RNA–Protein interactions for RNA: ENST00000574121.1

CCNE1-204, Transcript of cyclin E1, humanhuman

TSL 2

Gene CCNE1, Length 1,295 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-204ENST00000574121 BPIFB3P59826 476 aa12.91□□□□□ -0.34
CCNE1-204ENST00000574121 SCGB2A2Q13296 93 aa12.91□□□□□ -0.34
CCNE1-204ENST00000574121 NCR3LG1Q68D85 454 aa12.91□□□□□ -0.34
CCNE1-204ENST00000574121 TCF23Q7RTU1 214 aa12.91□□□□□ -0.34
CCNE1-204ENST00000574121 C6orf201Q7Z4U5 140 aa12.91□□□□□ -0.34
CCNE1-204ENST00000574121 TRAPPC6BQ86SZ2 158 aa12.91□□□□□ -0.34
CCNE1-204ENST00000574121 Q8N7P7 452 aa12.91□□□□□ -0.34
CCNE1-204ENST00000574121 OR10R2Q8NGX6 335 aa12.91□□□□□ -0.34
CCNE1-204ENST00000574121 NDNFQ8TB73 568 aa12.91□□□□□ -0.34
CCNE1-204ENST00000574121 AP3S1Q92572 193 aa12.91□□□□□ -0.34
CCNE1-204ENST00000574121 TBX15Q96SF7 602 aa12.91□□□□□ -0.34
CCNE1-204ENST00000574121 PCGF1Q9BSM1 259 aa12.91□□□□□ -0.34
CCNE1-204ENST00000574121 RIMS4Q9H426 269 aaPredicted RBP12.91□□□□□ -0.34
CCNE1-204ENST00000574121 RHBDL2Q9NX52 303 aa12.91□□□□□ -0.34
CCNE1-204ENST00000574121 CEPT1Q9Y6K0 416 aa12.91□□□□□ -0.34
CCNE1-204ENST00000574121 ARHGAP32A7KAX9 2087 aa12.91□□□□□ -0.34
CCNE1-204ENST00000574121 WNK2Q9Y3S1 2297 aa12.9□□□□□ -0.34
CCNE1-204ENST00000574121 A0A0A6YYH2 397 aa12.9□□□□□ -0.34
CCNE1-204ENST00000574121 A6NJ64 397 aa12.9□□□□□ -0.34
CCNE1-204ENST00000574121 ZNF729A6NN14 1252 aaPredicted RBP12.9□□□□□ -0.34
CCNE1-204ENST00000574121 H3BMQ9 156 aa12.9□□□□□ -0.34
CCNE1-204ENST00000574121 MT-ND4P03905 459 aa12.9□□□□□ -0.34
CCNE1-204ENST00000574121 CCL3L1P16619 93 aa12.9□□□□□ -0.34
CCNE1-204ENST00000574121 GZMHP20718 246 aa12.9□□□□□ -0.34
CCNE1-204ENST00000574121 SOX6P35712 828 aa12.9□□□□□ -0.34
CCNE1-204ENST00000574121 SRP14P37108 136 aaKnown RBP12.9□□□□□ -0.34
CCNE1-204ENST00000574121 TMEM50BP56557 158 aa12.9□□□□□ -0.34
CCNE1-204ENST00000574121 ERVFRD-1P60508 538 aa12.9□□□□□ -0.34
CCNE1-204ENST00000574121 PLA2G7Q13093 441 aa12.9□□□□□ -0.34
CCNE1-204ENST00000574121 SPCS2Q15005 226 aa12.9□□□□□ -0.34
CCNE1-204ENST00000574121 TRAT1Q6PIZ9 186 aa12.9□□□□□ -0.34
CCNE1-204ENST00000574121 BRICD5Q6PL45 260 aa12.9□□□□□ -0.34
CCNE1-204ENST00000574121 Q6ZTK2 550 aa12.9□□□□□ -0.34
CCNE1-204ENST00000574121 VMO1Q7Z5L0 202 aa12.9□□□□□ -0.34
CCNE1-204ENST00000574121 ZNF554Q86TJ5 538 aa12.9□□□□□ -0.34
CCNE1-204ENST00000574121 C11orf42Q8N5U0 333 aa12.9□□□□□ -0.34
CCNE1-204ENST00000574121 RAB3CQ96E17 227 aa12.9□□□□□ -0.34
CCNE1-204ENST00000574121 SULT4A1Q9BR01 284 aa12.9□□□□□ -0.34
CCNE1-204ENST00000574121 RBM38Q9H0Z9 239 aaKnown RBP12.9□□□□□ -0.34
CCNE1-204ENST00000574121 ATG5Q9H1Y0 275 aa12.9□□□□□ -0.34
CCNE1-204ENST00000574121 ABCG5Q9H222 651 aa12.9□□□□□ -0.34
CCNE1-204ENST00000574121 LINC00574Q9H8X3 128 aa12.9□□□□□ -0.34
CCNE1-204ENST00000574121 RAB9BQ9NP90 201 aa12.9□□□□□ -0.34
CCNE1-204ENST00000574121 ING3Q9NXR8 418 aa12.9□□□□□ -0.34
CCNE1-204ENST00000574121 UBE2QL1A1L167 161 aa12.89□□□□□ -0.35
CCNE1-204ENST00000574121 SERPINE3A8MV23 424 aa12.89□□□□□ -0.35
CCNE1-204ENST00000574121 CGB3P0DN86 165 aa12.89□□□□□ -0.35
CCNE1-204ENST00000574121 CGB7P0DN87 165 aa12.89□□□□□ -0.35
CCNE1-204ENST00000574121 ZNF182P17025 639 aaPredicted RBP12.89□□□□□ -0.35
CCNE1-204ENST00000574121 SRD5A1P18405 259 aa12.89□□□□□ -0.35
CCNE1-204ENST00000574121 GUCA2AQ02747 115 aa12.89□□□□□ -0.35
CCNE1-204ENST00000574121 GPR157Q5UAW9 335 aa12.89□□□□□ -0.35
CCNE1-204ENST00000574121 HEPN1Q6WQI6 88 aa12.89□□□□□ -0.35
CCNE1-204ENST00000574121 PHF21AQ96BD5 680 aa12.89□□□□□ -0.35
CCNE1-204ENST00000574121 SLC25A38Q96DW6 304 aa12.89□□□□□ -0.35
CCNE1-204ENST00000574121 ARHGAP5-AS1Q96IT6 56 aa12.89□□□□□ -0.35
CCNE1-204ENST00000574121 CMTM3Q96MX0 182 aa12.89□□□□□ -0.35
CCNE1-204ENST00000574121 FAAP24Q9BTP7 215 aa12.89□□□□□ -0.35
CCNE1-204ENST00000574121 PECRQ9BY49 303 aa12.89□□□□□ -0.35
CCNE1-204ENST00000574121 HEXA-AS1Q9H8Q6 139 aa12.89□□□□□ -0.35
CCNE1-204ENST00000574121 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.89□□□□□ -0.35
CCNE1-204ENST00000574121 NDUFA13Q9P0J0 144 aa12.89□□□□□ -0.35
CCNE1-204ENST00000574121 TRAV40A0A0B4J280 105 aa12.88□□□□□ -0.35
CCNE1-204ENST00000574121 KBTBD11-OT1A0A1B0GTJ5 212 aa12.88□□□□□ -0.35
CCNE1-204ENST00000574121 SMIM31A0A1B0GVY4 71 aa12.88□□□□□ -0.35
CCNE1-204ENST00000574121 ORC5O43913 435 aa12.88□□□□□ -0.35
CCNE1-204ENST00000574121 CLPXO76031 633 aa12.88□□□□□ -0.35
CCNE1-204ENST00000574121 NAPSAO96009 420 aa12.88□□□□□ -0.35
CCNE1-204ENST00000574121 FAM157CP0CG43 387 aa12.88□□□□□ -0.35
CCNE1-204ENST00000574121 IGHV1-8P0DP01 117 aa12.88□□□□□ -0.35
CCNE1-204ENST00000574121 HIST1H1DP16402 221 aaKnown RBP12.88□□□□□ -0.35
CCNE1-204ENST00000574121 GLP1RP43220 463 aa12.88□□□□□ -0.35
CCNE1-204ENST00000574121 MOGAT2Q3SYC2 334 aa12.88□□□□□ -0.35
CCNE1-204ENST00000574121 KLF17Q5JT82 389 aaPredicted RBP12.88□□□□□ -0.35
CCNE1-204ENST00000574121 PLAC9Q5JTB6 97 aa12.88□□□□□ -0.35
CCNE1-204ENST00000574121 UBE2NLQ5JXB2 153 aa12.88□□□□□ -0.35
CCNE1-204ENST00000574121 C6orf183Q5T699 404 aa12.88□□□□□ -0.35
CCNE1-204ENST00000574121 MZT2AQ6P582 158 aa12.88□□□□□ -0.35
CCNE1-204ENST00000574121 OR10A7Q8NGE5 316 aa12.88□□□□□ -0.35
CCNE1-204ENST00000574121 OR13A1Q8NGR1 328 aa12.88□□□□□ -0.35
CCNE1-204ENST00000574121 OR5H6Q8NGV6 325 aa12.88□□□□□ -0.35
CCNE1-204ENST00000574121 TNFRSF14Q92956 283 aa12.88□□□□□ -0.35
CCNE1-204ENST00000574121 C12orf4Q9NQ89 552 aa12.88□□□□□ -0.35
CCNE1-204ENST00000574121 MBNL3Q9NUK0 354 aaKnown RBP12.88□□□□□ -0.35
CCNE1-204ENST00000574121 CCDC59Q9P031 241 aaKnown RBP12.88□□□□□ -0.35
CCNE1-204ENST00000574121 RSL24D1Q9UHA3 163 aaKnown RBP12.88□□□□□ -0.35
CCNE1-204ENST00000574121 NUP50Q9UKX7 468 aa12.88□□□□□ -0.35
CCNE1-204ENST00000574121 TRAPPC2LQ9UL33 140 aa12.88□□□□□ -0.35
CCNE1-204ENST00000574121 MTORP42345 2549 aa12.87□□□□□ -0.35
CCNE1-204ENST00000574121 TRBV6-6A0A0A6YYG2 114 aa12.87□□□□□ -0.35
CCNE1-204ENST00000574121 CENPVL3A0A0U1RRI6 287 aa12.87□□□□□ -0.35
CCNE1-204ENST00000574121 CCDC160A6NGH7 325 aa12.87□□□□□ -0.35
CCNE1-204ENST00000574121 MFNGO00587 321 aa12.87□□□□□ -0.35
CCNE1-204ENST00000574121 TMEM30BQ3MIR4 351 aa12.87□□□□□ -0.35
CCNE1-204ENST00000574121 OR52W1Q6IF63 320 aa12.87□□□□□ -0.35
CCNE1-204ENST00000574121 IL17RELQ6ZVW7 336 aa12.87□□□□□ -0.35
CCNE1-204ENST00000574121 MOB1BQ7L9L4 216 aa12.87□□□□□ -0.35
CCNE1-204ENST00000574121 SAMD12Q8N8I0 201 aa12.87□□□□□ -0.35
CCNE1-204ENST00000574121 DYNC2LI1Q8TCX1 351 aa12.87□□□□□ -0.35
CCNE1-204ENST00000574121 DYRK2Q92630 601 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms