RNA–Protein interactions for RNA: ENST00000572253.5

CCDC40-207, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 3,962 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-207ENST00000572253 OR5D13Q8NGL4 314 aa9.26□□□□□ -0.93
CCDC40-207ENST00000572253 OR13D1Q8NGV5 346 aa9.26□□□□□ -0.93
CCDC40-207ENST00000572253 Q8WTZ3 238 aa9.26□□□□□ -0.93
CCDC40-207ENST00000572253 RIMS4Q9H426 269 aaPredicted RBP9.26□□□□□ -0.93
CCDC40-207ENST00000572253 RFNGQ9Y644 331 aa9.26□□□□□ -0.93
CCDC40-207ENST00000572253 ELOA3CA0A087WX78 387 aaPredicted RBP9.26□□□□□ -0.93
CCDC40-207ENST00000572253 TRAPPC6AO75865 159 aa9.26□□□□□ -0.93
CCDC40-207ENST00000572253 CNOT4O95628 575 aaKnown RBP9.26□□□□□ -0.93
CCDC40-207ENST00000572253 FGF5P12034 268 aa9.26□□□□□ -0.93
CCDC40-207ENST00000572253 COX6A1P12074 109 aa9.26□□□□□ -0.93
CCDC40-207ENST00000572253 GLIPR1P48060 266 aa9.26□□□□□ -0.93
CCDC40-207ENST00000572253 ELOBQ15370 118 aa9.26□□□□□ -0.93
CCDC40-207ENST00000572253 KRTAP27-1Q3LI81 207 aa9.26□□□□□ -0.93
CCDC40-207ENST00000572253 OR2V1Q8NHB1 315 aa9.26□□□□□ -0.93
CCDC40-207ENST00000572253 CLDND2Q8NHS1 167 aa9.26□□□□□ -0.93
CCDC40-207ENST00000572253 GPR35Q9HC97 309 aa9.26□□□□□ -0.93
CCDC40-207ENST00000572253 TINAGQ9UJW2 476 aa9.26□□□□□ -0.93
CCDC40-207ENST00000572253 CLEC18AA5D8T8 446 aa9.25□□□□□ -0.93
CCDC40-207ENST00000572253 SLC22A20A6NK97 555 aa9.25□□□□□ -0.93
CCDC40-207ENST00000572253 H0Y980 276 aa9.25□□□□□ -0.93
CCDC40-207ENST00000572253 NXPH3O95157 252 aa9.25□□□□□ -0.93
CCDC40-207ENST00000572253 SLC34A2O95436 690 aa9.25□□□□□ -0.93
CCDC40-207ENST00000572253 BCL3P20749 454 aa9.25□□□□□ -0.93
CCDC40-207ENST00000572253 NPBWR2P48146 333 aa9.25□□□□□ -0.93
CCDC40-207ENST00000572253 MLF1P58340 268 aa9.25□□□□□ -0.93
CCDC40-207ENST00000572253 RAB11AP62491 216 aa9.25□□□□□ -0.93
CCDC40-207ENST00000572253 PNRC1Q12796 327 aaPredicted RBP9.25□□□□□ -0.93
CCDC40-207ENST00000572253 MPV17LQ2QL34 196 aa9.25□□□□□ -0.93
CCDC40-207ENST00000572253 NMSQ5H8A3 153 aa9.25□□□□□ -0.93
CCDC40-207ENST00000572253 TCEAL6Q6IPX3 200 aa9.25□□□□□ -0.93
CCDC40-207ENST00000572253 MRPL21Q7Z2W9 205 aaKnown RBP9.25□□□□□ -0.93
CCDC40-207ENST00000572253 CLEC18CQ8NCF0 446 aa9.25□□□□□ -0.93
CCDC40-207ENST00000572253 RAB40CQ96S21 281 aa9.25□□□□□ -0.93
CCDC40-207ENST00000572253 PROK2Q9HC23 129 aa9.25□□□□□ -0.93
CCDC40-207ENST00000572253 GFOD1Q9NXC2 390 aa9.25□□□□□ -0.93
CCDC40-207ENST00000572253 TREM2Q9NZC2 230 aa9.25□□□□□ -0.93
CCDC40-207ENST00000572253 GNG13Q9P2W3 67 aa9.25□□□□□ -0.93
CCDC40-207ENST00000572253 RNF150Q9ULK6 438 aa9.25□□□□□ -0.93
CCDC40-207ENST00000572253 ZNF729A6NN14 1252 aaPredicted RBP9.25□□□□□ -0.93
CCDC40-207ENST00000572253 SCTP09683 121 aa9.25□□□□□ -0.93
CCDC40-207ENST00000572253 FGF12P61328 243 aa9.25□□□□□ -0.93
CCDC40-207ENST00000572253 DEFA6Q01524 100 aa9.25□□□□□ -0.93
CCDC40-207ENST00000572253 SAXO1Q8IYX7 474 aa9.25□□□□□ -0.93
CCDC40-207ENST00000572253 OR56B2PQ8NGI1 322 aa9.25□□□□□ -0.93
CCDC40-207ENST00000572253 PRDM14Q9GZV8 571 aa9.25□□□□□ -0.93
CCDC40-207ENST00000572253 CCL28Q9NRJ3 127 aa9.25□□□□□ -0.93
CCDC40-207ENST00000572253 ADAMTS20P59510 1910 aa9.25□□□□□ -0.93
CCDC40-207ENST00000572253 SDK2Q58EX2 2172 aa9.25□□□□□ -0.93
CCDC40-207ENST00000572253 IFNA1P01562 189 aa9.25□□□□□ -0.93
CCDC40-207ENST00000572253 CCNOP22674 350 aa9.25□□□□□ -0.93
CCDC40-207ENST00000572253 CD200P41217 278 aa9.25□□□□□ -0.93
CCDC40-207ENST00000572253 HAAOP46952 286 aa9.25□□□□□ -0.93
CCDC40-207ENST00000572253 ZNF343Q6P1L6 599 aa9.25□□□□□ -0.93
CCDC40-207ENST00000572253 OR10G4Q8NGN3 311 aa9.25□□□□□ -0.93
CCDC40-207ENST00000572253 TRBV23-1A0A0A0MS06 115 aa9.24□□□□□ -0.93
CCDC40-207ENST00000572253 LOC102723971A0A1B0GUV8 181 aa9.24□□□□□ -0.93
CCDC40-207ENST00000572253 ZNF716A6NP11 495 aa9.24□□□□□ -0.93
CCDC40-207ENST00000572253 FOLR3P41439 243 aa9.24□□□□□ -0.93
CCDC40-207ENST00000572253 PRDX4Q13162 271 aa9.24□□□□□ -0.93
CCDC40-207ENST00000572253 H1FOOQ8IZA3 346 aaPredicted RBP9.24□□□□□ -0.93
CCDC40-207ENST00000572253 OR10D4PQ8NGN7 298 aa9.24□□□□□ -0.93
CCDC40-207ENST00000572253 C1QTNF5Q9BXJ0 243 aa9.24□□□□□ -0.93
CCDC40-207ENST00000572253 BCL2L14Q9BZR8 327 aa9.24□□□□□ -0.93
CCDC40-207ENST00000572253 LRFN1Q9P244 771 aa9.24□□□□□ -0.93
CCDC40-207ENST00000572253 HS3ST3B1Q9Y662 390 aa9.24□□□□□ -0.93
CCDC40-207ENST00000572253 KNTC1P50748 2209 aa9.24□□□□□ -0.93
CCDC40-207ENST00000572253 A0A1B0GU03 582 aa9.24□□□□□ -0.93
CCDC40-207ENST00000572253 CXCL12P48061 93 aa9.24□□□□□ -0.93
CCDC40-207ENST00000572253 LYSMD4Q5XG99 296 aa9.24□□□□□ -0.93
CCDC40-207ENST00000572253 ZNF787Q6DD87 383 aa9.24□□□□□ -0.93
CCDC40-207ENST00000572253 ZDHHC23Q8IYP9 409 aa9.24□□□□□ -0.93
CCDC40-207ENST00000572253 OR10D3Q8NH80 312 aa9.24□□□□□ -0.93
CCDC40-207ENST00000572253 SPSB4Q96A44 273 aa9.24□□□□□ -0.93
CCDC40-207ENST00000572253 S100PBPQ96BU1 408 aa9.24□□□□□ -0.93
CCDC40-207ENST00000572253 SIGLEC12Q96PQ1 595 aa9.24□□□□□ -0.93
CCDC40-207ENST00000572253 TGIF2-C20orf24A0A0A6YYL0 155 aa9.24□□□□□ -0.93
CCDC40-207ENST00000572253 TRAV1-1A0A0B4J248 108 aa9.24□□□□□ -0.93
CCDC40-207ENST00000572253 LRP5LA4QPB2 252 aa9.24□□□□□ -0.93
CCDC40-207ENST00000572253 CLDN34H7C241 214 aa9.24□□□□□ -0.93
CCDC40-207ENST00000572253 HSPB6O14558 160 aa9.24□□□□□ -0.93
CCDC40-207ENST00000572253 UMODP07911 640 aa9.24□□□□□ -0.93
CCDC40-207ENST00000572253 CXCL1P09341 107 aa9.24□□□□□ -0.93
CCDC40-207ENST00000572253 EDN3P14138 238 aa9.24□□□□□ -0.93
CCDC40-207ENST00000572253 COL19A1Q14993 1142 aa9.24□□□□□ -0.93
CCDC40-207ENST00000572253 AGBL5Q8NDL9 886 aa9.24□□□□□ -0.93
CCDC40-207ENST00000572253 EDARADDQ8WWZ3 215 aa9.24□□□□□ -0.93
CCDC40-207ENST00000572253 FAM210BQ96KR6 192 aa9.24□□□□□ -0.93
CCDC40-207ENST00000572253 ATP23Q9Y6H3 246 aa9.24□□□□□ -0.93
CCDC40-207ENST00000572253 ZFP92A6NM28 416 aa9.23□□□□□ -0.93
CCDC40-207ENST00000572253 TNFSF12O43508 249 aa9.23□□□□□ -0.93
CCDC40-207ENST00000572253 TUSC2O75896 110 aa9.23□□□□□ -0.93
CCDC40-207ENST00000572253 NAPSAO96009 420 aa9.23□□□□□ -0.93
CCDC40-207ENST00000572253 RD3LP0DJH9 198 aa9.23□□□□□ -0.93
CCDC40-207ENST00000572253 F2RP25116 425 aa9.23□□□□□ -0.93
CCDC40-207ENST00000572253 GPM6AP51674 278 aa9.23□□□□□ -0.93
CCDC40-207ENST00000572253 ABLIM2Q6H8Q1 611 aa9.23□□□□□ -0.93
CCDC40-207ENST00000572253 OR2T2Q6IF00 324 aa9.23□□□□□ -0.93
CCDC40-207ENST00000572253 PSMF1Q92530 271 aa9.23□□□□□ -0.93
CCDC40-207ENST00000572253 PLK3Q9H4B4 646 aa9.23□□□□□ -0.93
CCDC40-207ENST00000572253 SH2D2AQ9NP31 389 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms