RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 DVL1O14640 695 aa12.81□□□□□ -0.36
HERPUD1-219ENST00000570273 MT-ND4P03905 459 aa12.81□□□□□ -0.36
HERPUD1-219ENST00000570273 GSTT2BP0CG30 244 aa12.81□□□□□ -0.36
HERPUD1-219ENST00000570273 DSCR9P59020 149 aa12.81□□□□□ -0.36
HERPUD1-219ENST00000570273 MOB1BQ7L9L4 216 aa12.81□□□□□ -0.36
HERPUD1-219ENST00000570273 HOGA1Q86XE5 327 aa12.81□□□□□ -0.36
HERPUD1-219ENST00000570273 GAPTQ8N292 157 aa12.81□□□□□ -0.36
HERPUD1-219ENST00000570273 FGFRL1Q8N441 504 aa12.81□□□□□ -0.36
HERPUD1-219ENST00000570273 TOMM5Q8N4H5 51 aa12.81□□□□□ -0.36
HERPUD1-219ENST00000570273 TPRX1Q8N7U7 411 aa12.81□□□□□ -0.36
HERPUD1-219ENST00000570273 CCDC107Q8WV48 283 aa12.81□□□□□ -0.36
HERPUD1-219ENST00000570273 NINJ1Q92982 152 aa12.81□□□□□ -0.36
HERPUD1-219ENST00000570273 MBD6Q96DN6 1003 aa12.81□□□□□ -0.36
HERPUD1-219ENST00000570273 ZNF286AQ9HBT8 521 aa12.81□□□□□ -0.36
HERPUD1-219ENST00000570273 PALMDQ9NP74 551 aa12.81□□□□□ -0.36
HERPUD1-219ENST00000570273 TRAPPC2LQ9UL33 140 aa12.81□□□□□ -0.36
HERPUD1-219ENST00000570273 TRBV6-6A0A0A6YYG2 114 aa12.8□□□□□ -0.36
HERPUD1-219ENST00000570273 TRAV39A0A0B4J263 110 aa12.8□□□□□ -0.36
HERPUD1-219ENST00000570273 ODAMA1E959 279 aa12.8□□□□□ -0.36
HERPUD1-219ENST00000570273 CSF1P09603 554 aa12.8□□□□□ -0.36
HERPUD1-219ENST00000570273 GLP1RP43220 463 aa12.8□□□□□ -0.36
HERPUD1-219ENST00000570273 GLIPR1P48060 266 aa12.8□□□□□ -0.36
HERPUD1-219ENST00000570273 AP3S2P59780 193 aa12.8□□□□□ -0.36
HERPUD1-219ENST00000570273 PAX5Q02548 391 aa12.8□□□□□ -0.36
HERPUD1-219ENST00000570273 STEAP3Q658P3 488 aa12.8□□□□□ -0.36
HERPUD1-219ENST00000570273 Q6ZPA2 131 aa12.8□□□□□ -0.36
HERPUD1-219ENST00000570273 LRRC75A-AS1Q8N1F1 130 aa12.8□□□□□ -0.36
HERPUD1-219ENST00000570273 BEST4Q8NFU0 473 aa12.8□□□□□ -0.36
HERPUD1-219ENST00000570273 H1FXQ92522 213 aaKnown RBP12.8□□□□□ -0.36
HERPUD1-219ENST00000570273 PATZ1Q9HBE1 687 aaKnown RBP12.8□□□□□ -0.36
HERPUD1-219ENST00000570273 Q9N2K0 584 aa12.8□□□□□ -0.36
HERPUD1-219ENST00000570273 TAS2R8Q9NYW2 309 aa12.8□□□□□ -0.36
HERPUD1-219ENST00000570273 CSMD1Q96PZ7 3565 aa12.8□□□□□ -0.36
HERPUD1-219ENST00000570273 F5H0A9 414 aaPredicted RBP12.79□□□□□ -0.36
HERPUD1-219ENST00000570273 ECDO95905 644 aaPredicted RBP12.79□□□□□ -0.36
HERPUD1-219ENST00000570273 HLA-DMAP28067 261 aa12.79□□□□□ -0.36
HERPUD1-219ENST00000570273 ERP29P30040 261 aaKnown RBP12.79□□□□□ -0.36
HERPUD1-219ENST00000570273 IFITM3Q01628 133 aa12.79□□□□□ -0.36
HERPUD1-219ENST00000570273 KLF9Q13886 244 aaPredicted RBP12.79□□□□□ -0.36
HERPUD1-219ENST00000570273 CLEC12BQ2HXU8 276 aa12.79□□□□□ -0.36
HERPUD1-219ENST00000570273 OR52W1Q6IF63 320 aa12.79□□□□□ -0.36
HERPUD1-219ENST00000570273 LYSMD2Q8IV50 215 aa12.79□□□□□ -0.36
HERPUD1-219ENST00000570273 SNAPC3Q92966 411 aa12.79□□□□□ -0.36
HERPUD1-219ENST00000570273 POLQO75417 2590 aa12.79□□□□□ -0.36
HERPUD1-219ENST00000570273 TEX15Q9BXT5 2789 aa12.79□□□□□ -0.36
HERPUD1-219ENST00000570273 NAV2Q8IVL1 2488 aa12.79□□□□□ -0.36
HERPUD1-219ENST00000570273 IGHV4-30-2A0A087WSY4 118 aa12.79□□□□□ -0.36
HERPUD1-219ENST00000570273 ANKRD20A5PA0PJZ0 165 aa12.79□□□□□ -0.36
HERPUD1-219ENST00000570273 ZNF736B4DX44 427 aaPredicted RBP12.79□□□□□ -0.36
HERPUD1-219ENST00000570273 FCN3O75636 299 aa12.79□□□□□ -0.36
HERPUD1-219ENST00000570273 WNT2P09544 360 aa12.79□□□□□ -0.36
HERPUD1-219ENST00000570273 NAT1P18440 290 aa12.79□□□□□ -0.36
HERPUD1-219ENST00000570273 TAS2R19P59542 299 aa12.79□□□□□ -0.36
HERPUD1-219ENST00000570273 ARPC4P59998 168 aa12.79□□□□□ -0.36
HERPUD1-219ENST00000570273 HLA-DRB3P79483 266 aa12.79□□□□□ -0.36
HERPUD1-219ENST00000570273 C6orf183Q5T699 404 aa12.79□□□□□ -0.36
HERPUD1-219ENST00000570273 ZNF880Q6PDB4 577 aa12.79□□□□□ -0.36
HERPUD1-219ENST00000570273 TMEM229BQ8NBD8 167 aa12.79□□□□□ -0.36
HERPUD1-219ENST00000570273 OR13A1Q8NGR1 328 aa12.79□□□□□ -0.36
HERPUD1-219ENST00000570273 CLDND2Q8NHS1 167 aa12.79□□□□□ -0.36
HERPUD1-219ENST00000570273 MRGPRDQ8TDS7 321 aa12.79□□□□□ -0.36
HERPUD1-219ENST00000570273 COX4I2Q96KJ9 171 aa12.79□□□□□ -0.36
HERPUD1-219ENST00000570273 CLN8Q9UBY8 286 aa12.79□□□□□ -0.36
HERPUD1-219ENST00000570273 ZNF107Q9UII5 783 aaPredicted RBP12.79□□□□□ -0.36
HERPUD1-219ENST00000570273 MGAT4AQ9UM21 535 aa12.79□□□□□ -0.36
HERPUD1-219ENST00000570273 IGKV1D-8A0A087WSZ0 117 aa12.78□□□□□ -0.36
HERPUD1-219ENST00000570273 KIR2DS1A0A191URI9 304 aa12.78□□□□□ -0.36
HERPUD1-219ENST00000570273 MEX3AA1L020 520 aaKnown RBP12.78□□□□□ -0.36
HERPUD1-219ENST00000570273 POM121CA8CG34 1229 aa12.78□□□□□ -0.36
HERPUD1-219ENST00000570273 VWC2LB2RUY7 222 aa12.78□□□□□ -0.36
HERPUD1-219ENST00000570273 IGHV2-5P01817 119 aa12.78□□□□□ -0.36
HERPUD1-219ENST00000570273 CD3DP04234 171 aa12.78□□□□□ -0.36
HERPUD1-219ENST00000570273 AKAIN1P0CW23 69 aa12.78□□□□□ -0.36
HERPUD1-219ENST00000570273 RCC1P18754 421 aaPredicted RBP12.78□□□□□ -0.36
HERPUD1-219ENST00000570273 KIR2DS4P43632 304 aa12.78□□□□□ -0.36
HERPUD1-219ENST00000570273 TAS2R46P59540 309 aa12.78□□□□□ -0.36
HERPUD1-219ENST00000570273 DEFA1P59665 94 aa12.78□□□□□ -0.36
HERPUD1-219ENST00000570273 DEFA3P59666 94 aa12.78□□□□□ -0.36
HERPUD1-219ENST00000570273 SEC61A1P61619 476 aaKnown RBP12.78□□□□□ -0.36
HERPUD1-219ENST00000570273 KIR2DS1Q14954 304 aa12.78□□□□□ -0.36
HERPUD1-219ENST00000570273 CHRFAM7AQ494W8 412 aa12.78□□□□□ -0.36
HERPUD1-219ENST00000570273 ACTBL2Q562R1 376 aa12.78□□□□□ -0.36
HERPUD1-219ENST00000570273 Q5PR19 223 aa12.78□□□□□ -0.36
HERPUD1-219ENST00000570273 WDR25Q64LD2 544 aaPredicted RBP12.78□□□□□ -0.36
HERPUD1-219ENST00000570273 ZNF841Q6ZN19 808 aa12.78□□□□□ -0.36
HERPUD1-219ENST00000570273 Q6ZS49 121 aa12.78□□□□□ -0.36
HERPUD1-219ENST00000570273 FAM185AQ8N0U4 392 aa12.78□□□□□ -0.36
HERPUD1-219ENST00000570273 OR5H2Q8NGV7 314 aa12.78□□□□□ -0.36
HERPUD1-219ENST00000570273 ZFAND2BQ8WV99 257 aa12.78□□□□□ -0.36
HERPUD1-219ENST00000570273 DCTN5Q9BTE1 182 aa12.78□□□□□ -0.36
HERPUD1-219ENST00000570273 KCNIP1Q9NZI2 227 aa12.78□□□□□ -0.36
HERPUD1-219ENST00000570273 OR6C3Q9NZP0 311 aa12.78□□□□□ -0.36
HERPUD1-219ENST00000570273 MAST4O15021 2626 aa12.77□□□□□ -0.36
HERPUD1-219ENST00000570273 ARID1AO14497 2285 aa12.77□□□□□ -0.36
HERPUD1-219ENST00000570273 TRGV10A0A0A0MS01 117 aa12.77□□□□□ -0.37
HERPUD1-219ENST00000570273 hADV38S2A0JD32 116 aa12.77□□□□□ -0.37
HERPUD1-219ENST00000570273 TRDCB7Z8K6 153 aa12.77□□□□□ -0.37
HERPUD1-219ENST00000570273 M0QYG6 137 aa12.77□□□□□ -0.37
HERPUD1-219ENST00000570273 FABP7O15540 132 aa12.77□□□□□ -0.37
HERPUD1-219ENST00000570273 RAB3DO95716 219 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms