RNA–Protein interactions for RNA: ENST00000572019.1

NUP88-203, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-203ENST00000572019 OR8H3Q8N146 312 aa14.97□□□□□ -0.01
NUP88-203ENST00000572019 RNF152Q8N8N0 203 aa14.97□□□□□ -0.01
NUP88-203ENST00000572019 UBALD1Q8TB05 177 aa14.97□□□□□ -0.01
NUP88-203ENST00000572019 EME1Q96AY2 570 aa14.97□□□□□ -0.01
NUP88-203ENST00000572019 RCHY1Q96PM5 261 aa14.97□□□□□ -0.01
NUP88-203ENST00000572019 ABCG5Q9H222 651 aa14.97□□□□□ -0.01
NUP88-203ENST00000572019 MYRFQ9Y2G1 1151 aa14.97□□□□□ -0.01
NUP88-203ENST00000572019 ZNF256Q9Y2P7 627 aaPredicted RBP14.97□□□□□ -0.01
NUP88-203ENST00000572019 LYSTQ99698 3801 aa14.97□□□□□ -0.01
NUP88-203ENST00000572019 NCBP2LA6PVI3 153 aaKnown RBP14.96□□□□□ -0.01
NUP88-203ENST00000572019 AP4M1O00189 453 aa14.96□□□□□ -0.01
NUP88-203ENST00000572019 HSD17B6O14756 317 aa14.96□□□□□ -0.01
NUP88-203ENST00000572019 ISG15P05161 165 aa14.96□□□□□ -0.01
NUP88-203ENST00000572019 GP2P55259 537 aaKnown RBP14.96□□□□□ -0.01
NUP88-203ENST00000572019 FOXE3Q13461 319 aa14.96□□□□□ -0.01
NUP88-203ENST00000572019 ZSCAN26Q16670 478 aa14.96□□□□□ -0.01
NUP88-203ENST00000572019 PAN3Q58A45 887 aaKnown RBP14.96□□□□□ -0.01
NUP88-203ENST00000572019 CXorf66Q5JRM2 361 aaPredicted RBP14.96□□□□□ -0.01
NUP88-203ENST00000572019 TMEM244Q5VVB8 128 aa14.96□□□□□ -0.01
NUP88-203ENST00000572019 OVCH2Q7RTZ1 564 aa14.96□□□□□ -0.01
NUP88-203ENST00000572019 MOB3BQ86TA1 216 aa14.96□□□□□ -0.01
NUP88-203ENST00000572019 POMPQ9Y244 141 aa14.96□□□□□ -0.01
NUP88-203ENST00000572019 CSMD3Q7Z407 3707 aa14.95□□□□□ -0.02
NUP88-203ENST00000572019 MT-ND2P03891 347 aa14.95□□□□□ -0.02
NUP88-203ENST00000572019 TMEM225BP0DP42 221 aa14.95□□□□□ -0.02
NUP88-203ENST00000572019 FAM220AQ7Z4H9 259 aa14.95□□□□□ -0.02
NUP88-203ENST00000572019 TGIF2LXQ8IUE1 241 aa14.95□□□□□ -0.02
NUP88-203ENST00000572019 SAXO1Q8IYX7 474 aa14.95□□□□□ -0.02
NUP88-203ENST00000572019 TMEM104Q8NE00 496 aa14.95□□□□□ -0.02
NUP88-203ENST00000572019 OR13C3Q8NGS6 347 aa14.95□□□□□ -0.02
NUP88-203ENST00000572019 OR10X1Q8NGY0 326 aa14.95□□□□□ -0.02
NUP88-203ENST00000572019 HAVCR2Q8TDQ0 301 aa14.95□□□□□ -0.02
NUP88-203ENST00000572019 CIB1Q99828 191 aa14.95□□□□□ -0.02
NUP88-203ENST00000572019 LIN7CQ9NUP9 197 aaKnown RBP14.95□□□□□ -0.02
NUP88-203ENST00000572019 STARD9Q9P2P6 4700 aa14.95□□□□□ -0.02
NUP88-203ENST00000572019 OR4C45A6NMZ5 311 aa14.94□□□□□ -0.02
NUP88-203ENST00000572019 FAM107AO95990 144 aa14.94□□□□□ -0.02
NUP88-203ENST00000572019 OCM2P0CE71 109 aa14.94□□□□□ -0.02
NUP88-203ENST00000572019 OCMP0CE72 109 aaPredicted RBP14.94□□□□□ -0.02
NUP88-203ENST00000572019 ZNF816Q0VGE8 651 aaPredicted RBP14.94□□□□□ -0.02
NUP88-203ENST00000572019 PIGYQ3MUY2 71 aa14.94□□□□□ -0.02
NUP88-203ENST00000572019 LPCAT4Q643R3 524 aa14.94□□□□□ -0.02
NUP88-203ENST00000572019 FDX2Q6P4F2 183 aa14.94□□□□□ -0.02
NUP88-203ENST00000572019 IZUMO1Q8IYV9 350 aa14.94□□□□□ -0.02
NUP88-203ENST00000572019 ZNF565Q8N9K5 539 aa14.94□□□□□ -0.02
NUP88-203ENST00000572019 OR10K1Q8NGX5 313 aa14.94□□□□□ -0.02
NUP88-203ENST00000572019 CNIH3Q8TBE1 160 aa14.94□□□□□ -0.02
NUP88-203ENST00000572019 GNB4Q9HAV0 340 aa14.94□□□□□ -0.02
NUP88-203ENST00000572019 LCE6AA0A183 80 aa14.93□□□□□ -0.02
NUP88-203ENST00000572019 CCRL2O00421 344 aa14.93□□□□□ -0.02
NUP88-203ENST00000572019 LY86O95711 162 aa14.93□□□□□ -0.02
NUP88-203ENST00000572019 HOXB6P17509 224 aaKnown RBP14.93□□□□□ -0.02
NUP88-203ENST00000572019 ATP6V1E1P36543 226 aa14.93□□□□□ -0.02
NUP88-203ENST00000572019 F2RL1P55085 397 aa14.93□□□□□ -0.02
NUP88-203ENST00000572019 KIAA0141Q14154 515 aaPredicted RBP14.93□□□□□ -0.02
NUP88-203ENST00000572019 KISS1Q15726 138 aa14.93□□□□□ -0.02
NUP88-203ENST00000572019 KLHL22Q53GT1 634 aa14.93□□□□□ -0.02
NUP88-203ENST00000572019 OR11H1Q8NG94 326 aa14.93□□□□□ -0.02
NUP88-203ENST00000572019 C4orf3Q8WVX3 66 aa14.93□□□□□ -0.02
NUP88-203ENST00000572019 KLK15Q9H2R5 256 aa14.93□□□□□ -0.02
NUP88-203ENST00000572019 ZCCHC4Q9H5U6 513 aa14.93□□□□□ -0.02
NUP88-203ENST00000572019 SMAD5-AS1Q9Y6J3 95 aa14.93□□□□□ -0.02
NUP88-203ENST00000572019 G3V2T6 193 aa14.92□□□□□ -0.02
NUP88-203ENST00000572019 J3QRE1 110 aa14.92□□□□□ -0.02
NUP88-203ENST00000572019 SLC31A2O15432 143 aa14.92□□□□□ -0.02
NUP88-203ENST00000572019 IGHG4P01861 327 aa14.92□□□□□ -0.02
NUP88-203ENST00000572019 ELANEP08246 267 aa14.92□□□□□ -0.02
NUP88-203ENST00000572019 PSMB8P28062 276 aa14.92□□□□□ -0.02
NUP88-203ENST00000572019 C21orf33P30042 268 aaPredicted RBP14.92□□□□□ -0.02
NUP88-203ENST00000572019 MTNR1BP49286 362 aa14.92□□□□□ -0.02
NUP88-203ENST00000572019 AMIGO2Q86SJ2 522 aa14.92□□□□□ -0.02
NUP88-203ENST00000572019 MYOZ3Q8TDC0 251 aa14.92□□□□□ -0.02
NUP88-203ENST00000572019 ST6GALNAC6Q969X2 333 aa14.92□□□□□ -0.02
NUP88-203ENST00000572019 PELI1Q96FA3 418 aa14.92□□□□□ -0.02
NUP88-203ENST00000572019 S1PR3Q99500 378 aa14.92□□□□□ -0.02
NUP88-203ENST00000572019 GABARAPL1Q9H0R8 117 aa14.92□□□□□ -0.02
NUP88-203ENST00000572019 NCOR1P1Q9H4R4 102 aa14.92□□□□□ -0.02
NUP88-203ENST00000572019 RHOFQ9HBH0 211 aa14.92□□□□□ -0.02
NUP88-203ENST00000572019 IGHV3-43A0A0B4J1X8 118 aa14.91□□□□□ -0.02
NUP88-203ENST00000572019 C15orf65H3BRN8 121 aa14.91□□□□□ -0.02
NUP88-203ENST00000572019 GAPDHP04406 335 aaKnown RBP14.91□□□□□ -0.02
NUP88-203ENST00000572019 HCKP08631 526 aa14.91□□□□□ -0.02
NUP88-203ENST00000572019 IGHV3-43DP0DP04 118 aa14.91□□□□□ -0.02
NUP88-203ENST00000572019 GNB1P62873 340 aa14.91□□□□□ -0.02
NUP88-203ENST00000572019 ATP6AP1Q15904 470 aa14.91□□□□□ -0.02
NUP88-203ENST00000572019 ZNF691Q5VV52 312 aa14.91□□□□□ -0.02
NUP88-203ENST00000572019 ZFAND6Q6FIF0 208 aa14.91□□□□□ -0.02
NUP88-203ENST00000572019 ELP2Q6IA86 826 aa14.91□□□□□ -0.02
NUP88-203ENST00000572019 Q8NFD4 153 aa14.91□□□□□ -0.02
NUP88-203ENST00000572019 OR51A2Q8NGJ7 313 aa14.91□□□□□ -0.02
NUP88-203ENST00000572019 KCTD7Q96MP8 289 aa14.91□□□□□ -0.02
NUP88-203ENST00000572019 OR5B12Q96R08 314 aa14.91□□□□□ -0.02
NUP88-203ENST00000572019 GABRPO00591 440 aa14.9□□□□□ -0.02
NUP88-203ENST00000572019 SLC16A6O15403 523 aa14.9□□□□□ -0.02
NUP88-203ENST00000572019 HTR1AP08908 422 aa14.9□□□□□ -0.02
NUP88-203ENST00000572019 FRMD6-AS1P0C7T7 363 aa14.9□□□□□ -0.02
NUP88-203ENST00000572019 FAM71E2Q8N5Q1 922 aa14.9□□□□□ -0.02
NUP88-203ENST00000572019 OR2T10Q8NGZ9 312 aa14.9□□□□□ -0.02
NUP88-203ENST00000572019 RTN4IP1Q8WWV3 396 aaPredicted RBP14.9□□□□□ -0.02
NUP88-203ENST00000572019 SLC7A6OSQ96CW6 309 aaPredicted RBP14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms