0.69
TRAF4-214ENST00000580073 TXNL4BQ9NX01 149 aaKnown RBP10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms