RNA–Protein interactions for RNA: ENST00000569924.1

CNOT1-221, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-221ENST00000569924 TRRAPQ9Y4A5 3859 aa2.48□□□□□ -2.01
CNOT1-221ENST00000569924 IGKV1D-8A0A087WSZ0 117 aa2.48□□□□□ -2.01
CNOT1-221ENST00000569924 A0A087X002 238 aa2.48□□□□□ -2.01
CNOT1-221ENST00000569924 IGHV3-16A0A0C4DH30 117 aa2.48□□□□□ -2.01
CNOT1-221ENST00000569924 A0A1W2PRF3 423 aa2.48□□□□□ -2.01
CNOT1-221ENST00000569924 A0A1W2PRM7 423 aa2.48□□□□□ -2.01
CNOT1-221ENST00000569924 MEX3AA1L020 520 aaKnown RBP2.48□□□□□ -2.01
CNOT1-221ENST00000569924 TMEM114B3SHH9 223 aa2.48□□□□□ -2.01
CNOT1-221ENST00000569924 ATP6V1G2-DDX39BF2Z307 99 aa2.48□□□□□ -2.01
CNOT1-221ENST00000569924 M0R1B8 84 aa2.48□□□□□ -2.01
CNOT1-221ENST00000569924 AZIN1O14977 448 aa2.48□□□□□ -2.01
CNOT1-221ENST00000569924 SCAMP2O15127 329 aaKnown RBP2.48□□□□□ -2.01
CNOT1-221ENST00000569924 XRCC2O43543 280 aa2.48□□□□□ -2.01
CNOT1-221ENST00000569924 PLIN3O60664 434 aa2.48□□□□□ -2.01
CNOT1-221ENST00000569924 EIF1BO60739 113 aaKnown RBP2.48□□□□□ -2.01
CNOT1-221ENST00000569924 ENTPD5O75356 428 aa2.48□□□□□ -2.01
CNOT1-221ENST00000569924 LYPLA1O75608 230 aaPredicted RBP2.48□□□□□ -2.01
CNOT1-221ENST00000569924 LY6HO94772 140 aa2.48□□□□□ -2.01
CNOT1-221ENST00000569924 RENP00797 406 aa2.48□□□□□ -2.01
CNOT1-221ENST00000569924 IGKV2-30P06310 120 aa2.48□□□□□ -2.01
CNOT1-221ENST00000569924 S100A6P06703 90 aa2.48□□□□□ -2.01
CNOT1-221ENST00000569924 LAMP1P11279 417 aa2.48□□□□□ -2.01
CNOT1-221ENST00000569924 NQO2P16083 231 aa2.48□□□□□ -2.01
CNOT1-221ENST00000569924 ZNF26P17031 533 aaPredicted RBP2.48□□□□□ -2.01
CNOT1-221ENST00000569924 SLC2A5P22732 501 aa2.48□□□□□ -2.01
CNOT1-221ENST00000569924 ANOS1P23352 680 aa2.48□□□□□ -2.01
CNOT1-221ENST00000569924 PPOXP50336 477 aa2.48□□□□□ -2.01
CNOT1-221ENST00000569924 IDH3GP51553 393 aaPredicted RBP2.48□□□□□ -2.01
CNOT1-221ENST00000569924 PRPS1P60891 318 aa2.48□□□□□ -2.01
CNOT1-221ENST00000569924 RPL38P63173 70 aaKnown RBP2.48□□□□□ -2.01
CNOT1-221ENST00000569924 SLC35A1P78382 337 aa2.48□□□□□ -2.01
CNOT1-221ENST00000569924 H3F3AP84243 136 aa2.48□□□□□ -2.01
CNOT1-221ENST00000569924 TRMT5Q32P41 509 aaKnown RBP2.48□□□□□ -2.01
CNOT1-221ENST00000569924 NDUFAF6Q330K2 333 aa2.48□□□□□ -2.01
CNOT1-221ENST00000569924 CCDC153Q494R4 210 aa2.48□□□□□ -2.01
CNOT1-221ENST00000569924 KLF17Q5JT82 389 aaPredicted RBP2.48□□□□□ -2.01
CNOT1-221ENST00000569924 VAX1Q5SQQ9 334 aa2.48□□□□□ -2.01
CNOT1-221ENST00000569924 C9orf66Q5T8R8 295 aa2.48□□□□□ -2.01
CNOT1-221ENST00000569924 TMPRSS11AQ6ZMR5 421 aa2.48□□□□□ -2.01
CNOT1-221ENST00000569924 TRMT10CQ7L0Y3 403 aaKnown RBP2.48□□□□□ -2.01
CNOT1-221ENST00000569924 OR2W3Q7Z3T1 314 aa2.48□□□□□ -2.01
CNOT1-221ENST00000569924 GRINAQ7Z429 371 aa2.48□□□□□ -2.01
CNOT1-221ENST00000569924 ABHD12BQ7Z5M8 362 aaPredicted RBP2.48□□□□□ -2.01
CNOT1-221ENST00000569924 LHFPL3Q86UP9 236 aa2.48□□□□□ -2.01
CNOT1-221ENST00000569924 ZNF786Q8N393 782 aa2.48□□□□□ -2.01
CNOT1-221ENST00000569924 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.48□□□□□ -2.01
CNOT1-221ENST00000569924 ZNF614Q8N883 585 aa2.48□□□□□ -2.01
CNOT1-221ENST00000569924 OR4F15Q8NGB8 312 aa2.48□□□□□ -2.01
CNOT1-221ENST00000569924 OR52E4Q8NGH9 312 aa2.48□□□□□ -2.01
CNOT1-221ENST00000569924 SGMS2Q8NHU3 365 aa2.48□□□□□ -2.01
CNOT1-221ENST00000569924 FBXO17Q96EF6 278 aa2.48□□□□□ -2.01
CNOT1-221ENST00000569924 CHMP6Q96FZ7 201 aa2.48□□□□□ -2.01
CNOT1-221ENST00000569924 DUS3LQ96G46 650 aaKnown RBP2.48□□□□□ -2.01
CNOT1-221ENST00000569924 POM121L2Q96KW2 1035 aa2.48□□□□□ -2.01
CNOT1-221ENST00000569924 PPP3R2Q96LZ3 170 aa2.48□□□□□ -2.01
CNOT1-221ENST00000569924 ATF6BQ99941 703 aa2.48□□□□□ -2.01
CNOT1-221ENST00000569924 KCTD14Q9BQ13 255 aaPredicted RBP2.48□□□□□ -2.01
CNOT1-221ENST00000569924 C1QTNF6Q9BXI9 259 aa2.48□□□□□ -2.01
CNOT1-221ENST00000569924 MAP1LC3CQ9BXW4 147 aa2.48□□□□□ -2.01
CNOT1-221ENST00000569924 BPESC1Q9GZL8 116 aa2.48□□□□□ -2.01
CNOT1-221ENST00000569924 TUBB1Q9H4B7 451 aa2.48□□□□□ -2.01
CNOT1-221ENST00000569924 BEX1Q9HBH7 125 aa2.48□□□□□ -2.01
CNOT1-221ENST00000569924 CTPS2Q9NRF8 586 aa2.48□□□□□ -2.01
CNOT1-221ENST00000569924 PYCARDQ9ULZ3 195 aa2.48□□□□□ -2.01
CNOT1-221ENST00000569924 MOKQ9UQ07 419 aa2.48□□□□□ -2.01
CNOT1-221ENST00000569924 SLC35A3Q9Y2D2 325 aa2.48□□□□□ -2.01
CNOT1-221ENST00000569924 RCL1Q9Y2P8 373 aaKnown RBP2.48□□□□□ -2.01
CNOT1-221ENST00000569924 FLVCR1Q9Y5Y0 555 aa2.48□□□□□ -2.01
CNOT1-221ENST00000569924 KCNE3Q9Y6H6 103 aa2.48□□□□□ -2.01
CNOT1-221ENST00000569924 EPPK1P58107 5090 aaKnown RBP2.48□□□□□ -2.01
CNOT1-221ENST00000569924 TGP01266 2768 aa2.48□□□□□ -2.01
CNOT1-221ENST00000569924 IGHV1-18A0A0C4DH31 117 aa2.47□□□□□ -2.01
CNOT1-221ENST00000569924 TRPC5OSA6NMA1 111 aa2.47□□□□□ -2.01
CNOT1-221ENST00000569924 B4DSR2 109 aa2.47□□□□□ -2.01
CNOT1-221ENST00000569924 FAAHO00519 579 aa2.47□□□□□ -2.01
CNOT1-221ENST00000569924 IDH3BO43837 385 aa2.47□□□□□ -2.01
CNOT1-221ENST00000569924 MGRN1O60291 552 aa2.47□□□□□ -2.01
CNOT1-221ENST00000569924 NDUFS6O75380 124 aaKnown RBP2.47□□□□□ -2.01
CNOT1-221ENST00000569924 VAMP5O95183 116 aa2.47□□□□□ -2.01
CNOT1-221ENST00000569924 VENTXO95231 258 aa2.47□□□□□ -2.01
CNOT1-221ENST00000569924 DUS4LO95620 317 aaKnown RBP2.47□□□□□ -2.01
CNOT1-221ENST00000569924 C6orf47O95873 294 aa2.47□□□□□ -2.01
CNOT1-221ENST00000569924 CST4P01036 141 aa2.47□□□□□ -2.01
CNOT1-221ENST00000569924 IGKV3-15P01624 115 aa2.47□□□□□ -2.01
CNOT1-221ENST00000569924 IGLV1-44P01699 117 aa2.47□□□□□ -2.01
CNOT1-221ENST00000569924 OR4A8P0C604 315 aa2.47□□□□□ -2.01
CNOT1-221ENST00000569924 LINC00032P0C843 101 aa2.47□□□□□ -2.01
CNOT1-221ENST00000569924 CECR9P0C854 216 aa2.47□□□□□ -2.01
CNOT1-221ENST00000569924 RBMY1CP0DJD4 496 aa2.47□□□□□ -2.01
CNOT1-221ENST00000569924 PRPS1L1P21108 318 aa2.47□□□□□ -2.01
CNOT1-221ENST00000569924 BGNP21810 368 aa2.47□□□□□ -2.01
CNOT1-221ENST00000569924 IL2RGP31785 369 aa2.47□□□□□ -2.01
CNOT1-221ENST00000569924 SRP14P37108 136 aaKnown RBP2.47□□□□□ -2.01
CNOT1-221ENST00000569924 AQP2P41181 271 aa2.47□□□□□ -2.01
CNOT1-221ENST00000569924 CRATP43155 626 aa2.47□□□□□ -2.01
CNOT1-221ENST00000569924 EVX1P49640 407 aa2.47□□□□□ -2.01
CNOT1-221ENST00000569924 POLR2HP52434 150 aaKnown RBP2.47□□□□□ -2.01
CNOT1-221ENST00000569924 OR2B6P58173 313 aa2.47□□□□□ -2.01
CNOT1-221ENST00000569924 NANOS3P60323 173 aaKnown RBP2.47□□□□□ -2.01
CNOT1-221ENST00000569924 MAPK14Q16539 360 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms