RNA–Protein interactions for RNA: ENST00000573550.5

CDC27-215, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-215ENST00000573550 TM2D1Q9BX74 207 aa4.02□□□□□ -1.77
CDC27-215ENST00000573550 ZNF471Q9BX82 626 aaPredicted RBP4.02□□□□□ -1.77
CDC27-215ENST00000573550 TMEM59Q9BXS4 323 aa4.02□□□□□ -1.77
CDC27-215ENST00000573550 SEC11CQ9BY50 192 aa4.02□□□□□ -1.77
CDC27-215ENST00000573550 NKX6-2Q9C056 277 aaPredicted RBP4.02□□□□□ -1.77
CDC27-215ENST00000573550 CHST6Q9GZX3 395 aa4.02□□□□□ -1.77
CDC27-215ENST00000573550 PBOV1Q9GZY1 135 aa4.02□□□□□ -1.77
CDC27-215ENST00000573550 LPAR5Q9H1C0 372 aa4.02□□□□□ -1.77
CDC27-215ENST00000573550 WNT5BQ9H1J7 359 aa4.02□□□□□ -1.77
CDC27-215ENST00000573550 SLC26A1Q9H2B4 701 aa4.02□□□□□ -1.77
CDC27-215ENST00000573550 TAS2R3Q9NYW6 316 aa4.02□□□□□ -1.77
CDC27-215ENST00000573550 MBD2Q9UBB5 411 aa4.02□□□□□ -1.77
CDC27-215ENST00000573550 CTSFQ9UBX1 484 aa4.02□□□□□ -1.77
CDC27-215ENST00000573550 ZNF391Q9UJN7 358 aa4.02□□□□□ -1.77
CDC27-215ENST00000573550 HDGFL3Q9Y3E1 203 aa4.02□□□□□ -1.77
CDC27-215ENST00000573550 ZNF175Q9Y473 711 aa4.02□□□□□ -1.77
CDC27-215ENST00000573550 WIF1Q9Y5W5 379 aa4.02□□□□□ -1.77
CDC27-215ENST00000573550 FLVCR1Q9Y5Y0 555 aa4.02□□□□□ -1.77
CDC27-215ENST00000573550 RP1P56715 2156 aa4.02□□□□□ -1.77
CDC27-215ENST00000573550 SPTBP11277 2137 aa4.01□□□□□ -1.77
CDC27-215ENST00000573550 TDRD6O60522 2096 aaKnown RBP4.01□□□□□ -1.77
CDC27-215ENST00000573550 TMEM218A2RU14 115 aa4.01□□□□□ -1.77
CDC27-215ENST00000573550 KRTAP16-1A8MUX0 517 aa4.01□□□□□ -1.77
CDC27-215ENST00000573550 DNASE2O00115 360 aaPredicted RBP4.01□□□□□ -1.77
CDC27-215ENST00000573550 TRAF3IP2O43734 574 aaPredicted RBP4.01□□□□□ -1.77
CDC27-215ENST00000573550 ZNF354AO60765 605 aaPredicted RBP4.01□□□□□ -1.77
CDC27-215ENST00000573550 MTRF1O75570 445 aaKnown RBP4.01□□□□□ -1.77
CDC27-215ENST00000573550 VAMP5O95183 116 aa4.01□□□□□ -1.77
CDC27-215ENST00000573550 SNAPINO95295 136 aa4.01□□□□□ -1.77
CDC27-215ENST00000573550 SFT2D2O95562 160 aa4.01□□□□□ -1.77
CDC27-215ENST00000573550 APOC3P02656 99 aa4.01□□□□□ -1.77
CDC27-215ENST00000573550 CD79AP11912 226 aa4.01□□□□□ -1.77
CDC27-215ENST00000573550 CPT2P23786 658 aa4.01□□□□□ -1.77
CDC27-215ENST00000573550 OTX1P32242 354 aaPredicted RBP4.01□□□□□ -1.77
CDC27-215ENST00000573550 PMELP40967 661 aa4.01□□□□□ -1.77
CDC27-215ENST00000573550 RPS27P42677 84 aaKnown RBP4.01□□□□□ -1.77
CDC27-215ENST00000573550 P2RY4P51582 365 aa4.01□□□□□ -1.77
CDC27-215ENST00000573550 EFNA3P52797 238 aa4.01□□□□□ -1.77
CDC27-215ENST00000573550 ATP1B3P54709 279 aa4.01□□□□□ -1.77
CDC27-215ENST00000573550 EMP2P54851 167 aa4.01□□□□□ -1.77
CDC27-215ENST00000573550 HIST1H3AP68431 136 aa4.01□□□□□ -1.77
CDC27-215ENST00000573550 S100A12P80511 92 aa4.01□□□□□ -1.77
CDC27-215ENST00000573550 OC90Q02509 493 aaPredicted RBP4.01□□□□□ -1.77
CDC27-215ENST00000573550 ACY1Q03154 408 aa4.01□□□□□ -1.77
CDC27-215ENST00000573550 SCRN3Q0VDG4 424 aa4.01□□□□□ -1.77
CDC27-215ENST00000573550 PJVKQ0ZLH3 352 aa4.01□□□□□ -1.77
CDC27-215ENST00000573550 FOXF1Q12946 379 aa4.01□□□□□ -1.77
CDC27-215ENST00000573550 SRSF5Q13243 272 aaKnown RBP4.01□□□□□ -1.77
CDC27-215ENST00000573550 IL15RAQ13261 267 aa4.01□□□□□ -1.77
CDC27-215ENST00000573550 C1orf61Q13536 156 aa4.01□□□□□ -1.77
CDC27-215ENST00000573550 SHHQ15465 462 aa4.01□□□□□ -1.77
CDC27-215ENST00000573550 OR7A5Q15622 319 aa4.01□□□□□ -1.77
CDC27-215ENST00000573550 MICBQ29980 383 aa4.01□□□□□ -1.77
CDC27-215ENST00000573550 HFEQ30201 348 aa4.01□□□□□ -1.77
CDC27-215ENST00000573550 MOGAT2Q3SYC2 334 aa4.01□□□□□ -1.77
CDC27-215ENST00000573550 SCGB2B2Q4G0G5 96 aa4.01□□□□□ -1.77
CDC27-215ENST00000573550 C10orf128Q5T292 105 aa4.01□□□□□ -1.77
CDC27-215ENST00000573550 HIST2H3PS2Q5TEC6 136 aa4.01□□□□□ -1.77
CDC27-215ENST00000573550 SLC25A47Q6Q0C1 308 aa4.01□□□□□ -1.77
CDC27-215ENST00000573550 HIST2H3AQ71DI3 136 aa4.01□□□□□ -1.77
CDC27-215ENST00000573550 COX15Q7KZN9 410 aa4.01□□□□□ -1.77
CDC27-215ENST00000573550 PRR22Q8IZ63 422 aa4.01□□□□□ -1.77
CDC27-215ENST00000573550 OR5AS1Q8N127 324 aa4.01□□□□□ -1.77
CDC27-215ENST00000573550 GTPBP8Q8N3Z3 284 aaPredicted RBP4.01□□□□□ -1.77
CDC27-215ENST00000573550 FADS6Q8N9I5 356 aa4.01□□□□□ -1.77
CDC27-215ENST00000573550 ACBD4Q8NC06 268 aa4.01□□□□□ -1.77
CDC27-215ENST00000573550 OR5H2Q8NGV7 314 aa4.01□□□□□ -1.77
CDC27-215ENST00000573550 OR8S1Q8NH09 359 aa4.01□□□□□ -1.77
CDC27-215ENST00000573550 OR4K15Q8NH41 348 aa4.01□□□□□ -1.77
CDC27-215ENST00000573550 SLC22A8Q8TCC7 542 aa4.01□□□□□ -1.77
CDC27-215ENST00000573550 PCNPQ8WW12 178 aaKnown RBP4.01□□□□□ -1.77
CDC27-215ENST00000573550 C11orf40Q8WZ69 217 aa4.01□□□□□ -1.77
CDC27-215ENST00000573550 DYRK2Q92630 601 aa4.01□□□□□ -1.77
CDC27-215ENST00000573550 EMG1Q92979 244 aaKnown RBP4.01□□□□□ -1.77
CDC27-215ENST00000573550 SPSB1Q96BD6 273 aa4.01□□□□□ -1.77
CDC27-215ENST00000573550 SLC25A36Q96CQ1 311 aa4.01□□□□□ -1.77
CDC27-215ENST00000573550 ADAT3Q96EY9 351 aaPredicted RBP4.01□□□□□ -1.77
CDC27-215ENST00000573550 POM121L2Q96KW2 1035 aa4.01□□□□□ -1.77
CDC27-215ENST00000573550 C2orf50Q96LR7 162 aa4.01□□□□□ -1.77
CDC27-215ENST00000573550 OXGR1Q96P68 337 aa4.01□□□□□ -1.77
CDC27-215ENST00000573550 TSNAXQ99598 290 aaKnown RBP4.01□□□□□ -1.77
CDC27-215ENST00000573550 KLHDC3Q9BQ90 382 aa4.01□□□□□ -1.77
CDC27-215ENST00000573550 OR11A1Q9GZK7 315 aa4.01□□□□□ -1.77
CDC27-215ENST00000573550 CHST5Q9GZS9 411 aa4.01□□□□□ -1.77
CDC27-215ENST00000573550 WDR54Q9H977 334 aa4.01□□□□□ -1.77
CDC27-215ENST00000573550 RNF122Q9H9V4 155 aa4.01□□□□□ -1.77
CDC27-215ENST00000573550 FGF21Q9NSA1 209 aa4.01□□□□□ -1.77
CDC27-215ENST00000573550 SLC39A1Q9NY26 324 aa4.01□□□□□ -1.77
CDC27-215ENST00000573550 C19orf25Q9UFG5 118 aaPredicted RBP4.01□□□□□ -1.77
CDC27-215ENST00000573550 NXT1Q9UKK6 140 aaKnown RBP4.01□□□□□ -1.77
CDC27-215ENST00000573550 GPR132Q9UNW8 380 aa4.01□□□□□ -1.77
CDC27-215ENST00000573550 LHFPL6Q9Y693 200 aa4.01□□□□□ -1.77
CDC27-215ENST00000573550 LAMA2P24043 3122 aaKnown RBP4.01□□□□□ -1.77
CDC27-215ENST00000573550 BRWD1Q9NSI6 2320 aa4□□□□□ -1.77
CDC27-215ENST00000573550 TNRC6BQ9UPQ9 1833 aaKnown RBP4□□□□□ -1.77
CDC27-215ENST00000573550 PIGBOS1A0A0B4J2F0 54 aa4□□□□□ -1.77
CDC27-215ENST00000573550 MEIS3P1A6NDR6 274 aa4□□□□□ -1.77
CDC27-215ENST00000573550 MSGN1A6NI15 193 aa4□□□□□ -1.77
CDC27-215ENST00000573550 ATP6V1G2-DDX39BF2Z307 99 aa4□□□□□ -1.77
CDC27-215ENST00000573550 EIF1BO60739 113 aaKnown RBP4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms