RNA–Protein interactions for RNA: ENST00000574322.5

CTDNEP1-210, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-210ENST00000574322 C4orf17Q53FE4 359 aa23.96■■□□□ 1.43
CTDNEP1-210ENST00000574322 FAM90A1Q86YD7 464 aa23.96■■□□□ 1.43
CTDNEP1-210ENST00000574322 SLC38A6Q8IZM9 456 aa23.96■■□□□ 1.43
CTDNEP1-210ENST00000574322 GRPEL2Q8TAA5 225 aa23.96■■□□□ 1.43
CTDNEP1-210ENST00000574322 PLPPR1Q8TBJ4 325 aa23.96■■□□□ 1.43
CTDNEP1-210ENST00000574322 MEGF10Q96KG7 1140 aa23.96■■□□□ 1.43
CTDNEP1-210ENST00000574322 PCDHB10Q9UN67 800 aa23.96■■□□□ 1.43
CTDNEP1-210ENST00000574322 TUSC2O75896 110 aa23.95■■□□□ 1.42
CTDNEP1-210ENST00000574322 PPYP01298 95 aa23.95■■□□□ 1.42
CTDNEP1-210ENST00000574322 AADACP22760 399 aa23.95■■□□□ 1.42
CTDNEP1-210ENST00000574322 RSRP1Q9BUV0 290 aa23.95■■□□□ 1.42
CTDNEP1-210ENST00000574322 RAB18Q9NP72 206 aa23.95■■□□□ 1.42
CTDNEP1-210ENST00000574322 NGBQ9NPG2 151 aa23.95■■□□□ 1.42
CTDNEP1-210ENST00000574322 WIPI2Q9Y4P8 454 aa23.95■■□□□ 1.42
CTDNEP1-210ENST00000574322 SRRM5B3KS81 715 aa23.94■■□□□ 1.42
CTDNEP1-210ENST00000574322 PLA2G2AP14555 144 aa23.94■■□□□ 1.42
CTDNEP1-210ENST00000574322 HLA-DRB3P79483 266 aa23.94■■□□□ 1.42
CTDNEP1-210ENST00000574322 SGPP2Q8IWX5 399 aa23.94■■□□□ 1.42
CTDNEP1-210ENST00000574322 WFIKKN1Q96NZ8 548 aa23.94■■□□□ 1.42
CTDNEP1-210ENST00000574322 CABLES2Q9BTV7 478 aa23.94■■□□□ 1.42
CTDNEP1-210ENST00000574322 MBNL3Q9NUK0 354 aaKnown RBP23.94■■□□□ 1.42
CTDNEP1-210ENST00000574322 IGKV1-6A0A0C4DH72 117 aa23.93■■□□□ 1.42
CTDNEP1-210ENST00000574322 ABCD4O14678 606 aa23.93■■□□□ 1.42
CTDNEP1-210ENST00000574322 KCNJ3P48549 501 aa23.93■■□□□ 1.42
CTDNEP1-210ENST00000574322 HERV-K104P61576 105 aa23.93■■□□□ 1.42
CTDNEP1-210ENST00000574322 SNRPD2P62316 118 aaKnown RBP23.93■■□□□ 1.42
CTDNEP1-210ENST00000574322 BSPH1Q075Z2 132 aa23.93■■□□□ 1.42
CTDNEP1-210ENST00000574322 ANKRD55Q3KP44 614 aa23.93■■□□□ 1.42
CTDNEP1-210ENST00000574322 KCTD9Q7L273 389 aa23.93■■□□□ 1.42
CTDNEP1-210ENST00000574322 LRRC29Q8WV35 223 aa23.93■■□□□ 1.42
CTDNEP1-210ENST00000574322 OR2V2Q96R30 315 aa23.93■■□□□ 1.42
CTDNEP1-210ENST00000574322 ZDHHC8Q9ULC8 765 aa23.93■■□□□ 1.42
CTDNEP1-210ENST00000574322 NPIPB11E5RHQ5 1161 aa23.93■■□□□ 1.42
CTDNEP1-210ENST00000574322 ZNF205O95201 554 aa23.93■■□□□ 1.42
CTDNEP1-210ENST00000574322 IFNA2P01563 188 aa23.93■■□□□ 1.42
CTDNEP1-210ENST00000574322 NFYAP23511 347 aaPredicted RBP23.93■■□□□ 1.42
CTDNEP1-210ENST00000574322 CHRNB4P30926 498 aa23.93■■□□□ 1.42
CTDNEP1-210ENST00000574322 GMFBP60983 142 aa23.93■■□□□ 1.42
CTDNEP1-210ENST00000574322 FGL1Q08830 312 aa23.93■■□□□ 1.42
CTDNEP1-210ENST00000574322 SLC9A3R2Q15599 337 aa23.93■■□□□ 1.42
CTDNEP1-210ENST00000574322 TOMM40LQ969M1 308 aa23.93■■□□□ 1.42
CTDNEP1-210ENST00000574322 GALNT14Q96FL9 552 aa23.93■■□□□ 1.42
CTDNEP1-210ENST00000574322 PCNX1Q96RV3 2341 aa23.92■■□□□ 1.42
CTDNEP1-210ENST00000574322 hCG_1807616A0A1W2PRN6 198 aa23.92■■□□□ 1.42
CTDNEP1-210ENST00000574322 RFPL4AA6NLU0 287 aa23.92■■□□□ 1.42
CTDNEP1-210ENST00000574322 RFPL4AL1F8VTS6 287 aa23.92■■□□□ 1.42
CTDNEP1-210ENST00000574322 DIRAS3O95661 229 aa23.92■■□□□ 1.42
CTDNEP1-210ENST00000574322 RCC1P18754 421 aaPredicted RBP23.92■■□□□ 1.42
CTDNEP1-210ENST00000574322 PIGPP57054 158 aa23.92■■□□□ 1.42
CTDNEP1-210ENST00000574322 OR14J1Q9UGF5 321 aa23.92■■□□□ 1.42
CTDNEP1-210ENST00000574322 CHD3Q12873 2000 aaKnown RBP23.91■■□□□ 1.42
CTDNEP1-210ENST00000574322 TRBV6-7A0A0A0MS04 114 aa23.91■■□□□ 1.42
CTDNEP1-210ENST00000574322 PSPNO60542 156 aa23.91■■□□□ 1.42
CTDNEP1-210ENST00000574322 ZNF81P51508 661 aa23.91■■□□□ 1.42
CTDNEP1-210ENST00000574322 FXYD4P59646 89 aa23.91■■□□□ 1.42
CTDNEP1-210ENST00000574322 PAX5Q02548 391 aa23.91■■□□□ 1.42
CTDNEP1-210ENST00000574322 IL19Q9UHD0 177 aa23.91■■□□□ 1.42
CTDNEP1-210ENST00000574322 CCSO14618 274 aa23.9■■□□□ 1.42
CTDNEP1-210ENST00000574322 LHBP01229 141 aa23.9■■□□□ 1.42
CTDNEP1-210ENST00000574322 ADH4P08319 380 aa23.9■■□□□ 1.42
CTDNEP1-210ENST00000574322 SLC35E4Q6ICL7 350 aa23.9■■□□□ 1.42
CTDNEP1-210ENST00000574322 SLC2A9Q9NRM0 540 aa23.9■■□□□ 1.42
CTDNEP1-210ENST00000574322 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP23.9■■□□□ 1.42
CTDNEP1-210ENST00000574322 ABCA11PQ4W5N1 156 aa23.9■■□□□ 1.42
CTDNEP1-210ENST00000574322 FAM185AQ8N0U4 392 aa23.9■■□□□ 1.42
CTDNEP1-210ENST00000574322 OR5T2Q8NGG2 359 aa23.9■■□□□ 1.42
CTDNEP1-210ENST00000574322 NAA60Q9H7X0 242 aa23.9■■□□□ 1.42
CTDNEP1-210ENST00000574322 TRAV14DV4A0A0A6YYC5 116 aa23.89■■□□□ 1.41
CTDNEP1-210ENST00000574322 TEX13DA0A0J9YY54 714 aaPredicted RBP23.89■■□□□ 1.41
CTDNEP1-210ENST00000574322 J3QKU1 62 aa23.89■■□□□ 1.41
CTDNEP1-210ENST00000574322 BET1O15155 118 aa23.89■■□□□ 1.41
CTDNEP1-210ENST00000574322 SPRY3O43610 288 aa23.89■■□□□ 1.41
CTDNEP1-210ENST00000574322 CYCSP99999 105 aaKnown RBP23.89■■□□□ 1.41
CTDNEP1-210ENST00000574322 ADIPOQQ15848 244 aa23.89■■□□□ 1.41
CTDNEP1-210ENST00000574322 GSG1LQ6UXU4 331 aa23.89■■□□□ 1.41
CTDNEP1-210ENST00000574322 C5orf24Q7Z6I8 188 aa23.89■■□□□ 1.41
CTDNEP1-210ENST00000574322 RTN4IP1Q8WWV3 396 aaPredicted RBP23.89■■□□□ 1.41
CTDNEP1-210ENST00000574322 ERGIC1Q969X5 290 aa23.89■■□□□ 1.41
CTDNEP1-210ENST00000574322 PDCD10Q9BUL8 212 aa23.89■■□□□ 1.41
CTDNEP1-210ENST00000574322 NMES1Q9C002 83 aa23.89■■□□□ 1.41
CTDNEP1-210ENST00000574322 KCNIP3Q9Y2W7 256 aa23.89■■□□□ 1.41
CTDNEP1-210ENST00000574322 TMEM30CPA0ZSE6 113 aa23.88■■□□□ 1.41
CTDNEP1-210ENST00000574322 IGHV1-46P01743 117 aa23.88■■□□□ 1.41
CTDNEP1-210ENST00000574322 SERPINF1P36955 418 aa23.88■■□□□ 1.41
CTDNEP1-210ENST00000574322 RBMXP38159 391 aaKnown RBP23.88■■□□□ 1.41
CTDNEP1-210ENST00000574322 CEBPDP49716 269 aaPredicted RBP23.88■■□□□ 1.41
CTDNEP1-210ENST00000574322 ADORA2A-AS1P86434 159 aa23.88■■□□□ 1.41
CTDNEP1-210ENST00000574322 HMGN3Q15651 99 aa23.88■■□□□ 1.41
CTDNEP1-210ENST00000574322 GCSAMQ8N6F7 178 aa23.88■■□□□ 1.41
CTDNEP1-210ENST00000574322 CCDC71LQ8N9Z2 235 aa23.88■■□□□ 1.41
CTDNEP1-210ENST00000574322 ITLN1Q8WWA0 313 aa23.88■■□□□ 1.41
CTDNEP1-210ENST00000574322 RNASE6Q93091 150 aaKnown RBP23.88■■□□□ 1.41
CTDNEP1-210ENST00000574322 EGR1P18146 543 aa23.87■■□□□ 1.41
CTDNEP1-210ENST00000574322 RND3P61587 244 aa23.87■■□□□ 1.41
CTDNEP1-210ENST00000574322 SORDQ00796 357 aa23.87■■□□□ 1.41
CTDNEP1-210ENST00000574322 ATXN7L3Q14CW9 347 aaPredicted RBP23.87■■□□□ 1.41
CTDNEP1-210ENST00000574322 SPRNQ5BIV9 151 aa23.87■■□□□ 1.41
CTDNEP1-210ENST00000574322 NCMAPQ5T1S8 102 aa23.87■■□□□ 1.41
CTDNEP1-210ENST00000574322 TMEM65Q6PI78 240 aa23.87■■□□□ 1.41
CTDNEP1-210ENST00000574322 H1FOOQ8IZA3 346 aaPredicted RBP23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms