RNA–Protein interactions for RNA: ENST00000577541.1

TOP2A-202, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-202ENST00000577541 PHOSPHO2Q8TCD6 241 aa0.8□□□□□ -2.28
TOP2A-202ENST00000577541 DOK4Q8TEW6 326 aa0.8□□□□□ -2.28
TOP2A-202ENST00000577541 TWIST2Q8WVJ9 160 aa0.8□□□□□ -2.28
TOP2A-202ENST00000577541 GTF2H4Q92759 462 aa0.8□□□□□ -2.28
TOP2A-202ENST00000577541 CLDN23Q96B33 292 aa0.8□□□□□ -2.28
TOP2A-202ENST00000577541 YPEL4Q96NS1 127 aa0.8□□□□□ -2.28
TOP2A-202ENST00000577541 ACBD6Q9BR61 282 aa0.8□□□□□ -2.28
TOP2A-202ENST00000577541 ANAPC13Q9BS18 74 aa0.8□□□□□ -2.28
TOP2A-202ENST00000577541 UPF3BQ9BZI7 483 aaKnown RBP0.8□□□□□ -2.28
TOP2A-202ENST00000577541 CHST5Q9GZS9 411 aa0.8□□□□□ -2.28
TOP2A-202ENST00000577541 OR51E2Q9H255 320 aa0.8□□□□□ -2.28
TOP2A-202ENST00000577541 C16orf95Q9H693 158 aa0.8□□□□□ -2.28
TOP2A-202ENST00000577541 RHOFQ9HBH0 211 aa0.8□□□□□ -2.28
TOP2A-202ENST00000577541 C14orf166Q9Y224 244 aaKnown RBP0.8□□□□□ -2.28
TOP2A-202ENST00000577541 POMPQ9Y244 141 aa0.8□□□□□ -2.28
TOP2A-202ENST00000577541 NUP205Q92621 2012 aa0.8□□□□□ -2.28
TOP2A-202ENST00000577541 SDK2Q58EX2 2172 aa0.8□□□□□ -2.28
TOP2A-202ENST00000577541 ZNF407Q9C0G0 2248 aa0.8□□□□□ -2.28
TOP2A-202ENST00000577541 DYSFO75923 2080 aa0.79□□□□□ -2.28
TOP2A-202ENST00000577541 A0A1B0GU33 70 aa0.79□□□□□ -2.28
TOP2A-202ENST00000577541 OR5H14A6NHG9 310 aa0.79□□□□□ -2.28
TOP2A-202ENST00000577541 OR6C70A6NIJ9 312 aa0.79□□□□□ -2.28
TOP2A-202ENST00000577541 TMEM250H0YL14 139 aa0.79□□□□□ -2.28
TOP2A-202ENST00000577541 J3QRE1 110 aa0.79□□□□□ -2.28
TOP2A-202ENST00000577541 K7ERQ8 282 aa0.79□□□□□ -2.28
TOP2A-202ENST00000577541 SULT1C2O00338 296 aa0.79□□□□□ -2.28
TOP2A-202ENST00000577541 FGF16O43320 207 aa0.79□□□□□ -2.28
TOP2A-202ENST00000577541 APOA1P02647 267 aa0.79□□□□□ -2.28
TOP2A-202ENST00000577541 LIMS3P0CW19 117 aa0.79□□□□□ -2.28
TOP2A-202ENST00000577541 LIMS4P0CW20 117 aa0.79□□□□□ -2.28
TOP2A-202ENST00000577541 GRPRP30550 384 aa0.79□□□□□ -2.28
TOP2A-202ENST00000577541 RAB25P57735 213 aa0.79□□□□□ -2.28
TOP2A-202ENST00000577541 RAB2AP61019 212 aa0.79□□□□□ -2.28
TOP2A-202ENST00000577541 APOFQ13790 326 aa0.79□□□□□ -2.28
TOP2A-202ENST00000577541 PDGFRLQ15198 375 aa0.79□□□□□ -2.28
TOP2A-202ENST00000577541 ZNF141Q15928 474 aa0.79□□□□□ -2.28
TOP2A-202ENST00000577541 C4orf26Q17RF5 130 aa0.79□□□□□ -2.28
TOP2A-202ENST00000577541 FAM229BQ4G0N7 80 aa0.79□□□□□ -2.28
TOP2A-202ENST00000577541 TIMM23BQ5SRD1 257 aa0.79□□□□□ -2.28
TOP2A-202ENST00000577541 UGT2A3Q6UWM9 527 aa0.79□□□□□ -2.28
TOP2A-202ENST00000577541 DGAT2L6Q6ZPD8 337 aa0.79□□□□□ -2.28
TOP2A-202ENST00000577541 SSX7Q7RTT5 188 aa0.79□□□□□ -2.28
TOP2A-202ENST00000577541 MUC15Q8N387 334 aa0.79□□□□□ -2.28
TOP2A-202ENST00000577541 SLC25A45Q8N413 288 aa0.79□□□□□ -2.28
TOP2A-202ENST00000577541 EIF4E3Q8N5X7 224 aaKnown RBP0.79□□□□□ -2.28
TOP2A-202ENST00000577541 KRTCAP2Q8N6L1 136 aa0.79□□□□□ -2.28
TOP2A-202ENST00000577541 OR10D4PQ8NGN7 298 aa0.79□□□□□ -2.28
TOP2A-202ENST00000577541 PDCD6IPQ8WUM4 868 aaKnown RBP0.79□□□□□ -2.28
TOP2A-202ENST00000577541 CCDC127Q96BQ5 260 aa0.79□□□□□ -2.28
TOP2A-202ENST00000577541 MRAP2Q96G30 205 aa0.79□□□□□ -2.28
TOP2A-202ENST00000577541 SLC25A44Q96H78 314 aaPredicted RBP0.79□□□□□ -2.28
TOP2A-202ENST00000577541 TMEM56Q96MV1 263 aa0.79□□□□□ -2.28
TOP2A-202ENST00000577541 TRIB3Q96RU7 358 aa0.79□□□□□ -2.28
TOP2A-202ENST00000577541 PKMYT1Q99640 499 aa0.79□□□□□ -2.28
TOP2A-202ENST00000577541 EBPLQ9BY08 206 aa0.79□□□□□ -2.28
TOP2A-202ENST00000577541 POTEKPQ9BYX7 375 aa0.79□□□□□ -2.28
TOP2A-202ENST00000577541 DUSP21Q9H596 190 aa0.79□□□□□ -2.28
TOP2A-202ENST00000577541 SPACA1Q9HBV2 294 aa0.79□□□□□ -2.28
TOP2A-202ENST00000577541 DIABLOQ9NR28 239 aa0.79□□□□□ -2.28
TOP2A-202ENST00000577541 ASF1BQ9NVP2 202 aa0.79□□□□□ -2.28
TOP2A-202ENST00000577541 EURLQ9NYK6 297 aa0.79□□□□□ -2.28
TOP2A-202ENST00000577541 DNAJC27Q9NZQ0 273 aa0.79□□□□□ -2.28
TOP2A-202ENST00000577541 FBXL3Q9UKT7 428 aa0.79□□□□□ -2.28
TOP2A-202ENST00000577541 SAMHD1Q9Y3Z3 626 aaKnown RBP0.79□□□□□ -2.28
TOP2A-202ENST00000577541 PHLDA3Q9Y5J5 127 aa0.79□□□□□ -2.28
TOP2A-202ENST00000577541 USH1CQ9Y6N9 552 aa0.79□□□□□ -2.28
TOP2A-202ENST00000577541 URGCP-MRPS24S4R325 110 aa0.79□□□□□ -2.28
TOP2A-202ENST00000577541 LTBP2Q14767 1821 aa0.79□□□□□ -2.28
TOP2A-202ENST00000577541 NUP153P49790 1475 aaKnown RBP0.79□□□□□ -2.28
TOP2A-202ENST00000577541 ADGRB3O60242 1522 aa0.79□□□□□ -2.28
TOP2A-202ENST00000577541 MYO16Q9Y6X6 1858 aa0.78□□□□□ -2.28
TOP2A-202ENST00000577541 IGHV1-45A0A0A0MS14 117 aa0.78□□□□□ -2.28
TOP2A-202ENST00000577541 GMNCA6NCL1 334 aa0.78□□□□□ -2.28
TOP2A-202ENST00000577541 TRPC5OSA6NMA1 111 aa0.78□□□□□ -2.28
TOP2A-202ENST00000577541 C9JQL5 133 aa0.78□□□□□ -2.28
TOP2A-202ENST00000577541 M0QX08 132 aa0.78□□□□□ -2.28
TOP2A-202ENST00000577541 UPK2O00526 184 aa0.78□□□□□ -2.28
TOP2A-202ENST00000577541 TCAPO15273 167 aa0.78□□□□□ -2.28
TOP2A-202ENST00000577541 YKT6O15498 198 aa0.78□□□□□ -2.28
TOP2A-202ENST00000577541 AQP9O43315 295 aa0.78□□□□□ -2.28
TOP2A-202ENST00000577541 CDK14O94921 469 aa0.78□□□□□ -2.28
TOP2A-202ENST00000577541 SOX14O95416 240 aa0.78□□□□□ -2.28
TOP2A-202ENST00000577541 SNRPAP09012 282 aaKnown RBP0.78□□□□□ -2.28
TOP2A-202ENST00000577541 SLC2A1P11166 492 aa0.78□□□□□ -2.28
TOP2A-202ENST00000577541 PTHLHP12272 177 aa0.78□□□□□ -2.28
TOP2A-202ENST00000577541 ZNF708P17019 499 aa0.78□□□□□ -2.28
TOP2A-202ENST00000577541 PRTN3P24158 256 aa0.78□□□□□ -2.28
TOP2A-202ENST00000577541 TTPAP49638 278 aa0.78□□□□□ -2.28
TOP2A-202ENST00000577541 ERFP50548 548 aa0.78□□□□□ -2.28
TOP2A-202ENST00000577541 ZNF83P51522 516 aa0.78□□□□□ -2.28
TOP2A-202ENST00000577541 MP68P56378 58 aa0.78□□□□□ -2.28
TOP2A-202ENST00000577541 TSPAN5P62079 268 aa0.78□□□□□ -2.28
TOP2A-202ENST00000577541 VSNL1P62760 191 aa0.78□□□□□ -2.28
TOP2A-202ENST00000577541 BSPH1Q075Z2 132 aa0.78□□□□□ -2.28
TOP2A-202ENST00000577541 HES1Q14469 280 aa0.78□□□□□ -2.28
TOP2A-202ENST00000577541 IHHQ14623 411 aa0.78□□□□□ -2.28
TOP2A-202ENST00000577541 ZNHIT3Q15649 155 aaPredicted RBP0.78□□□□□ -2.28
TOP2A-202ENST00000577541 ATP6AP1LQ52LC2 224 aa0.78□□□□□ -2.28
TOP2A-202ENST00000577541 MESTQ5EB52 335 aa0.78□□□□□ -2.28
TOP2A-202ENST00000577541 FAM162BQ5T6X4 162 aa0.78□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms