RNA–Protein interactions for RNA: ENST00000570510.6

VPS53-207, Transcript of VPS53, GARP complex subunit, humanhuman

TSL 4

Gene VPS53, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53-207ENST00000570510 RPL22L1Q6P5R6 122 aaKnown RBP8.67□□□□□ -1.02
VPS53-207ENST00000570510 SATL1Q86VE3 508 aa8.67□□□□□ -1.02
VPS53-207ENST00000570510 C5orf56Q8N8D9 126 aa8.67□□□□□ -1.02
VPS53-207ENST00000570510 OR52N1Q8NH53 320 aa8.67□□□□□ -1.02
VPS53-207ENST00000570510 C4orf3Q8WVX3 66 aa8.67□□□□□ -1.02
VPS53-207ENST00000570510 APH1BQ8WW43 257 aa8.67□□□□□ -1.02
VPS53-207ENST00000570510 TOMM40LQ969M1 308 aa8.67□□□□□ -1.02
VPS53-207ENST00000570510 ST6GALNAC6Q969X2 333 aa8.67□□□□□ -1.02
VPS53-207ENST00000570510 TBX5Q99593 518 aa8.67□□□□□ -1.02
VPS53-207ENST00000570510 COMMD4Q9H0A8 199 aa8.67□□□□□ -1.02
VPS53-207ENST00000570510 FRRS1LQ9P0K9 344 aa8.67□□□□□ -1.02
VPS53-207ENST00000570510 TRGV10A0A0A0MS01 117 aa8.66□□□□□ -1.02
VPS53-207ENST00000570510 LOC107986453A0A1B0GWG9 222 aa8.66□□□□□ -1.02
VPS53-207ENST00000570510 TRIM64CA6NLI5 447 aa8.66□□□□□ -1.02
VPS53-207ENST00000570510 OR4C45A6NMZ5 311 aa8.66□□□□□ -1.02
VPS53-207ENST00000570510 NCBP2LA6PVI3 153 aaKnown RBP8.66□□□□□ -1.02
VPS53-207ENST00000570510 H3BSH0 61 aa8.66□□□□□ -1.02
VPS53-207ENST00000570510 BUB1B-PAK6H3BSN5 160 aa8.66□□□□□ -1.02
VPS53-207ENST00000570510 FGF16O43320 207 aa8.66□□□□□ -1.02
VPS53-207ENST00000570510 INMTO95050 263 aa8.66□□□□□ -1.02
VPS53-207ENST00000570510 RPP14O95059 124 aaKnown RBP8.66□□□□□ -1.02
VPS53-207ENST00000570510 LY6G6CO95867 125 aa8.66□□□□□ -1.02
VPS53-207ENST00000570510 IGHG2P01859 326 aa8.66□□□□□ -1.02
VPS53-207ENST00000570510 ELANEP08246 267 aa8.66□□□□□ -1.02
VPS53-207ENST00000570510 THNSL2Q86YJ6 484 aa8.66□□□□□ -1.02
VPS53-207ENST00000570510 SGPP2Q8IWX5 399 aa8.66□□□□□ -1.02
VPS53-207ENST00000570510 SAXO1Q8IYX7 474 aa8.66□□□□□ -1.02
VPS53-207ENST00000570510 PRSS35Q8N3Z0 413 aa8.66□□□□□ -1.02
VPS53-207ENST00000570510 PARP16Q8N5Y8 322 aa8.66□□□□□ -1.02
VPS53-207ENST00000570510 OR4D6Q8NGJ1 314 aa8.66□□□□□ -1.02
VPS53-207ENST00000570510 OR52I1Q8NGK6 324 aa8.66□□□□□ -1.02
VPS53-207ENST00000570510 OR5D14Q8NGL3 314 aa8.66□□□□□ -1.02
VPS53-207ENST00000570510 OR6Q1Q8NGQ2 317 aa8.66□□□□□ -1.02
VPS53-207ENST00000570510 OR56B4Q8NH76 319 aa8.66□□□□□ -1.02
VPS53-207ENST00000570510 CYGBQ8WWM9 190 aa8.66□□□□□ -1.02
VPS53-207ENST00000570510 RNF166Q96A37 237 aaPredicted RBP8.66□□□□□ -1.02
VPS53-207ENST00000570510 TMEM80Q96HE8 168 aa8.66□□□□□ -1.02
VPS53-207ENST00000570510 C4orf36Q96KX1 117 aa8.66□□□□□ -1.02
VPS53-207ENST00000570510 CHST6Q9GZX3 395 aa8.66□□□□□ -1.02
VPS53-207ENST00000570510 HES4Q9HCC6 221 aa8.66□□□□□ -1.02
VPS53-207ENST00000570510 GTF2A1LQ9UNN4 478 aa8.66□□□□□ -1.02
VPS53-207ENST00000570510 UBE2J1Q9Y385 318 aaPredicted RBP8.66□□□□□ -1.02
VPS53-207ENST00000570510 SORL1Q92673 2214 aa8.65□□□□□ -1.02
VPS53-207ENST00000570510 J3QLW9 94 aa8.65□□□□□ -1.02
VPS53-207ENST00000570510 ZNF737O75373 536 aa8.65□□□□□ -1.02
VPS53-207ENST00000570510 MMP23AO75900 390 aa8.65□□□□□ -1.02
VPS53-207ENST00000570510 CYB5AP00167 134 aa8.65□□□□□ -1.02
VPS53-207ENST00000570510 CD2P06729 351 aa8.65□□□□□ -1.02
VPS53-207ENST00000570510 LIMS3P0CW19 117 aa8.65□□□□□ -1.02
VPS53-207ENST00000570510 LIMS4P0CW20 117 aa8.65□□□□□ -1.02
VPS53-207ENST00000570510 IGHV4-30-4P0DP06 118 aa8.65□□□□□ -1.02
VPS53-207ENST00000570510 ZNF19P17023 458 aa8.65□□□□□ -1.02
VPS53-207ENST00000570510 VDAC1P21796 283 aa8.65□□□□□ -1.02
VPS53-207ENST00000570510 RBP2P50120 134 aa8.65□□□□□ -1.02
VPS53-207ENST00000570510 ATP1B3P54709 279 aa8.65□□□□□ -1.02
VPS53-207ENST00000570510 ERVK11-1P61568 191 aa8.65□□□□□ -1.02
VPS53-207ENST00000570510 ZNF616Q08AN1 781 aa8.65□□□□□ -1.02
VPS53-207ENST00000570510 HLA-DRB5Q30154 266 aa8.65□□□□□ -1.02
VPS53-207ENST00000570510 TP53I3Q53FA7 332 aa8.65□□□□□ -1.02
VPS53-207ENST00000570510 TMEM65Q6PI78 240 aa8.65□□□□□ -1.02
VPS53-207ENST00000570510 SERPINA12Q8IW75 414 aa8.65□□□□□ -1.02
VPS53-207ENST00000570510 OR1N2Q8NGR9 330 aa8.65□□□□□ -1.02
VPS53-207ENST00000570510 OR5AK2Q8NH90 309 aa8.65□□□□□ -1.02
VPS53-207ENST00000570510 BORCS8Q96FH0 119 aa8.65□□□□□ -1.02
VPS53-207ENST00000570510 BABAM2Q9NXR7 383 aa8.65□□□□□ -1.02
VPS53-207ENST00000570510 MYRFQ9Y2G1 1151 aa8.65□□□□□ -1.02
VPS53-207ENST00000570510 AMMECR1Q9Y4X0 333 aaPredicted RBP8.65□□□□□ -1.02
VPS53-207ENST00000570510 FUOMA2VDF0 154 aa8.64□□□□□ -1.03
VPS53-207ENST00000570510 OVOL1O14753 267 aa8.64□□□□□ -1.03
VPS53-207ENST00000570510 OGG1O15527 345 aa8.64□□□□□ -1.03
VPS53-207ENST00000570510 APOL3O95236 402 aa8.64□□□□□ -1.03
VPS53-207ENST00000570510 IGLV1-47P01700 117 aa8.64□□□□□ -1.03
VPS53-207ENST00000570510 ZNF20P17024 532 aa8.64□□□□□ -1.03
VPS53-207ENST00000570510 NFYBP25208 207 aa8.64□□□□□ -1.03
VPS53-207ENST00000570510 KIR3DL2P43630 455 aa8.64□□□□□ -1.03
VPS53-207ENST00000570510 FHL3Q13643 280 aa8.64□□□□□ -1.03
VPS53-207ENST00000570510 LRRC36Q1X8D7 754 aa8.64□□□□□ -1.03
VPS53-207ENST00000570510 BAIAP2L2Q6UXY1 529 aa8.64□□□□□ -1.03
VPS53-207ENST00000570510 HEPN1Q6WQI6 88 aa8.64□□□□□ -1.03
VPS53-207ENST00000570510 TCF23Q7RTU1 214 aa8.64□□□□□ -1.03
VPS53-207ENST00000570510 LHFPL3Q86UP9 236 aa8.64□□□□□ -1.03
VPS53-207ENST00000570510 ANGPTL5Q86XS5 388 aa8.64□□□□□ -1.03
VPS53-207ENST00000570510 GPR148Q8TDV2 347 aa8.64□□□□□ -1.03
VPS53-207ENST00000570510 GPR173Q9NS66 373 aa8.64□□□□□ -1.03
VPS53-207ENST00000570510 PSORS1C1Q9UIG5 152 aa8.64□□□□□ -1.03
VPS53-207ENST00000570510 TRBV2A0A0J9YWF9 115 aa8.63□□□□□ -1.03
VPS53-207ENST00000570510 TMEM82A0PJX8 343 aa8.63□□□□□ -1.03
VPS53-207ENST00000570510 LINC01548A6NM66 108 aa8.63□□□□□ -1.03
VPS53-207ENST00000570510 MGST3O14880 152 aa8.63□□□□□ -1.03
VPS53-207ENST00000570510 MAGEB4O15481 346 aaPredicted RBP8.63□□□□□ -1.03
VPS53-207ENST00000570510 GPX5O75715 221 aa8.63□□□□□ -1.03
VPS53-207ENST00000570510 HAND1O96004 215 aa8.63□□□□□ -1.03
VPS53-207ENST00000570510 IGKV1D-33P01593 117 aa8.63□□□□□ -1.03
VPS53-207ENST00000570510 IGKV1-33P01594 117 aa8.63□□□□□ -1.03
VPS53-207ENST00000570510 ATF1P18846 271 aa8.63□□□□□ -1.03
VPS53-207ENST00000570510 RANBP1P43487 201 aa8.63□□□□□ -1.03
VPS53-207ENST00000570510 NANOS3P60323 173 aaKnown RBP8.63□□□□□ -1.03
VPS53-207ENST00000570510 CDK5R1Q15078 307 aa8.63□□□□□ -1.03
VPS53-207ENST00000570510 UBE2V2Q15819 145 aa8.63□□□□□ -1.03
VPS53-207ENST00000570510 YIF1BQ5BJH7 314 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms