RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 GGNBP1Q5YKI7 109 aa3.04□□□□□ -1.92
SMG6-208ENST00000570874 SLC27A4Q6P1M0 643 aa3.04□□□□□ -1.92
SMG6-208ENST00000570874 HAGHLQ6PII5 290 aaPredicted RBP3.04□□□□□ -1.92
SMG6-208ENST00000570874 SLC23A3Q6PIS1 610 aa3.04□□□□□ -1.92
SMG6-208ENST00000570874 C19orf48Q6RUI8 117 aa3.04□□□□□ -1.92
SMG6-208ENST00000570874 TOMM20LQ6UXN7 152 aa3.04□□□□□ -1.92
SMG6-208ENST00000570874 BAIAP2L2Q6UXY1 529 aa3.04□□□□□ -1.92
SMG6-208ENST00000570874 RPTNQ6XPR3 784 aa3.04□□□□□ -1.92
SMG6-208ENST00000570874 C16orf47Q6ZP98 133 aaPredicted RBP3.04□□□□□ -1.92
SMG6-208ENST00000570874 Q6ZT83 130 aa3.04□□□□□ -1.92
SMG6-208ENST00000570874 C16orf82Q7Z2V1 217 aa3.04□□□□□ -1.92
SMG6-208ENST00000570874 BCDIN3DQ7Z5W3 292 aaKnown RBP3.04□□□□□ -1.92
SMG6-208ENST00000570874 CMTM1Q8IZ96 169 aa3.04□□□□□ -1.92
SMG6-208ENST00000570874 LINC00471Q8N535 108 aa3.04□□□□□ -1.92
SMG6-208ENST00000570874 ZNF614Q8N883 585 aa3.04□□□□□ -1.92
SMG6-208ENST00000570874 ZNF615Q8N8J6 731 aa3.04□□□□□ -1.92
SMG6-208ENST00000570874 COX18Q8N8Q8 333 aa3.04□□□□□ -1.92
SMG6-208ENST00000570874 SCCPDHQ8NBX0 429 aa3.04□□□□□ -1.92
SMG6-208ENST00000570874 MORN4Q8NDC4 146 aa3.04□□□□□ -1.92
SMG6-208ENST00000570874 OR4P4Q8NGL7 312 aa3.04□□□□□ -1.92
SMG6-208ENST00000570874 OR6N1Q8NGY5 312 aa3.04□□□□□ -1.92
SMG6-208ENST00000570874 OR8U1Q8NH10 309 aa3.04□□□□□ -1.92
SMG6-208ENST00000570874 OR13C6PQ8NH95 151 aa3.04□□□□□ -1.92
SMG6-208ENST00000570874 C16orf52Q8NHV5 167 aa3.04□□□□□ -1.92
SMG6-208ENST00000570874 ZNF721Q8TF20 911 aa3.04□□□□□ -1.92
SMG6-208ENST00000570874 TMEM255BQ8WV15 326 aa3.04□□□□□ -1.92
SMG6-208ENST00000570874 SFT2D1Q8WV19 159 aa3.04□□□□□ -1.92
SMG6-208ENST00000570874 IL22RA2Q969J5 263 aa3.04□□□□□ -1.92
SMG6-208ENST00000570874 TAAR8Q969N4 342 aa3.04□□□□□ -1.92
SMG6-208ENST00000570874 SEH1LQ96EE3 360 aa3.04□□□□□ -1.92
SMG6-208ENST00000570874 DUX3Q96PT4 197 aa3.04□□□□□ -1.92
SMG6-208ENST00000570874 OR8B4Q96RC9 309 aa3.04□□□□□ -1.92
SMG6-208ENST00000570874 ATF6BQ99941 703 aa3.04□□□□□ -1.92
SMG6-208ENST00000570874 GABARAPL3Q9BY60 117 aa3.04□□□□□ -1.92
SMG6-208ENST00000570874 PLA2G12AQ9BZM1 189 aa3.04□□□□□ -1.92
SMG6-208ENST00000570874 DCSTAMPQ9H295 470 aa3.04□□□□□ -1.92
SMG6-208ENST00000570874 MAP1LC3AQ9H492 121 aa3.04□□□□□ -1.92
SMG6-208ENST00000570874 ZNF556Q9HAH1 456 aa3.04□□□□□ -1.92
SMG6-208ENST00000570874 AMBNQ9NP70 447 aa3.04□□□□□ -1.92
SMG6-208ENST00000570874 B3GNT2Q9NY97 397 aa3.04□□□□□ -1.92
SMG6-208ENST00000570874 ZNF226Q9NYT6 803 aa3.04□□□□□ -1.92
SMG6-208ENST00000570874 TAS2R16Q9NYV7 291 aa3.04□□□□□ -1.92
SMG6-208ENST00000570874 JPT1Q9UK76 154 aa3.04□□□□□ -1.92
SMG6-208ENST00000570874 FBXO4Q9UKT5 387 aa3.04□□□□□ -1.92
SMG6-208ENST00000570874 KCNS2Q9ULS6 477 aa3.04□□□□□ -1.92
SMG6-208ENST00000570874 BAIAP2Q9UQB8 552 aa3.04□□□□□ -1.92
SMG6-208ENST00000570874 FBXO7Q9Y3I1 522 aa3.04□□□□□ -1.92
SMG6-208ENST00000570874 RBM7Q9Y580 266 aaKnown RBP3.04□□□□□ -1.92
SMG6-208ENST00000570874 NCOR1O75376 2440 aa3.04□□□□□ -1.92
SMG6-208ENST00000570874 KNTC1P50748 2209 aa3.04□□□□□ -1.92
SMG6-208ENST00000570874 ZNF407Q9C0G0 2248 aa3.04□□□□□ -1.92
SMG6-208ENST00000570874 WDFY4Q6ZS81 3184 aa3.04□□□□□ -1.92
SMG6-208ENST00000570874 VPS13AQ96RL7 3174 aa3.04□□□□□ -1.92
SMG6-208ENST00000570874 A0A087WUU8 490 aa3.03□□□□□ -1.92
SMG6-208ENST00000570874 IGKV3D-11A0A0A0MRZ8 115 aa3.03□□□□□ -1.92
SMG6-208ENST00000570874 TGIF2-C20orf24A0A0A6YYL0 155 aa3.03□□□□□ -1.92
SMG6-208ENST00000570874 CENPVL3A0A0U1RRI6 287 aa3.03□□□□□ -1.92
SMG6-208ENST00000570874 A0A1B0GX78 115 aa3.03□□□□□ -1.92
SMG6-208ENST00000570874 LINC00862A6NCI5 91 aa3.03□□□□□ -1.92
SMG6-208ENST00000570874 FAM74A7A6NL05 159 aa3.03□□□□□ -1.92
SMG6-208ENST00000570874 J3QRK9 145 aa3.03□□□□□ -1.92
SMG6-208ENST00000570874 NTN3O00634 580 aaPredicted RBP3.03□□□□□ -1.92
SMG6-208ENST00000570874 DVL1O14640 695 aa3.03□□□□□ -1.92
SMG6-208ENST00000570874 CRXO43186 299 aaPredicted RBP3.03□□□□□ -1.92
SMG6-208ENST00000570874 CDC14BO60729 498 aa3.03□□□□□ -1.92
SMG6-208ENST00000570874 FAM20BO75063 409 aa3.03□□□□□ -1.92
SMG6-208ENST00000570874 ATG12O94817 140 aa3.03□□□□□ -1.92
SMG6-208ENST00000570874 IGF2P01344 180 aa3.03□□□□□ -1.92
SMG6-208ENST00000570874 MBPP02686 304 aaPredicted RBP3.03□□□□□ -1.92
SMG6-208ENST00000570874 CELA2AP08217 269 aa3.03□□□□□ -1.92
SMG6-208ENST00000570874 NPSP0C0P6 89 aa3.03□□□□□ -1.92
SMG6-208ENST00000570874 TFPIP10646 304 aa3.03□□□□□ -1.92
SMG6-208ENST00000570874 BMP4P12644 408 aa3.03□□□□□ -1.92
SMG6-208ENST00000570874 CCL4P13236 92 aa3.03□□□□□ -1.92
SMG6-208ENST00000570874 PAX1P15863 534 aa3.03□□□□□ -1.92
SMG6-208ENST00000570874 MUC1P15941 1255 aaPredicted RBP3.03□□□□□ -1.92
SMG6-208ENST00000570874 NR4A1P22736 598 aa3.03□□□□□ -1.92
SMG6-208ENST00000570874 PSMB9P28065 219 aa3.03□□□□□ -1.92
SMG6-208ENST00000570874 LOXP28300 417 aaPredicted RBP3.03□□□□□ -1.92
SMG6-208ENST00000570874 CHATP28329 748 aa3.03□□□□□ -1.92
SMG6-208ENST00000570874 DDTP30046 118 aa3.03□□□□□ -1.92
SMG6-208ENST00000570874 S100A7P31151 101 aa3.03□□□□□ -1.92
SMG6-208ENST00000570874 CEACAM8P31997 349 aaPredicted RBP3.03□□□□□ -1.92
SMG6-208ENST00000570874 GGT2P36268 569 aa3.03□□□□□ -1.92
SMG6-208ENST00000570874 OR3A4PP47883 348 aa3.03□□□□□ -1.92
SMG6-208ENST00000570874 RORCP51449 518 aa3.03□□□□□ -1.92
SMG6-208ENST00000570874 DVL1P1P54792 670 aaPredicted RBP3.03□□□□□ -1.92
SMG6-208ENST00000570874 PAX9P55771 341 aa3.03□□□□□ -1.92
SMG6-208ENST00000570874 PIGPP57054 158 aa3.03□□□□□ -1.92
SMG6-208ENST00000570874 TAS2R31P59538 309 aa3.03□□□□□ -1.92
SMG6-208ENST00000570874 SELENOTP62341 195 aa3.03□□□□□ -1.92
SMG6-208ENST00000570874 RPL31P62899 125 aaKnown RBP3.03□□□□□ -1.92
SMG6-208ENST00000570874 ADAM8P78325 824 aa3.03□□□□□ -1.92
SMG6-208ENST00000570874 GAGE5Q13069 117 aa3.03□□□□□ -1.92
SMG6-208ENST00000570874 GAGE6Q13070 117 aa3.03□□□□□ -1.92
SMG6-208ENST00000570874 C1DQ13901 141 aaKnown RBP3.03□□□□□ -1.92
SMG6-208ENST00000570874 CDK10Q15131 360 aa3.03□□□□□ -1.92
SMG6-208ENST00000570874 OR8G1Q15617 311 aa3.03□□□□□ -1.92
SMG6-208ENST00000570874 FAM74A3Q4VXF1 159 aa3.03□□□□□ -1.92
SMG6-208ENST00000570874 SLC25A30Q5SVS4 291 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms