RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 PLGRKTQ9HBL7 147 aa5.68□□□□□ -1.5
SMG6-209ENST00000571442 FBLN5Q9UBX5 448 aa5.68□□□□□ -1.5
SMG6-209ENST00000571442 MEIKINA0A087WXM9 373 aa5.67□□□□□ -1.5
SMG6-209ENST00000571442 UBE2QL1A1L167 161 aa5.67□□□□□ -1.5
SMG6-209ENST00000571442 IFITM5A6NNB3 132 aa5.67□□□□□ -1.5
SMG6-209ENST00000571442 ODF3BA8MYP8 253 aa5.67□□□□□ -1.5
SMG6-209ENST00000571442 C15orf65H3BRN8 121 aa5.67□□□□□ -1.5
SMG6-209ENST00000571442 HOXA3O43365 443 aaPredicted RBP5.67□□□□□ -1.5
SMG6-209ENST00000571442 PDCD6O75340 191 aa5.67□□□□□ -1.5
SMG6-209ENST00000571442 CLPXO76031 633 aa5.67□□□□□ -1.5
SMG6-209ENST00000571442 PAHP00439 452 aa5.67□□□□□ -1.5
SMG6-209ENST00000571442 IGHV3-7P01780 117 aa5.67□□□□□ -1.5
SMG6-209ENST00000571442 IGHV4-59P01825 116 aa5.67□□□□□ -1.5
SMG6-209ENST00000571442 MT-ND4P03905 459 aa5.67□□□□□ -1.5
SMG6-209ENST00000571442 TFAP2AP05549 437 aa5.67□□□□□ -1.5
SMG6-209ENST00000571442 MELTFP08582 738 aa5.67□□□□□ -1.5
SMG6-209ENST00000571442 ARSBP15848 533 aa5.67□□□□□ -1.5
SMG6-209ENST00000571442 RAB3BP20337 219 aa5.67□□□□□ -1.5
SMG6-209ENST00000571442 MYL9P24844 172 aa5.67□□□□□ -1.5
SMG6-209ENST00000571442 CDK2P24941 298 aa5.67□□□□□ -1.5
SMG6-209ENST00000571442 FPR2P25090 351 aa5.67□□□□□ -1.5
SMG6-209ENST00000571442 CFPP27918 469 aa5.67□□□□□ -1.5
SMG6-209ENST00000571442 GLP1RP43220 463 aa5.67□□□□□ -1.5
SMG6-209ENST00000571442 UBE2E1P51965 193 aa5.67□□□□□ -1.5
SMG6-209ENST00000571442 LSM3P62310 102 aaKnown RBP5.67□□□□□ -1.5
SMG6-209ENST00000571442 UBA52P62987 128 aaKnown RBP5.67□□□□□ -1.5
SMG6-209ENST00000571442 PAX5Q02548 391 aa5.67□□□□□ -1.5
SMG6-209ENST00000571442 GPR176Q14439 515 aa5.67□□□□□ -1.5
SMG6-209ENST00000571442 SLC9A3R2Q15599 337 aa5.67□□□□□ -1.5
SMG6-209ENST00000571442 LTC4SQ16873 150 aa5.67□□□□□ -1.5
SMG6-209ENST00000571442 PLAC9Q5JTB6 97 aa5.67□□□□□ -1.5
SMG6-209ENST00000571442 NKAPLQ5M9Q1 402 aa5.67□□□□□ -1.5
SMG6-209ENST00000571442 SLC35E4Q6ICL7 350 aa5.67□□□□□ -1.5
SMG6-209ENST00000571442 RAB12Q6IQ22 244 aa5.67□□□□□ -1.5
SMG6-209ENST00000571442 Q6YL49 198 aa5.67□□□□□ -1.5
SMG6-209ENST00000571442 ZNF497Q6ZNH5 498 aa5.67□□□□□ -1.5
SMG6-209ENST00000571442 SLC16A12Q6ZSM3 486 aa5.67□□□□□ -1.5
SMG6-209ENST00000571442 USP43Q70EL4 1123 aa5.67□□□□□ -1.5
SMG6-209ENST00000571442 C6orf201Q7Z4U5 140 aa5.67□□□□□ -1.5
SMG6-209ENST00000571442 TRAPPC6BQ86SZ2 158 aa5.67□□□□□ -1.5
SMG6-209ENST00000571442 LINC00596Q86U02 117 aa5.67□□□□□ -1.5
SMG6-209ENST00000571442 GAPTQ8N292 157 aa5.67□□□□□ -1.5
SMG6-209ENST00000571442 FAM89BQ8N5H3 189 aa5.67□□□□□ -1.5
SMG6-209ENST00000571442 TEX29Q8N6K0 151 aa5.67□□□□□ -1.5
SMG6-209ENST00000571442 OR13F1Q8NGS4 319 aa5.67□□□□□ -1.5
SMG6-209ENST00000571442 OR5H6Q8NGV6 325 aa5.67□□□□□ -1.5
SMG6-209ENST00000571442 OR4K15Q8NH41 348 aa5.67□□□□□ -1.5
SMG6-209ENST00000571442 RFESDQ8TAC1 157 aa5.67□□□□□ -1.5
SMG6-209ENST00000571442 PPP1R35Q8TAP8 253 aa5.67□□□□□ -1.5
SMG6-209ENST00000571442 MRPL30Q8TCC3 161 aaKnown RBP5.67□□□□□ -1.5
SMG6-209ENST00000571442 LEAP2Q969E1 77 aa5.67□□□□□ -1.5
SMG6-209ENST00000571442 RBMXL1Q96E39 390 aaKnown RBP5.67□□□□□ -1.5
SMG6-209ENST00000571442 MRPS24Q96EL2 167 aaKnown RBP5.67□□□□□ -1.5
SMG6-209ENST00000571442 HDHD3Q9BSH5 251 aaPredicted RBP5.67□□□□□ -1.5
SMG6-209ENST00000571442 FAAP24Q9BTP7 215 aa5.67□□□□□ -1.5
SMG6-209ENST00000571442 SUCNR1Q9BXA5 334 aa5.67□□□□□ -1.5
SMG6-209ENST00000571442 TMEM59Q9BXS4 323 aa5.67□□□□□ -1.5
SMG6-209ENST00000571442 ZNF286AQ9HBT8 521 aa5.67□□□□□ -1.5
SMG6-209ENST00000571442 TNFRSF19Q9NS68 423 aa5.67□□□□□ -1.5
SMG6-209ENST00000571442 CALYQ9NYX4 217 aa5.67□□□□□ -1.5
SMG6-209ENST00000571442 GHRLQ9UBU3 117 aa5.67□□□□□ -1.5
SMG6-209ENST00000571442 STEAP1Q9UHE8 339 aa5.67□□□□□ -1.5
SMG6-209ENST00000571442 SSR3Q9UNL2 185 aa5.67□□□□□ -1.5
SMG6-209ENST00000571442 KCNK7Q9Y2U2 307 aa5.67□□□□□ -1.5
SMG6-209ENST00000571442 UBE2J1Q9Y385 318 aaPredicted RBP5.67□□□□□ -1.5
SMG6-209ENST00000571442 PEX16Q9Y5Y5 336 aa5.67□□□□□ -1.5
SMG6-209ENST00000571442 SESN1Q9Y6P5 492 aa5.67□□□□□ -1.5
SMG6-209ENST00000571442 TRGV10A0A0A0MS01 117 aa5.66□□□□□ -1.5
SMG6-209ENST00000571442 IGHV2-26A0A0B4J1V2 119 aa5.66□□□□□ -1.5
SMG6-209ENST00000571442 IGHV3-43A0A0B4J1X8 118 aa5.66□□□□□ -1.5
SMG6-209ENST00000571442 KBTBD11-OT1A0A1B0GTJ5 212 aa5.66□□□□□ -1.5
SMG6-209ENST00000571442 MEIOCA2RUB1 952 aa5.66□□□□□ -1.5
SMG6-209ENST00000571442 FAM90A10PA6NDY2 464 aa5.66□□□□□ -1.5
SMG6-209ENST00000571442 FAM90A18PA6NE21 464 aa5.66□□□□□ -1.5
SMG6-209ENST00000571442 FAM90A16PA6NEW6 464 aa5.66□□□□□ -1.5
SMG6-209ENST00000571442 FAM90A20PA6NIJ5 464 aa5.66□□□□□ -1.5
SMG6-209ENST00000571442 FAM90A8PA6NJQ4 464 aa5.66□□□□□ -1.5
SMG6-209ENST00000571442 FAM90A7PA6NKC0 464 aa5.66□□□□□ -1.5
SMG6-209ENST00000571442 ZNF729A6NN14 1252 aaPredicted RBP5.66□□□□□ -1.5
SMG6-209ENST00000571442 NOTOA8MTQ0 251 aa5.66□□□□□ -1.5
SMG6-209ENST00000571442 FAM90A22PA8MWA6 464 aa5.66□□□□□ -1.5
SMG6-209ENST00000571442 FAM90A12PA8MX19 464 aa5.66□□□□□ -1.5
SMG6-209ENST00000571442 FAM90A5PA8MXJ8 464 aa5.66□□□□□ -1.5
SMG6-209ENST00000571442 FAM90A23PA8MXZ1 464 aa5.66□□□□□ -1.5
SMG6-209ENST00000571442 C12orf77C9JDV5 145 aa5.66□□□□□ -1.5
SMG6-209ENST00000571442 NPIPB11E5RHQ5 1161 aa5.66□□□□□ -1.5
SMG6-209ENST00000571442 AIPO00170 330 aa5.66□□□□□ -1.5
SMG6-209ENST00000571442 PDCD5O14737 125 aa5.66□□□□□ -1.5
SMG6-209ENST00000571442 IL1AP01583 271 aa5.66□□□□□ -1.5
SMG6-209ENST00000571442 RBP4P02753 201 aa5.66□□□□□ -1.5
SMG6-209ENST00000571442 ARG1P05089 322 aa5.66□□□□□ -1.5
SMG6-209ENST00000571442 FAM90A15PP0C7V4 464 aa5.66□□□□□ -1.5
SMG6-209ENST00000571442 FAM90A13PP0C7W8 464 aa5.66□□□□□ -1.5
SMG6-209ENST00000571442 FAM90A14PP0C7W9 464 aa5.66□□□□□ -1.5
SMG6-209ENST00000571442 FAM90A24PP0C7X0 464 aa5.66□□□□□ -1.5
SMG6-209ENST00000571442 UBBP0CG47 229 aa5.66□□□□□ -1.5
SMG6-209ENST00000571442 IGHV3-43DP0DP04 118 aa5.66□□□□□ -1.5
SMG6-209ENST00000571442 SNRPBP14678 240 aaKnown RBP5.66□□□□□ -1.5
SMG6-209ENST00000571442 RCC1P18754 421 aaPredicted RBP5.66□□□□□ -1.5
SMG6-209ENST00000571442 FUT3P21217 361 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms