RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 IDI2-AS1Q9NZ38 188 aa14.38□□□□□ -0.11
CHD3-214ENST00000572579 A0A1W2PP11 408 aa14.37□□□□□ -0.11
CHD3-214ENST00000572579 A0A1W2PPE3 182 aa14.37□□□□□ -0.11
CHD3-214ENST00000572579 XPNPEP2O43895 674 aa14.37□□□□□ -0.11
CHD3-214ENST00000572579 HTR3BO95264 441 aa14.37□□□□□ -0.11
CHD3-214ENST00000572579 IGFBP3P17936 291 aaPredicted RBP14.37□□□□□ -0.11
CHD3-214ENST00000572579 CCDC58Q4VC31 144 aa14.37□□□□□ -0.11
CHD3-214ENST00000572579 FOXB2Q5VYV0 432 aa14.37□□□□□ -0.11
CHD3-214ENST00000572579 LAIR2Q6ISS4 152 aa14.37□□□□□ -0.11
CHD3-214ENST00000572579 THNSL2Q86YJ6 484 aa14.37□□□□□ -0.11
CHD3-214ENST00000572579 ZNF565Q8N9K5 539 aa14.37□□□□□ -0.11
CHD3-214ENST00000572579 CAPSLQ8WWF8 208 aa14.37□□□□□ -0.11
CHD3-214ENST00000572579 TMEM106AQ96A25 262 aa14.37□□□□□ -0.11
CHD3-214ENST00000572579 GPER1Q99527 375 aa14.37□□□□□ -0.11
CHD3-214ENST00000572579 DPCDQ9BVM2 203 aaPredicted RBP14.37□□□□□ -0.11
CHD3-214ENST00000572579 BABAM2Q9NXR7 383 aa14.37□□□□□ -0.11
CHD3-214ENST00000572579 TRBV5-5A0A0J9YX44 114 aa14.36□□□□□ -0.11
CHD3-214ENST00000572579 TCRBV4S1A1TA0A5B7 111 aa14.36□□□□□ -0.11
CHD3-214ENST00000572579 OOSP1A8MZH6 123 aa14.36□□□□□ -0.11
CHD3-214ENST00000572579 C15orf65H3BRN8 121 aa14.36□□□□□ -0.11
CHD3-214ENST00000572579 GEMIN2O14893 280 aaKnown RBP14.36□□□□□ -0.11
CHD3-214ENST00000572579 BAG2O95816 211 aa14.36□□□□□ -0.11
CHD3-214ENST00000572579 SNRNP70P08621 437 aaKnown RBP14.36□□□□□ -0.11
CHD3-214ENST00000572579 DCKP27707 260 aa14.36□□□□□ -0.11
CHD3-214ENST00000572579 CEACAM3P40198 252 aa14.36□□□□□ -0.11
CHD3-214ENST00000572579 RSU1Q15404 277 aa14.36□□□□□ -0.11
CHD3-214ENST00000572579 OR56B4Q8NH76 319 aa14.36□□□□□ -0.11
CHD3-214ENST00000572579 CREB3L1Q96BA8 519 aa14.36□□□□□ -0.11
CHD3-214ENST00000572579 MYCBPQ99417 103 aaPredicted RBP14.36□□□□□ -0.11
CHD3-214ENST00000572579 BARHL1Q9BZE3 327 aa14.36□□□□□ -0.11
CHD3-214ENST00000572579 FAM192AQ9GZU8 254 aa14.36□□□□□ -0.11
CHD3-214ENST00000572579 IFT22Q9H7X7 185 aa14.36□□□□□ -0.11
CHD3-214ENST00000572579 TMEM138Q9NPI0 162 aa14.36□□□□□ -0.11
CHD3-214ENST00000572579 NECAP2Q9NVZ3 263 aa14.36□□□□□ -0.11
CHD3-214ENST00000572579 SMPD3Q9NY59 655 aaPredicted RBP14.36□□□□□ -0.11
CHD3-214ENST00000572579 IL36GQ9NZH8 169 aa14.36□□□□□ -0.11
CHD3-214ENST00000572579 ING4Q9UNL4 249 aa14.36□□□□□ -0.11
CHD3-214ENST00000572579 ST3GAL6Q9Y274 331 aa14.36□□□□□ -0.11
CHD3-214ENST00000572579 TRAV8-7A0A075B6U6 113 aa14.35□□□□□ -0.11
CHD3-214ENST00000572579 LINC01548A6NM66 108 aa14.35□□□□□ -0.11
CHD3-214ENST00000572579 C21orf33P30042 268 aaPredicted RBP14.35□□□□□ -0.11
CHD3-214ENST00000572579 GNG10P50151 68 aa14.35□□□□□ -0.11
CHD3-214ENST00000572579 NHLRC3Q5JS37 347 aa14.35□□□□□ -0.11
CHD3-214ENST00000572579 DMKNQ6E0U4 476 aaPredicted RBP14.35□□□□□ -0.11
CHD3-214ENST00000572579 ZFP41Q8N8Y5 198 aa14.35□□□□□ -0.11
CHD3-214ENST00000572579 UBALD1Q8TB05 177 aa14.35□□□□□ -0.11
CHD3-214ENST00000572579 GHSRQ92847 366 aa14.35□□□□□ -0.11
CHD3-214ENST00000572579 ZNF281Q9Y2X9 895 aa14.35□□□□□ -0.11
CHD3-214ENST00000572579 MAGEB3O15480 346 aa14.34□□□□□ -0.11
CHD3-214ENST00000572579 FAM106CPP0CH98 169 aa14.34□□□□□ -0.11
CHD3-214ENST00000572579 ZNF93P35789 620 aaPredicted RBP14.34□□□□□ -0.11
CHD3-214ENST00000572579 RBM11P57052 281 aaKnown RBP14.34□□□□□ -0.11
CHD3-214ENST00000572579 KRTAP10-11P60412 298 aa14.34□□□□□ -0.11
CHD3-214ENST00000572579 HNF4GQ14541 408 aa14.34□□□□□ -0.11
CHD3-214ENST00000572579 DDI2Q5TDH0 399 aa14.34□□□□□ -0.11
CHD3-214ENST00000572579 CCDC144NLQ6NUI1 221 aa14.34□□□□□ -0.11
CHD3-214ENST00000572579 C18orf65Q6ZTR6 163 aa14.34□□□□□ -0.11
CHD3-214ENST00000572579 ZNF329Q86UD4 541 aa14.34□□□□□ -0.11
CHD3-214ENST00000572579 C10orf67Q8IYJ2 551 aa14.34□□□□□ -0.11
CHD3-214ENST00000572579 OSR2Q8N2R0 312 aa14.34□□□□□ -0.11
CHD3-214ENST00000572579 C5orf56Q8N8D9 126 aa14.34□□□□□ -0.11
CHD3-214ENST00000572579 OR52N1Q8NH53 320 aa14.34□□□□□ -0.11
CHD3-214ENST00000572579 HAVCR2Q8TDQ0 301 aa14.34□□□□□ -0.11
CHD3-214ENST00000572579 SGCDQ92629 289 aa14.34□□□□□ -0.11
CHD3-214ENST00000572579 GGHQ92820 318 aa14.34□□□□□ -0.11
CHD3-214ENST00000572579 TOMM40LQ969M1 308 aa14.34□□□□□ -0.11
CHD3-214ENST00000572579 RPEQ96AT9 228 aa14.34□□□□□ -0.11
CHD3-214ENST00000572579 SMIM19Q96E16 107 aa14.34□□□□□ -0.11
CHD3-214ENST00000572579 AKR1E2Q96JD6 320 aa14.34□□□□□ -0.11
CHD3-214ENST00000572579 PGLYRP3Q96LB9 341 aa14.34□□□□□ -0.11
CHD3-214ENST00000572579 NOL4LQ96MY1 436 aaPredicted RBP14.34□□□□□ -0.11
CHD3-214ENST00000572579 METTL9Q9H1A3 318 aa14.34□□□□□ -0.11
CHD3-214ENST00000572579 DIMT1Q9UNQ2 313 aaKnown RBP14.34□□□□□ -0.11
CHD3-214ENST00000572579 TSSC4Q9Y5U2 329 aaPredicted RBP14.34□□□□□ -0.11
CHD3-214ENST00000572579 H3BUI4 141 aa14.33□□□□□ -0.12
CHD3-214ENST00000572579 GPX5O75715 221 aa14.33□□□□□ -0.12
CHD3-214ENST00000572579 BDKRB2P30411 391 aa14.33□□□□□ -0.12
CHD3-214ENST00000572579 MNDAP41218 407 aa14.33□□□□□ -0.12
CHD3-214ENST00000572579 LOXL3P58215 753 aa14.33□□□□□ -0.12
CHD3-214ENST00000572579 ADARB1P78563 741 aaKnown RBP14.33□□□□□ -0.12
CHD3-214ENST00000572579 LRRC36Q1X8D7 754 aa14.33□□□□□ -0.12
CHD3-214ENST00000572579 C9orf152Q5JTZ5 239 aa14.33□□□□□ -0.12
CHD3-214ENST00000572579 ETV3LQ6ZN32 361 aa14.33□□□□□ -0.12
CHD3-214ENST00000572579 REC114Q7Z4M0 266 aa14.33□□□□□ -0.12
CHD3-214ENST00000572579 LYPD6Q86Y78 171 aa14.33□□□□□ -0.12
CHD3-214ENST00000572579 MRAPQ8TCY5 172 aa14.33□□□□□ -0.12
CHD3-214ENST00000572579 RDH12Q96NR8 316 aa14.33□□□□□ -0.12
CHD3-214ENST00000572579 TRBV5-7A0A0A0MS05 114 aa14.32□□□□□ -0.12
CHD3-214ENST00000572579 A0A1W2PPK0 400 aa14.32□□□□□ -0.12
CHD3-214ENST00000572579 PIN1P1O15428 100 aa14.32□□□□□ -0.12
CHD3-214ENST00000572579 OR7C1O76099 320 aaPredicted RBP14.32□□□□□ -0.12
CHD3-214ENST00000572579 MT-ND4P03905 459 aa14.32□□□□□ -0.12
CHD3-214ENST00000572579 SERPINA2P20848 420 aa14.32□□□□□ -0.12
CHD3-214ENST00000572579 KCNJ3P48549 501 aa14.32□□□□□ -0.12
CHD3-214ENST00000572579 MADCAM1Q13477 382 aa14.32□□□□□ -0.12
CHD3-214ENST00000572579 TMPRSS11AQ6ZMR5 421 aa14.32□□□□□ -0.12
CHD3-214ENST00000572579 ZNF555Q8NEP9 628 aa14.32□□□□□ -0.12
CHD3-214ENST00000572579 OR10A7Q8NGE5 316 aa14.32□□□□□ -0.12
CHD3-214ENST00000572579 CCDC107Q8WV48 283 aa14.32□□□□□ -0.12
CHD3-214ENST00000572579 ZNF184Q99676 751 aaPredicted RBP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms