RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 HTR3BO95264 441 aa6.51□□□□□ -1.37
CCDC40-215ENST00000576033 FSTL3O95633 263 aa6.51□□□□□ -1.37
CCDC40-215ENST00000576033 OR2H2O95918 312 aa6.51□□□□□ -1.37
CCDC40-215ENST00000576033 KNG1P01042 644 aa6.51□□□□□ -1.37
CCDC40-215ENST00000576033 FSHBP01225 129 aa6.51□□□□□ -1.37
CCDC40-215ENST00000576033 UBBP0CG47 229 aa6.51□□□□□ -1.37
CCDC40-215ENST00000576033 TRAPPC2P0DI81 140 aa6.51□□□□□ -1.37
CCDC40-215ENST00000576033 TRAPPC2BP0DI82 140 aa6.51□□□□□ -1.37
CCDC40-215ENST00000576033 VSIG8P0DPA2 414 aa6.51□□□□□ -1.37
CCDC40-215ENST00000576033 MMP9P14780 707 aa6.51□□□□□ -1.37
CCDC40-215ENST00000576033 ARSBP15848 533 aa6.51□□□□□ -1.37
CCDC40-215ENST00000576033 GDNFP39905 211 aa6.51□□□□□ -1.37
CCDC40-215ENST00000576033 OR3A1P47881 315 aa6.51□□□□□ -1.37
CCDC40-215ENST00000576033 ARF6P62330 175 aa6.51□□□□□ -1.37
CCDC40-215ENST00000576033 SSBP1Q04837 148 aaKnown RBP6.51□□□□□ -1.37
CCDC40-215ENST00000576033 ATXN7L3Q14CW9 347 aaPredicted RBP6.51□□□□□ -1.37
CCDC40-215ENST00000576033 UTF1Q5T230 341 aa6.51□□□□□ -1.37
CCDC40-215ENST00000576033 ATPAF1Q5TC12 328 aaPredicted RBP6.51□□□□□ -1.37
CCDC40-215ENST00000576033 AWAT2Q6E213 333 aa6.51□□□□□ -1.37
CCDC40-215ENST00000576033 GLIPR1L1Q6UWM5 242 aa6.51□□□□□ -1.37
CCDC40-215ENST00000576033 ASCL4Q6XD76 172 aa6.51□□□□□ -1.37
CCDC40-215ENST00000576033 BRD3OSQ6XYD6 125 aa6.51□□□□□ -1.37
CCDC40-215ENST00000576033 NLRC3Q7RTR2 1065 aa6.51□□□□□ -1.37
CCDC40-215ENST00000576033 C5orf24Q7Z6I8 188 aa6.51□□□□□ -1.37
CCDC40-215ENST00000576033 ZNF554Q86TJ5 538 aa6.51□□□□□ -1.37
CCDC40-215ENST00000576033 FAM185AQ8N0U4 392 aa6.51□□□□□ -1.37
CCDC40-215ENST00000576033 FAM58AQ8N1B3 248 aa6.51□□□□□ -1.37
CCDC40-215ENST00000576033 Q8N7P7 452 aa6.51□□□□□ -1.37
CCDC40-215ENST00000576033 DTX3Q8N9I9 347 aa6.51□□□□□ -1.37
CCDC40-215ENST00000576033 TMEM104Q8NE00 496 aa6.51□□□□□ -1.37
CCDC40-215ENST00000576033 GPX8Q8TED1 209 aa6.51□□□□□ -1.37
CCDC40-215ENST00000576033 TAF15Q92804 592 aaKnown RBP eCLIP6.51□□□□□ -1.37
CCDC40-215ENST00000576033 UPRTQ96BW1 309 aa6.51□□□□□ -1.37
CCDC40-215ENST00000576033 SDSLQ96GA7 329 aa6.51□□□□□ -1.37
CCDC40-215ENST00000576033 POM121Q96HA1 1249 aa6.51□□□□□ -1.37
CCDC40-215ENST00000576033 PCGF1Q9BSM1 259 aa6.51□□□□□ -1.37
CCDC40-215ENST00000576033 SHARPINQ9H0F6 387 aa6.51□□□□□ -1.37
CCDC40-215ENST00000576033 BANF2Q9H503 90 aa6.51□□□□□ -1.37
CCDC40-215ENST00000576033 C7orf69Q9H7B7 122 aa6.51□□□□□ -1.37
CCDC40-215ENST00000576033 DIABLOQ9NR28 239 aa6.51□□□□□ -1.37
CCDC40-215ENST00000576033 SIRT7Q9NRC8 400 aa6.51□□□□□ -1.37
CCDC40-215ENST00000576033 GHRLQ9UBU3 117 aa6.51□□□□□ -1.37
CCDC40-215ENST00000576033 MTFP1Q9UDX5 166 aa6.51□□□□□ -1.37
CCDC40-215ENST00000576033 ZNF107Q9UII5 783 aaPredicted RBP6.51□□□□□ -1.37
CCDC40-215ENST00000576033 RPUSD1Q9UJJ7 312 aaKnown RBP6.51□□□□□ -1.37
CCDC40-215ENST00000576033 RAB22AQ9UL26 194 aa6.51□□□□□ -1.37
CCDC40-215ENST00000576033 ING4Q9UNL4 249 aa6.51□□□□□ -1.37
CCDC40-215ENST00000576033 MRPS28Q9Y2Q9 187 aaKnown RBP6.51□□□□□ -1.37
CCDC40-215ENST00000576033 ANK2Q01484 3957 aa6.5□□□□□ -1.37
CCDC40-215ENST00000576033 A0A0A6YYD4 124 aa6.5□□□□□ -1.37
CCDC40-215ENST00000576033 TRAV39A0A0B4J263 110 aa6.5□□□□□ -1.37
CCDC40-215ENST00000576033 TRAV24A0A0B4J272 114 aa6.5□□□□□ -1.37
CCDC40-215ENST00000576033 FAM172BPA6NC97 362 aa6.5□□□□□ -1.37
CCDC40-215ENST00000576033 SLC33A1O00400 549 aaPredicted RBP6.5□□□□□ -1.37
CCDC40-215ENST00000576033 GEMIN2O14893 280 aaKnown RBP6.5□□□□□ -1.37
CCDC40-215ENST00000576033 NDUFB3O43676 98 aa6.5□□□□□ -1.37
CCDC40-215ENST00000576033 SCGNO76038 276 aa6.5□□□□□ -1.37
CCDC40-215ENST00000576033 ECDO95905 644 aaPredicted RBP6.5□□□□□ -1.37
CCDC40-215ENST00000576033 TK1P04183 234 aa6.5□□□□□ -1.37
CCDC40-215ENST00000576033 MELTFP08582 738 aa6.5□□□□□ -1.37
CCDC40-215ENST00000576033 GABRR1P24046 479 aa6.5□□□□□ -1.37
CCDC40-215ENST00000576033 PTGFRP43088 359 aa6.5□□□□□ -1.37
CCDC40-215ENST00000576033 RAG2P55895 527 aa6.5□□□□□ -1.37
CCDC40-215ENST00000576033 PAX8Q06710 450 aa6.5□□□□□ -1.37
CCDC40-215ENST00000576033 KCNJ8Q15842 424 aa6.5□□□□□ -1.37
CCDC40-215ENST00000576033 MOGAT2Q3SYC2 334 aa6.5□□□□□ -1.37
CCDC40-215ENST00000576033 ZNF260Q3ZCT1 412 aa6.5□□□□□ -1.37
CCDC40-215ENST00000576033 SLC22A6Q4U2R8 563 aa6.5□□□□□ -1.37
CCDC40-215ENST00000576033 LRRC10Q5BKY1 277 aa6.5□□□□□ -1.37
CCDC40-215ENST00000576033 RAB12Q6IQ22 244 aa6.5□□□□□ -1.37
CCDC40-215ENST00000576033 FAM53AQ6NSI3 398 aaPredicted RBP6.5□□□□□ -1.37
CCDC40-215ENST00000576033 SLC36A1Q7Z2H8 476 aa6.5□□□□□ -1.37
CCDC40-215ENST00000576033 VMO1Q7Z5L0 202 aa6.5□□□□□ -1.37
CCDC40-215ENST00000576033 MKXQ8IYA7 352 aa6.5□□□□□ -1.37
CCDC40-215ENST00000576033 BPIFB2Q8N4F0 458 aa6.5□□□□□ -1.37
CCDC40-215ENST00000576033 FAM89BQ8N5H3 189 aa6.5□□□□□ -1.37
CCDC40-215ENST00000576033 LY6G5BQ8NDX9 201 aa6.5□□□□□ -1.37
CCDC40-215ENST00000576033 UBALD1Q8TB05 177 aa6.5□□□□□ -1.37
CCDC40-215ENST00000576033 PLPPR1Q8TBJ4 325 aa6.5□□□□□ -1.37
CCDC40-215ENST00000576033 ENKURQ8TC29 256 aa6.5□□□□□ -1.37
CCDC40-215ENST00000576033 GCDHQ92947 438 aaPredicted RBP6.5□□□□□ -1.37
CCDC40-215ENST00000576033 CREB3L1Q96BA8 519 aa6.5□□□□□ -1.37
CCDC40-215ENST00000576033 COQ2Q96H96 371 aa6.5□□□□□ -1.37
CCDC40-215ENST00000576033 SLC6A7Q99884 636 aa6.5□□□□□ -1.37
CCDC40-215ENST00000576033 NICN1Q9BSH3 213 aa6.5□□□□□ -1.37
CCDC40-215ENST00000576033 TM2D1Q9BX74 207 aa6.5□□□□□ -1.37
CCDC40-215ENST00000576033 SIRPDQ9H106 197 aa6.5□□□□□ -1.37
CCDC40-215ENST00000576033 LPAR5Q9H1C0 372 aa6.5□□□□□ -1.37
CCDC40-215ENST00000576033 MMP28Q9H239 520 aa6.5□□□□□ -1.37
CCDC40-215ENST00000576033 SCPEP1Q9HB40 452 aa6.5□□□□□ -1.37
CCDC40-215ENST00000576033 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.5□□□□□ -1.37
CCDC40-215ENST00000576033 RASL12Q9NYN1 266 aa6.5□□□□□ -1.37
CCDC40-215ENST00000576033 COPZ2Q9P299 210 aa6.5□□□□□ -1.37
CCDC40-215ENST00000576033 ANAPC10Q9UM13 185 aa6.5□□□□□ -1.37
CCDC40-215ENST00000576033 MRPS7Q9Y2R9 242 aaKnown RBP6.5□□□□□ -1.37
CCDC40-215ENST00000576033 POLR3KQ9Y2Y1 108 aaPredicted RBP6.5□□□□□ -1.37
CCDC40-215ENST00000576033 ATRQ13535 2644 aa6.5□□□□□ -1.37
CCDC40-215ENST00000576033 TRAV18A0A075B6X5 111 aa6.49□□□□□ -1.37
CCDC40-215ENST00000576033 PPIAL4CA0A0B4J2A2 164 aa6.49□□□□□ -1.37
CCDC40-215ENST00000576033 KIR2DS1A0A191URI9 304 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms