RNA–Protein interactions for RNA: ENST00000575156.5

ERCC4-207, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC4, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-207ENST00000575156 COPZ2Q9P299 210 aa11.52□□□□□ -0.57
ERCC4-207ENST00000575156 KIF25Q9UIL4 384 aa11.52□□□□□ -0.57
ERCC4-207ENST00000575156 PPIAL4EA0A075B759 164 aa11.51□□□□□ -0.57
ERCC4-207ENST00000575156 TRBV6-6A0A0A6YYG2 114 aa11.51□□□□□ -0.57
ERCC4-207ENST00000575156 IGKV1-6A0A0C4DH72 117 aa11.51□□□□□ -0.57
ERCC4-207ENST00000575156 PPIAL4DF5H284 164 aa11.51□□□□□ -0.57
ERCC4-207ENST00000575156 LGALS8O00214 317 aa11.51□□□□□ -0.57
ERCC4-207ENST00000575156 PPIAL4FP0DN26 164 aa11.51□□□□□ -0.57
ERCC4-207ENST00000575156 OR5H8P0DN80 308 aa11.51□□□□□ -0.57
ERCC4-207ENST00000575156 MUC1P15941 1255 aaPredicted RBP11.51□□□□□ -0.57
ERCC4-207ENST00000575156 BCAP31P51572 246 aa11.51□□□□□ -0.57
ERCC4-207ENST00000575156 TSPAN5P62079 268 aa11.51□□□□□ -0.57
ERCC4-207ENST00000575156 HERPUD1Q15011 391 aa11.51□□□□□ -0.57
ERCC4-207ENST00000575156 C1orf87Q8N0U7 546 aa11.51□□□□□ -0.57
ERCC4-207ENST00000575156 DCTN5Q9BTE1 182 aa11.51□□□□□ -0.57
ERCC4-207ENST00000575156 RAB1BQ9H0U4 201 aa11.51□□□□□ -0.57
ERCC4-207ENST00000575156 RIMS4Q9H426 269 aaPredicted RBP11.51□□□□□ -0.57
ERCC4-207ENST00000575156 SCP2D1Q9UJQ7 156 aa11.51□□□□□ -0.57
ERCC4-207ENST00000575156 TRAPPC2LQ9UL33 140 aa11.51□□□□□ -0.57
ERCC4-207ENST00000575156 PPIAL4AQ9Y536 164 aa11.51□□□□□ -0.57
ERCC4-207ENST00000575156 FBN2P35556 2912 aa11.51□□□□□ -0.57
ERCC4-207ENST00000575156 RAI1Q7Z5J4 1906 aaPredicted RBP11.51□□□□□ -0.57
ERCC4-207ENST00000575156 CLEC18AA5D8T8 446 aa11.51□□□□□ -0.57
ERCC4-207ENST00000575156 FCN3O75636 299 aa11.51□□□□□ -0.57
ERCC4-207ENST00000575156 NPY4RP50391 375 aa11.51□□□□□ -0.57
ERCC4-207ENST00000575156 ZMYND11Q15326 602 aa11.51□□□□□ -0.57
ERCC4-207ENST00000575156 HFEQ30201 348 aa11.51□□□□□ -0.57
ERCC4-207ENST00000575156 KRBOX4Q5JUW0 171 aa11.51□□□□□ -0.57
ERCC4-207ENST00000575156 CLEC18BQ6UXF7 455 aa11.51□□□□□ -0.57
ERCC4-207ENST00000575156 ZNF788Q6ZQV5 615 aa11.51□□□□□ -0.57
ERCC4-207ENST00000575156 Q6ZS49 121 aa11.51□□□□□ -0.57
ERCC4-207ENST00000575156 CLEC18CQ8NCF0 446 aa11.51□□□□□ -0.57
ERCC4-207ENST00000575156 SDSLQ96GA7 329 aa11.51□□□□□ -0.57
ERCC4-207ENST00000575156 SNX22Q96L94 193 aa11.51□□□□□ -0.57
ERCC4-207ENST00000575156 PRRT1Q99946 306 aa11.51□□□□□ -0.57
ERCC4-207ENST00000575156 CLEC4MQ9H2X3 399 aaPredicted RBP11.51□□□□□ -0.57
ERCC4-207ENST00000575156 PLEKHF2Q9H8W4 249 aa11.51□□□□□ -0.57
ERCC4-207ENST00000575156 SEBOXQ9HB31 216 aaPredicted RBP11.51□□□□□ -0.57
ERCC4-207ENST00000575156 VSIG4Q9Y279 399 aa11.51□□□□□ -0.57
ERCC4-207ENST00000575156 ALG5Q9Y673 324 aa11.51□□□□□ -0.57
ERCC4-207ENST00000575156 CELSR2Q9HCU4 2923 aa11.51□□□□□ -0.57
ERCC4-207ENST00000575156 MEIKINA0A087WXM9 373 aa11.5□□□□□ -0.57
ERCC4-207ENST00000575156 TMEM30CPA0ZSE6 113 aa11.5□□□□□ -0.57
ERCC4-207ENST00000575156 TRDCB7Z8K6 153 aa11.5□□□□□ -0.57
ERCC4-207ENST00000575156 K7N7A8 449 aa11.5□□□□□ -0.57
ERCC4-207ENST00000575156 FABP7O15540 132 aa11.5□□□□□ -0.57
ERCC4-207ENST00000575156 RP2O75695 350 aa11.5□□□□□ -0.57
ERCC4-207ENST00000575156 TK1P04183 234 aa11.5□□□□□ -0.57
ERCC4-207ENST00000575156 COL8A1P27658 744 aa11.5□□□□□ -0.57
ERCC4-207ENST00000575156 SEC61A1P61619 476 aaKnown RBP11.5□□□□□ -0.57
ERCC4-207ENST00000575156 KIAA2026Q5HYC2 2103 aa11.5□□□□□ -0.57
ERCC4-207ENST00000575156 AADACL3Q5VUY0 350 aa11.5□□□□□ -0.57
ERCC4-207ENST00000575156 ZNF660Q6AZW8 331 aaPredicted RBP11.5□□□□□ -0.57
ERCC4-207ENST00000575156 SP5Q6BEB4 398 aaPredicted RBP11.5□□□□□ -0.57
ERCC4-207ENST00000575156 SLC35E4Q6ICL7 350 aa11.5□□□□□ -0.57
ERCC4-207ENST00000575156 LYPD2Q6UXB3 125 aa11.5□□□□□ -0.57
ERCC4-207ENST00000575156 PRR18Q8N4B5 295 aa11.5□□□□□ -0.57
ERCC4-207ENST00000575156 ARRDC1Q8N5I2 433 aa11.5□□□□□ -0.57
ERCC4-207ENST00000575156 NECAP2Q9NVZ3 263 aa11.5□□□□□ -0.57
ERCC4-207ENST00000575156 USP9YO00507 2555 aaPredicted RBP11.5□□□□□ -0.57
ERCC4-207ENST00000575156 TRAV38-1A0A0B4J264 116 aa11.5□□□□□ -0.57
ERCC4-207ENST00000575156 OR5H14A6NHG9 310 aa11.5□□□□□ -0.57
ERCC4-207ENST00000575156 BET1O15155 118 aa11.5□□□□□ -0.57
ERCC4-207ENST00000575156 RLN1P04808 185 aa11.5□□□□□ -0.57
ERCC4-207ENST00000575156 VSIG10L2P0DP72 767 aa11.5□□□□□ -0.57
ERCC4-207ENST00000575156 NFYAP23511 347 aaPredicted RBP11.5□□□□□ -0.57
ERCC4-207ENST00000575156 BAMBIQ13145 260 aa11.5□□□□□ -0.57
ERCC4-207ENST00000575156 SRSF7Q16629 238 aaKnown RBP eCLIP11.5□□□□□ -0.57
ERCC4-207ENST00000575156 ATPAF1Q5TC12 328 aaPredicted RBP11.5□□□□□ -0.57
ERCC4-207ENST00000575156 LHFPL1Q86WI0 220 aa11.5□□□□□ -0.57
ERCC4-207ENST00000575156 ZNF561Q8N587 486 aa11.5□□□□□ -0.57
ERCC4-207ENST00000575156 TMEM185AQ8NFB2 350 aa11.5□□□□□ -0.57
ERCC4-207ENST00000575156 TERB2Q8NHR7 220 aa11.5□□□□□ -0.57
ERCC4-207ENST00000575156 MARCH1Q8TCQ1 289 aa11.5□□□□□ -0.57
ERCC4-207ENST00000575156 GIMAP1Q8WWP7 306 aa11.5□□□□□ -0.57
ERCC4-207ENST00000575156 ZNF2Q9BSG1 426 aaPredicted RBP11.5□□□□□ -0.57
ERCC4-207ENST00000575156 MBNL3Q9NUK0 354 aaKnown RBP11.5□□□□□ -0.57
ERCC4-207ENST00000575156 TANC2Q9HCD6 1990 aa11.5□□□□□ -0.57
ERCC4-207ENST00000575156 CSMD2Q7Z408 3487 aa11.49□□□□□ -0.57
ERCC4-207ENST00000575156 A0A0A6YYJ9 748 aa11.49□□□□□ -0.57
ERCC4-207ENST00000575156 TNFRSF13BO14836 293 aaPredicted RBP11.49□□□□□ -0.57
ERCC4-207ENST00000575156 TMPRSS2O15393 492 aa11.49□□□□□ -0.57
ERCC4-207ENST00000575156 PEX14O75381 377 aa11.49□□□□□ -0.57
ERCC4-207ENST00000575156 BTG1P62324 171 aa11.49□□□□□ -0.57
ERCC4-207ENST00000575156 HLA-DRB3P79483 266 aa11.49□□□□□ -0.57
ERCC4-207ENST00000575156 FAM53AQ6NSI3 398 aaPredicted RBP11.49□□□□□ -0.57
ERCC4-207ENST00000575156 TMED4Q7Z7H5 227 aa11.49□□□□□ -0.57
ERCC4-207ENST00000575156 OR13A1Q8NGR1 328 aa11.49□□□□□ -0.57
ERCC4-207ENST00000575156 MRGPRDQ8TDS7 321 aa11.49□□□□□ -0.57
ERCC4-207ENST00000575156 CAPSLQ8WWF8 208 aa11.49□□□□□ -0.57
ERCC4-207ENST00000575156 KIRREL1Q96J84 757 aa11.49□□□□□ -0.57
ERCC4-207ENST00000575156 SEC22CQ9BRL7 303 aa11.49□□□□□ -0.57
ERCC4-207ENST00000575156 TMEM246Q9BRR3 403 aa11.49□□□□□ -0.57
ERCC4-207ENST00000575156 ZNF665Q9H7R5 613 aa11.49□□□□□ -0.57
ERCC4-207ENST00000575156 J3QKU1 62 aa11.48□□□□□ -0.57
ERCC4-207ENST00000575156 MGST3O14880 152 aa11.48□□□□□ -0.57
ERCC4-207ENST00000575156 SIGLEC5O15389 551 aa11.48□□□□□ -0.57
ERCC4-207ENST00000575156 DAOP14920 347 aa11.48□□□□□ -0.57
ERCC4-207ENST00000575156 PI3P19957 117 aa11.48□□□□□ -0.57
ERCC4-207ENST00000575156 FCGR2CP31995 323 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms