RNA–Protein interactions for RNA: ENST00000578547.1

IFT20-207, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best)

Gene IFT20, Length 962 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-207ENST00000578547 CMSS1Q9BQ75 279 aaKnown RBP10.03□□□□□ -0.8
IFT20-207ENST00000578547 NUDT16L1Q9BRJ7 211 aaKnown RBP10.03□□□□□ -0.8
IFT20-207ENST00000578547 C12orf4Q9NQ89 552 aa10.03□□□□□ -0.8
IFT20-207ENST00000578547 ONECUT1Q9UBC0 465 aa10.03□□□□□ -0.8
IFT20-207ENST00000578547 RPUSD1Q9UJJ7 312 aaKnown RBP10.03□□□□□ -0.8
IFT20-207ENST00000578547 KCNK7Q9Y2U2 307 aa10.03□□□□□ -0.8
IFT20-207ENST00000578547 ABCA2Q9BZC7 2435 aa10.03□□□□□ -0.8
IFT20-207ENST00000578547 CSPG4Q6UVK1 2322 aa10.02□□□□□ -0.8
IFT20-207ENST00000578547 PPIAL4CA0A0B4J2A2 164 aa10.02□□□□□ -0.81
IFT20-207ENST00000578547 IGHV2-70DA0A0C4DH43 119 aa10.02□□□□□ -0.81
IFT20-207ENST00000578547 hADV38S2A0JD32 116 aa10.02□□□□□ -0.81
IFT20-207ENST00000578547 SERPINE3A8MV23 424 aa10.02□□□□□ -0.81
IFT20-207ENST00000578547 ENSAO43768 121 aaKnown RBP10.02□□□□□ -0.81
IFT20-207ENST00000578547 INHBBP09529 407 aa10.02□□□□□ -0.81
IFT20-207ENST00000578547 PPIAL4GP0DN37 164 aa10.02□□□□□ -0.81
IFT20-207ENST00000578547 ZNF273Q14593 569 aa10.02□□□□□ -0.81
IFT20-207ENST00000578547 ARL6IP1Q15041 203 aa10.02□□□□□ -0.81
IFT20-207ENST00000578547 RNASE12Q5GAN4 147 aaKnown RBP10.02□□□□□ -0.81
IFT20-207ENST00000578547 TMEM200BQ69YZ2 307 aa10.02□□□□□ -0.81
IFT20-207ENST00000578547 SLC35E4Q6ICL7 350 aa10.02□□□□□ -0.81
IFT20-207ENST00000578547 MRGPRDQ8TDS7 321 aa10.02□□□□□ -0.81
IFT20-207ENST00000578547 AUNIPQ9H7T9 357 aa10.02□□□□□ -0.81
IFT20-207ENST00000578547 MMP26Q9NRE1 261 aa10.02□□□□□ -0.81
IFT20-207ENST00000578547 LPAR3Q9UBY5 353 aa10.02□□□□□ -0.81
IFT20-207ENST00000578547 TRAPPC2LQ9UL33 140 aa10.02□□□□□ -0.81
IFT20-207ENST00000578547 MALRD1Q5VYJ5 2156 aa10.02□□□□□ -0.81
IFT20-207ENST00000578547 YLPM1P49750 1951 aaKnown RBP10.01□□□□□ -0.81
IFT20-207ENST00000578547 TRGV10A0A0A0MS01 117 aa10.01□□□□□ -0.81
IFT20-207ENST00000578547 A0A0G2JMP0 313 aa10.01□□□□□ -0.81
IFT20-207ENST00000578547 A0A0X1KG70 313 aa10.01□□□□□ -0.81
IFT20-207ENST00000578547 CA11O75493 328 aa10.01□□□□□ -0.81
IFT20-207ENST00000578547 TGFAP01135 160 aa10.01□□□□□ -0.81
IFT20-207ENST00000578547 MT-ND4P03905 459 aa10.01□□□□□ -0.81
IFT20-207ENST00000578547 LIPFP07098 398 aa10.01□□□□□ -0.81
IFT20-207ENST00000578547 FOSL1P15407 271 aa10.01□□□□□ -0.81
IFT20-207ENST00000578547 CCL3L1P16619 93 aa10.01□□□□□ -0.81
IFT20-207ENST00000578547 ERP29P30040 261 aaKnown RBP10.01□□□□□ -0.81
IFT20-207ENST00000578547 GUCA2AQ02747 115 aa10.01□□□□□ -0.81
IFT20-207ENST00000578547 MEF2CQ06413 473 aaPredicted RBP10.01□□□□□ -0.81
IFT20-207ENST00000578547 KRTAP1-1Q07627 177 aa10.01□□□□□ -0.81
IFT20-207ENST00000578547 IL18Q14116 193 aa10.01□□□□□ -0.81
IFT20-207ENST00000578547 DCAF12L2Q5VW00 463 aa10.01□□□□□ -0.81
IFT20-207ENST00000578547 HACD4Q5VWC8 232 aa10.01□□□□□ -0.81
IFT20-207ENST00000578547 CYB5R2Q6BCY4 276 aa10.01□□□□□ -0.81
IFT20-207ENST00000578547 FAM131AQ6UXB0 335 aa10.01□□□□□ -0.81
IFT20-207ENST00000578547 BTNL3Q6UXE8 466 aa10.01□□□□□ -0.81
IFT20-207ENST00000578547 TCF23Q7RTU1 214 aa10.01□□□□□ -0.81
IFT20-207ENST00000578547 GLCCI1Q86VQ1 547 aa10.01□□□□□ -0.81
IFT20-207ENST00000578547 PRR18Q8N4B5 295 aa10.01□□□□□ -0.81
IFT20-207ENST00000578547 OR4M2Q8NGB6 313 aa10.01□□□□□ -0.81
IFT20-207ENST00000578547 OR6Q1Q8NGQ2 317 aa10.01□□□□□ -0.81
IFT20-207ENST00000578547 OR13A1Q8NGR1 328 aa10.01□□□□□ -0.81
IFT20-207ENST00000578547 UBALD1Q8TB05 177 aa10.01□□□□□ -0.81
IFT20-207ENST00000578547 MRPL30Q8TCC3 161 aaKnown RBP10.01□□□□□ -0.81
IFT20-207ENST00000578547 MAFIPQ8WZ33 124 aa10.01□□□□□ -0.81
IFT20-207ENST00000578547 TMEM186Q96B77 213 aa10.01□□□□□ -0.81
IFT20-207ENST00000578547 WDFY2Q96P53 400 aa10.01□□□□□ -0.81
IFT20-207ENST00000578547 SMR3AQ99954 134 aa10.01□□□□□ -0.81
IFT20-207ENST00000578547 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.01□□□□□ -0.81
IFT20-207ENST00000578547 HIF1ANQ9NWT6 349 aa10.01□□□□□ -0.81
IFT20-207ENST00000578547 OR6C3Q9NZP0 311 aa10.01□□□□□ -0.81
IFT20-207ENST00000578547 LINC00312Q9Y6C7 94 aa10.01□□□□□ -0.81
IFT20-207ENST00000578547 F8P00451 2351 aa10.01□□□□□ -0.81
IFT20-207ENST00000578547 ABCA1O95477 2261 aa10□□□□□ -0.81
IFT20-207ENST00000578547 TRAV20A0A0B4J274 112 aa10□□□□□ -0.81
IFT20-207ENST00000578547 A0A1W2PPH5 198 aa10□□□□□ -0.81
IFT20-207ENST00000578547 MEIS3P1A6NDR6 274 aa10□□□□□ -0.81
IFT20-207ENST00000578547 FABP12A6NFH5 140 aa10□□□□□ -0.81
IFT20-207ENST00000578547 NAPSAO96009 420 aa10□□□□□ -0.81
IFT20-207ENST00000578547 FCER2P06734 321 aa10□□□□□ -0.81
IFT20-207ENST00000578547 FCGR3AP08637 254 aa10□□□□□ -0.81
IFT20-207ENST00000578547 RCC1P18754 421 aaPredicted RBP10□□□□□ -0.81
IFT20-207ENST00000578547 SSTR5P35346 364 aa10□□□□□ -0.81
IFT20-207ENST00000578547 DVL1P1P54792 670 aaPredicted RBP10□□□□□ -0.81
IFT20-207ENST00000578547 PAX5Q02548 391 aa10□□□□□ -0.81
IFT20-207ENST00000578547 PAX2Q02962 417 aa10□□□□□ -0.81
IFT20-207ENST00000578547 PNLIPRP3Q17RR3 467 aa10□□□□□ -0.81
IFT20-207ENST00000578547 SPANXN2Q5MJ10 180 aa10□□□□□ -0.81
IFT20-207ENST00000578547 BAIAP2L2Q6UXY1 529 aa10□□□□□ -0.81
IFT20-207ENST00000578547 LY6G5BQ8NDX9 201 aa10□□□□□ -0.81
IFT20-207ENST00000578547 C8orf46Q8TAG6 207 aa10□□□□□ -0.81
IFT20-207ENST00000578547 ZNF714Q96N38 554 aa10□□□□□ -0.81
IFT20-207ENST00000578547 ZNF230Q9UIE0 474 aaPredicted RBP10□□□□□ -0.81
IFT20-207ENST00000578547 POLR3KQ9Y2Y1 108 aaPredicted RBP10□□□□□ -0.81
IFT20-207ENST00000578547 UBE2J1Q9Y385 318 aaPredicted RBP10□□□□□ -0.81
IFT20-207ENST00000578547 TLN2Q9Y4G6 2542 aa9.99□□□□□ -0.81
IFT20-207ENST00000578547 ARHGAP32A7KAX9 2087 aa9.99□□□□□ -0.81
IFT20-207ENST00000578547 KIR2DS1A0A191URI9 304 aa9.99□□□□□ -0.81
IFT20-207ENST00000578547 MEIOCA2RUB1 952 aa9.99□□□□□ -0.81
IFT20-207ENST00000578547 SSX5O60225 188 aa9.99□□□□□ -0.81
IFT20-207ENST00000578547 HLA-DQB1P01920 261 aa9.99□□□□□ -0.81
IFT20-207ENST00000578547 PRSS3P35030 304 aa9.99□□□□□ -0.81
IFT20-207ENST00000578547 ARF6P62330 175 aa9.99□□□□□ -0.81
IFT20-207ENST00000578547 PITPNAQ00169 270 aa9.99□□□□□ -0.81
IFT20-207ENST00000578547 LTC4SQ16873 150 aa9.99□□□□□ -0.81
IFT20-207ENST00000578547 C11orf91Q3C1V1 193 aa9.99□□□□□ -0.81
IFT20-207ENST00000578547 C6orf183Q5T699 404 aa9.99□□□□□ -0.81
IFT20-207ENST00000578547 PRAMEF5Q5TYX0 476 aa9.99□□□□□ -0.81
IFT20-207ENST00000578547 FAHD2BQ6P2I3 314 aaPredicted RBP9.99□□□□□ -0.81
IFT20-207ENST00000578547 Q6ZPA2 131 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms