RNA–Protein interactions for RNA: ENST00000574022.1

CHD3-217, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 103 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-217ENST00000574022 AHDC1Q5TGY3 1603 aaPredicted RBP1.4□□□□□ -2.18
CHD3-217ENST00000574022 CHD2O14647 1828 aaKnown RBP1.4□□□□□ -2.18
CHD3-217ENST00000574022 LRP4O75096 1905 aa1.4□□□□□ -2.18
CHD3-217ENST00000574022 A0A096LNJ9 63 aa1.4□□□□□ -2.19
CHD3-217ENST00000574022 KRTAP4-8A0A0G2JLE6 195 aa1.4□□□□□ -2.19
CHD3-217ENST00000574022 CENPVL3A0A0U1RRI6 287 aa1.4□□□□□ -2.19
CHD3-217ENST00000574022 TEX50A0A1B0GTY4 177 aa1.4□□□□□ -2.19
CHD3-217ENST00000574022 TMEM223A0PJW6 202 aa1.4□□□□□ -2.19
CHD3-217ENST00000574022 D6RAR5 112 aa1.4□□□□□ -2.19
CHD3-217ENST00000574022 MFNGO00587 321 aa1.4□□□□□ -2.19
CHD3-217ENST00000574022 COPEO14579 308 aa1.4□□□□□ -2.19
CHD3-217ENST00000574022 ZNF861PO60384 105 aa1.4□□□□□ -2.19
CHD3-217ENST00000574022 KCNK2O95069 426 aa1.4□□□□□ -2.19
CHD3-217ENST00000574022 HLA-DRAP01903 254 aa1.4□□□□□ -2.19
CHD3-217ENST00000574022 HLA-DQB1P01920 261 aa1.4□□□□□ -2.19
CHD3-217ENST00000574022 HBZP02008 142 aa1.4□□□□□ -2.19
CHD3-217ENST00000574022 CRYBA1P05813 215 aa1.4□□□□□ -2.19
CHD3-217ENST00000574022 ZNF806P0C7X5 589 aa1.4□□□□□ -2.19
CHD3-217ENST00000574022 GTF2F2P13984 249 aa1.4□□□□□ -2.19
CHD3-217ENST00000574022 ZNF823P16415 610 aa1.4□□□□□ -2.19
CHD3-217ENST00000574022 ZNF19P17023 458 aa1.4□□□□□ -2.19
CHD3-217ENST00000574022 IL1RNP18510 177 aa1.4□□□□□ -2.19
CHD3-217ENST00000574022 CXCL2P19875 107 aa1.4□□□□□ -2.19
CHD3-217ENST00000574022 CXCL3P19876 107 aa1.4□□□□□ -2.19
CHD3-217ENST00000574022 CCR7P32248 378 aa1.4□□□□□ -2.19
CHD3-217ENST00000574022 PMELP40967 661 aa1.4□□□□□ -2.19
CHD3-217ENST00000574022 OPRK1P41145 380 aa1.4□□□□□ -2.19
CHD3-217ENST00000574022 CAPZBP47756 277 aa1.4□□□□□ -2.19
CHD3-217ENST00000574022 CXCL12P48061 93 aa1.4□□□□□ -2.19
CHD3-217ENST00000574022 SULT1A1P50225 295 aa1.4□□□□□ -2.19
CHD3-217ENST00000574022 NUDT2P50583 147 aa1.4□□□□□ -2.19
CHD3-217ENST00000574022 CMC4P56277 68 aaPredicted RBP1.4□□□□□ -2.19
CHD3-217ENST00000574022 MP68P56378 58 aa1.4□□□□□ -2.19
CHD3-217ENST00000574022 H2BFSP57053 126 aa1.4□□□□□ -2.19
CHD3-217ENST00000574022 OR4D2P58180 307 aa1.4□□□□□ -2.19
CHD3-217ENST00000574022 RAB2AP61019 212 aa1.4□□□□□ -2.19
CHD3-217ENST00000574022 CXCR4P61073 352 aa1.4□□□□□ -2.19
CHD3-217ENST00000574022 DAD1P61803 113 aa1.4□□□□□ -2.19
CHD3-217ENST00000574022 ARF6P62330 175 aa1.4□□□□□ -2.19
CHD3-217ENST00000574022 RANP62826 216 aaKnown RBP1.4□□□□□ -2.19
CHD3-217ENST00000574022 ATP5G2Q06055 141 aa1.4□□□□□ -2.19
CHD3-217ENST00000574022 TSPAN31Q12999 210 aa1.4□□□□□ -2.19
CHD3-217ENST00000574022 OR2F1Q13607 317 aa1.4□□□□□ -2.19
CHD3-217ENST00000574022 RSU1Q15404 277 aa1.4□□□□□ -2.19
CHD3-217ENST00000574022 SPA17Q15506 151 aa1.4□□□□□ -2.19
CHD3-217ENST00000574022 ZNF239Q16600 458 aaKnown RBP1.4□□□□□ -2.19
CHD3-217ENST00000574022 DEFB116Q30KQ4 102 aa1.4□□□□□ -2.19
CHD3-217ENST00000574022 LINC00303Q3SY05 128 aa1.4□□□□□ -2.19
CHD3-217ENST00000574022 LUZP6Q538Z0 58 aa1.4□□□□□ -2.19
CHD3-217ENST00000574022 CENPWQ5EE01 88 aa1.4□□□□□ -2.19
CHD3-217ENST00000574022 C1orf195Q5TG92 126 aa1.4□□□□□ -2.19
CHD3-217ENST00000574022 SPATA31B1PQ5VZV4 182 aa1.4□□□□□ -2.19
CHD3-217ENST00000574022 ZFP1Q6P2D0 407 aa1.4□□□□□ -2.19
CHD3-217ENST00000574022 MORN3Q6PF18 240 aaPredicted RBP1.4□□□□□ -2.19
CHD3-217ENST00000574022 GSG1LQ6UXU4 331 aa1.4□□□□□ -2.19
CHD3-217ENST00000574022 CCDC121Q6ZUS5 278 aa1.4□□□□□ -2.19
CHD3-217ENST00000574022 FAM19A3Q7Z5A8 133 aa1.4□□□□□ -2.19
CHD3-217ENST00000574022 VN1R4Q7Z5H5 301 aa1.4□□□□□ -2.19
CHD3-217ENST00000574022 WDR86Q86TI4 376 aa1.4□□□□□ -2.19
CHD3-217ENST00000574022 NAA40Q86UY6 237 aa1.4□□□□□ -2.19
CHD3-217ENST00000574022 GID4Q8IVV7 300 aa1.4□□□□□ -2.19
CHD3-217ENST00000574022 RNF175Q8N4F7 328 aa1.4□□□□□ -2.19
CHD3-217ENST00000574022 SLC35G3Q8N808 338 aa1.4□□□□□ -2.19
CHD3-217ENST00000574022 ZNF555Q8NEP9 628 aa1.4□□□□□ -2.19
CHD3-217ENST00000574022 OR2M3Q8NG83 312 aa1.4□□□□□ -2.19
CHD3-217ENST00000574022 OR10G2Q8NGC3 310 aa1.4□□□□□ -2.19
CHD3-217ENST00000574022 OR11L1Q8NGX0 322 aa1.4□□□□□ -2.19
CHD3-217ENST00000574022 OR10D3Q8NH80 312 aa1.4□□□□□ -2.19
CHD3-217ENST00000574022 OR5K1Q8NHB7 308 aa1.4□□□□□ -2.19
CHD3-217ENST00000574022 CIRBP-AS1Q8TBR5 109 aa1.4□□□□□ -2.19
CHD3-217ENST00000574022 PHOSPHO2Q8TCD6 241 aa1.4□□□□□ -2.19
CHD3-217ENST00000574022 TNFAIP8L1Q8WVP5 186 aa1.4□□□□□ -2.19
CHD3-217ENST00000574022 ASB17Q8WXJ9 295 aa1.4□□□□□ -2.19
CHD3-217ENST00000574022 DGCR14Q96DF8 476 aaKnown RBP1.4□□□□□ -2.19
CHD3-217ENST00000574022 RBMXL1Q96E39 390 aaKnown RBP1.4□□□□□ -2.19
CHD3-217ENST00000574022 ZNF799Q96GE5 643 aa1.4□□□□□ -2.19
CHD3-217ENST00000574022 PRAP1Q96NZ9 151 aa1.4□□□□□ -2.19
CHD3-217ENST00000574022 SELENOSQ9BQE4 189 aa1.4□□□□□ -2.19
CHD3-217ENST00000574022 NDFIP1Q9BT67 221 aa1.4□□□□□ -2.19
CHD3-217ENST00000574022 THTPAQ9BU02 230 aa1.4□□□□□ -2.19
CHD3-217ENST00000574022 CHCHD7Q9BUK0 85 aa1.4□□□□□ -2.19
CHD3-217ENST00000574022 PLA2G2FQ9BZM2 168 aa1.4□□□□□ -2.19
CHD3-217ENST00000574022 OR51I1Q9H343 314 aa1.4□□□□□ -2.19
CHD3-217ENST00000574022 PDFQ9HBH1 243 aa1.4□□□□□ -2.19
CHD3-217ENST00000574022 UBQLN4Q9NRR5 601 aa1.4□□□□□ -2.19
CHD3-217ENST00000574022 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.4□□□□□ -2.19
CHD3-217ENST00000574022 ZNF355PQ9NSJ1 428 aa1.4□□□□□ -2.19
CHD3-217ENST00000574022 C21orf62Q9NYP8 219 aa1.4□□□□□ -2.19
CHD3-217ENST00000574022 TMEM216Q9P0N5 145 aa1.4□□□□□ -2.19
CHD3-217ENST00000574022 RPS6KB2Q9UBS0 482 aa1.4□□□□□ -2.19
CHD3-217ENST00000574022 OPN4Q9UHM6 478 aa1.4□□□□□ -2.19
CHD3-217ENST00000574022 DKKL1Q9UK85 242 aa1.4□□□□□ -2.19
CHD3-217ENST00000574022 ZNF337Q9Y3M9 751 aa1.4□□□□□ -2.19
CHD3-217ENST00000574022 LSM5Q9Y4Y9 91 aaKnown RBP1.4□□□□□ -2.19
CHD3-217ENST00000574022 KIF25-AS1Q9Y6Z4 181 aa1.4□□□□□ -2.19
CHD3-217ENST00000574022 MEGF6O75095 1541 aa1.4□□□□□ -2.19
CHD3-217ENST00000574022 ARAP3Q8WWN8 1544 aa1.4□□□□□ -2.19
CHD3-217ENST00000574022 ATRNO75882 1429 aa1.4□□□□□ -2.19
CHD3-217ENST00000574022 ZFYVE9O95405 1425 aa1.4□□□□□ -2.19
CHD3-217ENST00000574022 FLT4P35916 1363 aa1.39□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms