RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 FAM27D1Q5T7N8 215 aa15.47■□□□□ 0.07
CCDC40-206ENST00000572083 ASPHD1Q5U4P2 390 aa15.47■□□□□ 0.07
CCDC40-206ENST00000572083 FAHD1Q6P587 224 aa15.47■□□□□ 0.07
CCDC40-206ENST00000572083 ADAMTSL5Q6ZMM2 481 aa15.47■□□□□ 0.07
CCDC40-206ENST00000572083 FAM220AQ7Z4H9 259 aa15.47■□□□□ 0.07
CCDC40-206ENST00000572083 IZUMO1Q8IYV9 350 aa15.47■□□□□ 0.07
CCDC40-206ENST00000572083 OR13C9Q8NGT0 318 aa15.47■□□□□ 0.07
CCDC40-206ENST00000572083 RBMXL1Q96E39 390 aaKnown RBP15.47■□□□□ 0.07
CCDC40-206ENST00000572083 CITED4Q96RK1 184 aa15.47■□□□□ 0.07
CCDC40-206ENST00000572083 ISYNA1Q9NPH2 558 aa15.47■□□□□ 0.07
CCDC40-206ENST00000572083 KRT84Q9NSB2 600 aa15.47■□□□□ 0.07
CCDC40-206ENST00000572083 TRAV39A0A0B4J263 110 aa15.46■□□□□ 0.07
CCDC40-206ENST00000572083 MPZL2O60487 215 aa15.46■□□□□ 0.07
CCDC40-206ENST00000572083 MITFO75030 526 aaPredicted RBP15.46■□□□□ 0.07
CCDC40-206ENST00000572083 OR2T7P0C7T2 308 aa15.46■□□□□ 0.07
CCDC40-206ENST00000572083 PSMB8P28062 276 aa15.46■□□□□ 0.07
CCDC40-206ENST00000572083 C12orf73Q69YU5 71 aa15.46■□□□□ 0.07
CCDC40-206ENST00000572083 OR2T10Q8NGZ9 312 aa15.46■□□□□ 0.07
CCDC40-206ENST00000572083 RNF166Q96A37 237 aaPredicted RBP15.46■□□□□ 0.07
CCDC40-206ENST00000572083 RNFT2Q96EX2 444 aa15.46■□□□□ 0.07
CCDC40-206ENST00000572083 NR1H4Q96RI1 486 aaPredicted RBP15.46■□□□□ 0.07
CCDC40-206ENST00000572083 LINC00574Q9H8X3 128 aa15.46■□□□□ 0.07
CCDC40-206ENST00000572083 SORL1Q92673 2214 aa15.45■□□□□ 0.06
CCDC40-206ENST00000572083 AQP12BA6NM10 295 aa15.45■□□□□ 0.06
CCDC40-206ENST00000572083 NPIPB11E5RHQ5 1161 aa15.45■□□□□ 0.06
CCDC40-206ENST00000572083 GAPDHP04406 335 aaKnown RBP15.45■□□□□ 0.06
CCDC40-206ENST00000572083 HTR1FP30939 366 aa15.45■□□□□ 0.06
CCDC40-206ENST00000572083 TMEM244Q5VVB8 128 aa15.45■□□□□ 0.06
CCDC40-206ENST00000572083 FAM53AQ6NSI3 398 aaPredicted RBP15.45■□□□□ 0.06
CCDC40-206ENST00000572083 AQP12AQ8IXF9 295 aa15.45■□□□□ 0.06
CCDC40-206ENST00000572083 SAXO1Q8IYX7 474 aa15.45■□□□□ 0.06
CCDC40-206ENST00000572083 OR51A4Q8NGJ6 313 aa15.45■□□□□ 0.06
CCDC40-206ENST00000572083 OR10AC1Q8NH08 325 aa15.45■□□□□ 0.06
CCDC40-206ENST00000572083 PLPPR1Q8TBJ4 325 aa15.45■□□□□ 0.06
CCDC40-206ENST00000572083 UTP4Q969X6 686 aaKnown RBP15.45■□□□□ 0.06
CCDC40-206ENST00000572083 NSL1Q96IY1 281 aa15.45■□□□□ 0.06
CCDC40-206ENST00000572083 MBOAT4Q96T53 435 aa15.45■□□□□ 0.06
CCDC40-206ENST00000572083 RASL11BQ9BPW5 248 aa15.45■□□□□ 0.06
CCDC40-206ENST00000572083 GNB4Q9HAV0 340 aa15.45■□□□□ 0.06
CCDC40-206ENST00000572083 RHOFQ9HBH0 211 aa15.45■□□□□ 0.06
CCDC40-206ENST00000572083 WARS2Q9UGM6 360 aaKnown RBP15.45■□□□□ 0.06
CCDC40-206ENST00000572083 TRAV24A0A0B4J272 114 aa15.44■□□□□ 0.06
CCDC40-206ENST00000572083 ZAR1LA6NP61 321 aa15.44■□□□□ 0.06
CCDC40-206ENST00000572083 FKBP6O75344 327 aa15.44■□□□□ 0.06
CCDC40-206ENST00000572083 FAM107AO95990 144 aa15.44■□□□□ 0.06
CCDC40-206ENST00000572083 OR8U8P0C7N1 319 aa15.44■□□□□ 0.06
CCDC40-206ENST00000572083 ISL1P61371 349 aa15.44■□□□□ 0.06
CCDC40-206ENST00000572083 OR2G2Q8NGZ5 317 aa15.44■□□□□ 0.06
CCDC40-206ENST00000572083 KCTD7Q96MP8 289 aa15.44■□□□□ 0.06
CCDC40-206ENST00000572083 OR5B12Q96R08 314 aa15.44■□□□□ 0.06
CCDC40-206ENST00000572083 S1PR3Q99500 378 aa15.44■□□□□ 0.06
CCDC40-206ENST00000572083 PLSCR3Q9NRY6 295 aa15.44■□□□□ 0.06
CCDC40-206ENST00000572083 MYRFQ9Y2G1 1151 aa15.44■□□□□ 0.06
CCDC40-206ENST00000572083 SAP30O75446 220 aa15.43■□□□□ 0.06
CCDC40-206ENST00000572083 TMEM225BP0DP42 221 aa15.43■□□□□ 0.06
CCDC40-206ENST00000572083 SPNP16150 400 aa15.43■□□□□ 0.06
CCDC40-206ENST00000572083 NANOS3P60323 173 aaKnown RBP15.43■□□□□ 0.06
CCDC40-206ENST00000572083 GNB1P62873 340 aa15.43■□□□□ 0.06
CCDC40-206ENST00000572083 ZNF616Q08AN1 781 aa15.43■□□□□ 0.06
CCDC40-206ENST00000572083 RSBN1Q5VWQ0 802 aaPredicted RBP15.43■□□□□ 0.06
CCDC40-206ENST00000572083 ZNF429Q86V71 674 aa15.43■□□□□ 0.06
CCDC40-206ENST00000572083 SPATA24Q86W54 205 aa15.43■□□□□ 0.06
CCDC40-206ENST00000572083 TMEM104Q8NE00 496 aa15.43■□□□□ 0.06
CCDC40-206ENST00000572083 OR1N2Q8NGR9 330 aa15.43■□□□□ 0.06
CCDC40-206ENST00000572083 OR13C3Q8NGS6 347 aa15.43■□□□□ 0.06
CCDC40-206ENST00000572083 BARHL1Q9BZE3 327 aa15.43■□□□□ 0.06
CCDC40-206ENST00000572083 FRRS1LQ9P0K9 344 aa15.43■□□□□ 0.06
CCDC40-206ENST00000572083 TRIM64CA6NLI5 447 aa15.42■□□□□ 0.06
CCDC40-206ENST00000572083 ZNF736B4DX44 427 aaPredicted RBP15.42■□□□□ 0.06
CCDC40-206ENST00000572083 I3L521 148 aa15.42■□□□□ 0.06
CCDC40-206ENST00000572083 MT-ND2P03891 347 aa15.42■□□□□ 0.06
CCDC40-206ENST00000572083 HOXB6P17509 224 aaKnown RBP15.42■□□□□ 0.06
CCDC40-206ENST00000572083 SOX6P35712 828 aa15.42■□□□□ 0.06
CCDC40-206ENST00000572083 ATP6V1E1P36543 226 aa15.42■□□□□ 0.06
CCDC40-206ENST00000572083 ZP1P60852 638 aa15.42■□□□□ 0.06
CCDC40-206ENST00000572083 ZNF85Q03923 595 aa15.42■□□□□ 0.06
CCDC40-206ENST00000572083 SLC16A12Q6ZSM3 486 aa15.42■□□□□ 0.06
CCDC40-206ENST00000572083 FAM71E2Q8N5Q1 922 aa15.42■□□□□ 0.06
CCDC40-206ENST00000572083 OR10A7Q8NGE5 316 aa15.42■□□□□ 0.06
CCDC40-206ENST00000572083 CNIH3Q8TBE1 160 aa15.42■□□□□ 0.06
CCDC40-206ENST00000572083 MYOZ3Q8TDC0 251 aa15.42■□□□□ 0.06
CCDC40-206ENST00000572083 NRBF2Q96F24 287 aa15.42■□□□□ 0.06
CCDC40-206ENST00000572083 KLK15Q9H2R5 256 aa15.42■□□□□ 0.06
CCDC40-206ENST00000572083 NCOR1P1Q9H4R4 102 aa15.42■□□□□ 0.06
CCDC40-206ENST00000572083 MOSP00540 346 aa15.41■□□□□ 0.06
CCDC40-206ENST00000572083 ISG15P05161 165 aa15.41■□□□□ 0.06
CCDC40-206ENST00000572083 GP9P14770 177 aa15.41■□□□□ 0.06
CCDC40-206ENST00000572083 MTNR1BP49286 362 aa15.41■□□□□ 0.06
CCDC40-206ENST00000572083 F2RL1P55085 397 aa15.41■□□□□ 0.06
CCDC40-206ENST00000572083 ZSCAN26Q16670 478 aa15.41■□□□□ 0.06
CCDC40-206ENST00000572083 UBALD1Q8TB05 177 aa15.41■□□□□ 0.06
CCDC40-206ENST00000572083 RTN4IP1Q8WWV3 396 aaPredicted RBP15.41■□□□□ 0.06
CCDC40-206ENST00000572083 DCUN1D4Q92564 292 aa15.41■□□□□ 0.06
CCDC40-206ENST00000572083 ISOC1Q96CN7 298 aa15.41■□□□□ 0.06
CCDC40-206ENST00000572083 THTPAQ9BU02 230 aa15.41■□□□□ 0.06
CCDC40-206ENST00000572083 OVOL1O14753 267 aa15.4■□□□□ 0.06
CCDC40-206ENST00000572083 IGF1P05019 195 aa15.4■□□□□ 0.06
CCDC40-206ENST00000572083 SLC2A2P11168 524 aaPredicted RBP15.4■□□□□ 0.06
CCDC40-206ENST00000572083 DBTP11182 482 aaKnown RBP15.4■□□□□ 0.06
CCDC40-206ENST00000572083 CALB2P22676 271 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms