RNA–Protein interactions for RNA: ENST00000577228.1

CDH8-202, Transcript of cadherin 8, humanhuman

TSL 4

Gene CDH8, Length 539 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-202ENST00000577228 TRAV24A0A0B4J272 114 aa9.29□□□□□ -0.92
CDH8-202ENST00000577228 OR4C45A6NMZ5 311 aa9.29□□□□□ -0.92
CDH8-202ENST00000577228 NPIPB11E5RHQ5 1161 aa9.29□□□□□ -0.92
CDH8-202ENST00000577228 AP4M1O00189 453 aa9.29□□□□□ -0.92
CDH8-202ENST00000577228 HSD17B6O14756 317 aa9.29□□□□□ -0.92
CDH8-202ENST00000577228 CIB2O75838 187 aa9.29□□□□□ -0.92
CDH8-202ENST00000577228 GPR12P47775 334 aa9.29□□□□□ -0.92
CDH8-202ENST00000577228 KISS1Q15726 138 aa9.29□□□□□ -0.92
CDH8-202ENST00000577228 ZNF691Q5VV52 312 aa9.29□□□□□ -0.92
CDH8-202ENST00000577228 OR5M8Q8NGP6 311 aa9.29□□□□□ -0.92
CDH8-202ENST00000577228 OR8U1Q8NH10 309 aa9.29□□□□□ -0.92
CDH8-202ENST00000577228 CNIH3Q8TBE1 160 aa9.29□□□□□ -0.92
CDH8-202ENST00000577228 MRGPRDQ8TDS7 321 aa9.29□□□□□ -0.92
CDH8-202ENST00000577228 RNFT2Q96EX2 444 aa9.29□□□□□ -0.92
CDH8-202ENST00000577228 PELI1Q96FA3 418 aa9.29□□□□□ -0.92
CDH8-202ENST00000577228 PRR25Q96S07 402 aa9.29□□□□□ -0.92
CDH8-202ENST00000577228 IMPAD1Q9NX62 359 aa9.29□□□□□ -0.92
CDH8-202ENST00000577228 LSM4Q9Y4Z0 139 aaKnown RBP9.29□□□□□ -0.92
CDH8-202ENST00000577228 LINC01548A6NM66 108 aa9.28□□□□□ -0.92
CDH8-202ENST00000577228 NCBP2LA6PVI3 153 aaKnown RBP9.28□□□□□ -0.92
CDH8-202ENST00000577228 J3QLW9 94 aa9.28□□□□□ -0.92
CDH8-202ENST00000577228 SULT1B1O43704 296 aa9.28□□□□□ -0.92
CDH8-202ENST00000577228 RPLP1P05386 114 aaKnown RBP9.28□□□□□ -0.92
CDH8-202ENST00000577228 FCGR1AP12314 374 aa9.28□□□□□ -0.92
CDH8-202ENST00000577228 ZNF19P17023 458 aa9.28□□□□□ -0.92
CDH8-202ENST00000577228 SSTR5P35346 364 aa9.28□□□□□ -0.92
CDH8-202ENST00000577228 REG1BP48304 166 aa9.28□□□□□ -0.92
CDH8-202ENST00000577228 ALKBH1Q13686 389 aaKnown RBP9.28□□□□□ -0.92
CDH8-202ENST00000577228 IL13RA2Q14627 380 aa9.28□□□□□ -0.92
CDH8-202ENST00000577228 PNLIPRP3Q17RR3 467 aa9.28□□□□□ -0.92
CDH8-202ENST00000577228 DEFB136Q30KP8 78 aa9.28□□□□□ -0.92
CDH8-202ENST00000577228 CXorf66Q5JRM2 361 aaPredicted RBP9.28□□□□□ -0.92
CDH8-202ENST00000577228 NKAPLQ5M9Q1 402 aa9.28□□□□□ -0.92
CDH8-202ENST00000577228 C9orf66Q5T8R8 295 aa9.28□□□□□ -0.92
CDH8-202ENST00000577228 RSBN1Q5VWQ0 802 aaPredicted RBP9.28□□□□□ -0.92
CDH8-202ENST00000577228 LPCAT4Q643R3 524 aa9.28□□□□□ -0.92
CDH8-202ENST00000577228 ELP2Q6IA86 826 aa9.28□□□□□ -0.92
CDH8-202ENST00000577228 SLC16A12Q6ZSM3 486 aa9.28□□□□□ -0.92
CDH8-202ENST00000577228 MOB3BQ86TA1 216 aa9.28□□□□□ -0.92
CDH8-202ENST00000577228 TGIF2LXQ8IUE1 241 aa9.28□□□□□ -0.92
CDH8-202ENST00000577228 IZUMO1Q8IYV9 350 aa9.28□□□□□ -0.92
CDH8-202ENST00000577228 OR10A7Q8NGE5 316 aa9.28□□□□□ -0.92
CDH8-202ENST00000577228 OR5D14Q8NGL3 314 aa9.28□□□□□ -0.92
CDH8-202ENST00000577228 PLPPR1Q8TBJ4 325 aa9.28□□□□□ -0.92
CDH8-202ENST00000577228 EAF1Q96JC9 268 aaPredicted RBP9.28□□□□□ -0.92
CDH8-202ENST00000577228 C4orf36Q96KX1 117 aa9.28□□□□□ -0.92
CDH8-202ENST00000577228 GON7Q9BXV9 100 aa9.28□□□□□ -0.92
CDH8-202ENST00000577228 DCLRE1BQ9H816 532 aa9.28□□□□□ -0.92
CDH8-202ENST00000577228 AP4S1Q9Y587 144 aa9.28□□□□□ -0.92
CDH8-202ENST00000577228 IGHV3-72A0A0B4J1Y9 119 aa9.27□□□□□ -0.93
CDH8-202ENST00000577228 TRAV39A0A0B4J263 110 aa9.27□□□□□ -0.93
CDH8-202ENST00000577228 IGHV1-3A0A0C4DH29 117 aa9.27□□□□□ -0.93
CDH8-202ENST00000577228 A0A1W2PPE3 182 aa9.27□□□□□ -0.93
CDH8-202ENST00000577228 SEC14L6B5MCN3 397 aa9.27□□□□□ -0.93
CDH8-202ENST00000577228 J3QRE1 110 aa9.27□□□□□ -0.93
CDH8-202ENST00000577228 CCRL2O00421 344 aa9.27□□□□□ -0.93
CDH8-202ENST00000577228 ZFPL1O95159 310 aa9.27□□□□□ -0.93
CDH8-202ENST00000577228 GAPDHP04406 335 aaKnown RBP9.27□□□□□ -0.93
CDH8-202ENST00000577228 ECI1P42126 302 aa9.27□□□□□ -0.93
CDH8-202ENST00000577228 KCNJ3P48549 501 aa9.27□□□□□ -0.93
CDH8-202ENST00000577228 PAX5Q02548 391 aa9.27□□□□□ -0.93
CDH8-202ENST00000577228 ZNF816Q0VGE8 651 aaPredicted RBP9.27□□□□□ -0.93
CDH8-202ENST00000577228 FOXE3Q13461 319 aa9.27□□□□□ -0.93
CDH8-202ENST00000577228 GPR50Q13585 617 aa9.27□□□□□ -0.93
CDH8-202ENST00000577228 EBI3Q14213 229 aa9.27□□□□□ -0.93
CDH8-202ENST00000577228 KIR2DS1Q14954 304 aa9.27□□□□□ -0.93
CDH8-202ENST00000577228 PIGYQ3MUY2 71 aa9.27□□□□□ -0.93
CDH8-202ENST00000577228 LCNL1Q6ZST4 164 aa9.27□□□□□ -0.93
CDH8-202ENST00000577228 SERPINA12Q8IW75 414 aa9.27□□□□□ -0.93
CDH8-202ENST00000577228 ACBD7Q8N6N7 88 aa9.27□□□□□ -0.93
CDH8-202ENST00000577228 PXT1Q8NFP0 134 aa9.27□□□□□ -0.93
CDH8-202ENST00000577228 TNFAIP8L1Q8WVP5 186 aa9.27□□□□□ -0.93
CDH8-202ENST00000577228 TRUB1Q8WWH5 349 aaKnown RBP9.27□□□□□ -0.93
CDH8-202ENST00000577228 CPNE2Q96FN4 548 aaPredicted RBP9.27□□□□□ -0.93
CDH8-202ENST00000577228 MRPL48Q96GC5 212 aaKnown RBP9.27□□□□□ -0.93
CDH8-202ENST00000577228 ASCL2Q99929 193 aa9.27□□□□□ -0.93
CDH8-202ENST00000577228 ABCG5Q9H222 651 aa9.27□□□□□ -0.93
CDH8-202ENST00000577228 LIN7CQ9NUP9 197 aaKnown RBP9.27□□□□□ -0.93
CDH8-202ENST00000577228 OAZ3Q9UMX2 235 aa9.27□□□□□ -0.93
CDH8-202ENST00000577228 SAC3D1A6NKF1 404 aa9.26□□□□□ -0.93
CDH8-202ENST00000577228 C3orf84H3BNL1 204 aa9.26□□□□□ -0.93
CDH8-202ENST00000577228 RRP9O43818 475 aaKnown RBP9.26□□□□□ -0.93
CDH8-202ENST00000577228 MPZL2O60487 215 aa9.26□□□□□ -0.93
CDH8-202ENST00000577228 ELANEP08246 267 aa9.26□□□□□ -0.93
CDH8-202ENST00000577228 RPSAP08865 295 aaKnown RBP9.26□□□□□ -0.93
CDH8-202ENST00000577228 CDX1P47902 265 aaPredicted RBP9.26□□□□□ -0.93
CDH8-202ENST00000577228 RSU1Q15404 277 aa9.26□□□□□ -0.93
CDH8-202ENST00000577228 KLHL22Q53GT1 634 aa9.26□□□□□ -0.93
CDH8-202ENST00000577228 SATL1Q86VE3 508 aa9.26□□□□□ -0.93
CDH8-202ENST00000577228 PARP16Q8N5Y8 322 aa9.26□□□□□ -0.93
CDH8-202ENST00000577228 Q8N6K4 173 aa9.26□□□□□ -0.93
CDH8-202ENST00000577228 Q8N9W7 124 aa9.26□□□□□ -0.93
CDH8-202ENST00000577228 OR10K1Q8NGX5 313 aa9.26□□□□□ -0.93
CDH8-202ENST00000577228 OR2T10Q8NGZ9 312 aa9.26□□□□□ -0.93
CDH8-202ENST00000577228 TSEN15Q8WW01 171 aaKnown RBP9.26□□□□□ -0.93
CDH8-202ENST00000577228 CENPNQ96H22 339 aaPredicted RBP9.26□□□□□ -0.93
CDH8-202ENST00000577228 GPER1Q99527 375 aa9.26□□□□□ -0.93
CDH8-202ENST00000577228 DPCDQ9BVM2 203 aaPredicted RBP9.26□□□□□ -0.93
CDH8-202ENST00000577228 FAM192AQ9GZU8 254 aa9.26□□□□□ -0.93
CDH8-202ENST00000577228 FAM118AQ9NWS6 357 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms