RNA–Protein interactions for RNA: ENST00000569919.1

UBFD1-209, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 5

Gene UBFD1, Length 739 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-209ENST00000569919 CDX1P47902 265 aaPredicted RBP4.63□□□□□ -1.67
UBFD1-209ENST00000569919 DLX6P56179 175 aa4.63□□□□□ -1.67
UBFD1-209ENST00000569919 GRB2P62993 217 aaKnown RBP4.63□□□□□ -1.67
UBFD1-209ENST00000569919 PRDX4Q13162 271 aa4.63□□□□□ -1.67
UBFD1-209ENST00000569919 CYLC2Q14093 348 aaPredicted RBP4.63□□□□□ -1.67
UBFD1-209ENST00000569919 KIR2DS1Q14954 304 aa4.63□□□□□ -1.67
UBFD1-209ENST00000569919 PHLDA2Q53GA4 152 aa4.63□□□□□ -1.67
UBFD1-209ENST00000569919 CYBRD1Q53TN4 286 aa4.63□□□□□ -1.67
UBFD1-209ENST00000569919 FAM27D1Q5T7N8 215 aa4.63□□□□□ -1.67
UBFD1-209ENST00000569919 ERICH5Q6P6B1 374 aa4.63□□□□□ -1.67
UBFD1-209ENST00000569919 ZNF329Q86UD4 541 aa4.63□□□□□ -1.67
UBFD1-209ENST00000569919 ZDHHC21Q8IVQ6 265 aa4.63□□□□□ -1.67
UBFD1-209ENST00000569919 FAM219AQ8IW50 185 aa4.63□□□□□ -1.67
UBFD1-209ENST00000569919 THAP8Q8NA92 274 aa4.63□□□□□ -1.67
UBFD1-209ENST00000569919 OR2T12Q8NG77 320 aa4.63□□□□□ -1.67
UBFD1-209ENST00000569919 OR4M1Q8NGD0 313 aa4.63□□□□□ -1.67
UBFD1-209ENST00000569919 OR8U1Q8NH10 309 aa4.63□□□□□ -1.67
UBFD1-209ENST00000569919 OR5P3Q8WZ94 311 aa4.63□□□□□ -1.67
UBFD1-209ENST00000569919 PIGCQ92535 297 aa4.63□□□□□ -1.67
UBFD1-209ENST00000569919 RBMXL1Q96E39 390 aaKnown RBP4.63□□□□□ -1.67
UBFD1-209ENST00000569919 REEP6Q96HR9 211 aa4.63□□□□□ -1.67
UBFD1-209ENST00000569919 COPS4Q9BT78 406 aa4.63□□□□□ -1.67
UBFD1-209ENST00000569919 ANKRD19PQ9H560 264 aa4.63□□□□□ -1.67
UBFD1-209ENST00000569919 EDA2RQ9HAV5 297 aa4.63□□□□□ -1.67
UBFD1-209ENST00000569919 RPRD1BQ9NQG5 326 aaKnown RBP4.63□□□□□ -1.67
UBFD1-209ENST00000569919 CENPMQ9NSP4 180 aa4.63□□□□□ -1.67
UBFD1-209ENST00000569919 MRPL22Q9NWU5 206 aaKnown RBP4.63□□□□□ -1.67
UBFD1-209ENST00000569919 STAB2Q8WWQ8 2551 aa4.63□□□□□ -1.67
UBFD1-209ENST00000569919 EPPK1P58107 5090 aaKnown RBP4.63□□□□□ -1.67
UBFD1-209ENST00000569919 A0A1B0GUV1 79 aa4.62□□□□□ -1.67
UBFD1-209ENST00000569919 hCG_38984A0A1B0GV85 526 aa4.62□□□□□ -1.67
UBFD1-209ENST00000569919 FFAR1O14842 300 aa4.62□□□□□ -1.67
UBFD1-209ENST00000569919 MTRF1O75570 445 aaKnown RBP4.62□□□□□ -1.67
UBFD1-209ENST00000569919 SLC18A1P54219 525 aa4.62□□□□□ -1.67
UBFD1-209ENST00000569919 ACTA2P62736 377 aa4.62□□□□□ -1.67
UBFD1-209ENST00000569919 ACTG2P63267 376 aa4.62□□□□□ -1.67
UBFD1-209ENST00000569919 ACTC1P68032 377 aa4.62□□□□□ -1.67
UBFD1-209ENST00000569919 ACTA1P68133 377 aa4.62□□□□□ -1.67
UBFD1-209ENST00000569919 FGD3Q5JSP0 725 aa4.62□□□□□ -1.67
UBFD1-209ENST00000569919 NANOGP8Q6NSW7 305 aa4.62□□□□□ -1.67
UBFD1-209ENST00000569919 SMARCD3Q6STE5 483 aa4.62□□□□□ -1.67
UBFD1-209ENST00000569919 ACP7Q6ZNF0 438 aa4.62□□□□□ -1.67
UBFD1-209ENST00000569919 C18orf65Q6ZTR6 163 aa4.62□□□□□ -1.67
UBFD1-209ENST00000569919 DCXRQ7Z4W1 244 aa4.62□□□□□ -1.67
UBFD1-209ENST00000569919 DRAM1Q8N682 238 aa4.62□□□□□ -1.67
UBFD1-209ENST00000569919 CD177Q8N6Q3 437 aa4.62□□□□□ -1.67
UBFD1-209ENST00000569919 SLC24A4Q8NFF2 622 aa4.62□□□□□ -1.67
UBFD1-209ENST00000569919 DMBX1Q8NFW5 382 aa4.62□□□□□ -1.67
UBFD1-209ENST00000569919 OR4K13Q8NH42 304 aa4.62□□□□□ -1.67
UBFD1-209ENST00000569919 ITFG2Q969R8 447 aa4.62□□□□□ -1.67
UBFD1-209ENST00000569919 SLAMF6Q96DU3 332 aa4.62□□□□□ -1.67
UBFD1-209ENST00000569919 ST6GAL2Q96JF0 529 aa4.62□□□□□ -1.67
UBFD1-209ENST00000569919 DUX3Q96PT4 197 aa4.62□□□□□ -1.67
UBFD1-209ENST00000569919 INTS14Q96SY0 518 aa4.62□□□□□ -1.67
UBFD1-209ENST00000569919 TM2D3Q9BRN9 247 aa4.62□□□□□ -1.67
UBFD1-209ENST00000569919 GON7Q9BXV9 100 aa4.62□□□□□ -1.67
UBFD1-209ENST00000569919 OR51I2Q9H344 312 aa4.62□□□□□ -1.67
UBFD1-209ENST00000569919 RGCCQ9H4X1 137 aa4.62□□□□□ -1.67
UBFD1-209ENST00000569919 DCLRE1BQ9H816 532 aa4.62□□□□□ -1.67
UBFD1-209ENST00000569919 DPM3Q9P2X0 92 aa4.62□□□□□ -1.67
UBFD1-209ENST00000569919 DNAJB9Q9UBS3 223 aa4.62□□□□□ -1.67
UBFD1-209ENST00000569919 HHLA2Q9UM44 414 aa4.62□□□□□ -1.67
UBFD1-209ENST00000569919 SNX5Q9Y5X3 404 aa4.62□□□□□ -1.67
UBFD1-209ENST00000569919 DNAH9Q9NYC9 4486 aa4.62□□□□□ -1.67
UBFD1-209ENST00000569919 IGHV2-26A0A0B4J1V2 119 aa4.61□□□□□ -1.67
UBFD1-209ENST00000569919 SERPINE3A8MV23 424 aa4.61□□□□□ -1.67
UBFD1-209ENST00000569919 LEUTXA8MZ59 168 aa4.61□□□□□ -1.67
UBFD1-209ENST00000569919 ZNF732B4DXR9 585 aa4.61□□□□□ -1.67
UBFD1-209ENST00000569919 ZNF878C9JN71 531 aa4.61□□□□□ -1.67
UBFD1-209ENST00000569919 K7N7A8 449 aa4.61□□□□□ -1.67
UBFD1-209ENST00000569919 ZNF593O00488 134 aaPredicted RBP4.61□□□□□ -1.67
UBFD1-209ENST00000569919 BUB3O43684 328 aa4.61□□□□□ -1.67
UBFD1-209ENST00000569919 NPPAP01160 153 aa4.61□□□□□ -1.67
UBFD1-209ENST00000569919 IFNA6P05013 189 aa4.61□□□□□ -1.67
UBFD1-209ENST00000569919 HIST1H1CP16403 213 aaKnown RBP4.61□□□□□ -1.67
UBFD1-209ENST00000569919 ANOS1P23352 680 aa4.61□□□□□ -1.67
UBFD1-209ENST00000569919 CD24P25063 80 aa4.61□□□□□ -1.67
UBFD1-209ENST00000569919 HSD11B1P28845 292 aa4.61□□□□□ -1.67
UBFD1-209ENST00000569919 CEACAM3P40198 252 aa4.61□□□□□ -1.67
UBFD1-209ENST00000569919 MNDAP41218 407 aa4.61□□□□□ -1.67
UBFD1-209ENST00000569919 RPS27P42677 84 aaKnown RBP4.61□□□□□ -1.67
UBFD1-209ENST00000569919 CX3CR1P49238 355 aa4.61□□□□□ -1.67
UBFD1-209ENST00000569919 GPM6AP51674 278 aa4.61□□□□□ -1.67
UBFD1-209ENST00000569919 FXYD6P3P58550 94 aa4.61□□□□□ -1.67
UBFD1-209ENST00000569919 ERVFC1-1P60608 527 aa4.61□□□□□ -1.67
UBFD1-209ENST00000569919 GNG3P63215 75 aa4.61□□□□□ -1.67
UBFD1-209ENST00000569919 CBX1P83916 185 aa4.61□□□□□ -1.67
UBFD1-209ENST00000569919 MEF2CQ06413 473 aaPredicted RBP4.61□□□□□ -1.67
UBFD1-209ENST00000569919 SCN1BQ07699 218 aa4.61□□□□□ -1.67
UBFD1-209ENST00000569919 ZNF415Q09FC8 603 aa4.61□□□□□ -1.67
UBFD1-209ENST00000569919 EIF2B1Q14232 305 aaKnown RBP4.61□□□□□ -1.67
UBFD1-209ENST00000569919 SMIM21Q3B7S5 101 aa4.61□□□□□ -1.67
UBFD1-209ENST00000569919 LRRC23Q53EV4 343 aaPredicted RBP4.61□□□□□ -1.67
UBFD1-209ENST00000569919 KLHL12Q53G59 568 aa4.61□□□□□ -1.67
UBFD1-209ENST00000569919 TNFAIP8L3Q5GJ75 292 aa4.61□□□□□ -1.67
UBFD1-209ENST00000569919 TEX30Q5JUR7 227 aa4.61□□□□□ -1.67
UBFD1-209ENST00000569919 OR52W1Q6IF63 320 aa4.61□□□□□ -1.67
UBFD1-209ENST00000569919 CROCCP2Q86T23 111 aa4.61□□□□□ -1.67
UBFD1-209ENST00000569919 ZNF554Q86TJ5 538 aa4.61□□□□□ -1.67
UBFD1-209ENST00000569919 RTN4RL2Q86UN3 420 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms