RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 CCDC54Q8NEL0 328 aa9.45□□□□□ -0.9
CAPN3-220ENST00000569827 OR5M8Q8NGP6 311 aa9.45□□□□□ -0.9
CAPN3-220ENST00000569827 OR10X1Q8NGY0 326 aa9.45□□□□□ -0.9
CAPN3-220ENST00000569827 C10orf35Q96D05 121 aa9.45□□□□□ -0.9
CAPN3-220ENST00000569827 EAF1Q96JC9 268 aaPredicted RBP9.45□□□□□ -0.9
CAPN3-220ENST00000569827 HSPB9Q9BQS6 159 aa9.45□□□□□ -0.9
CAPN3-220ENST00000569827 IGHV1-3A0A0C4DH29 117 aa9.44□□□□□ -0.9
CAPN3-220ENST00000569827 J3QLW9 94 aa9.44□□□□□ -0.9
CAPN3-220ENST00000569827 GYG2O15488 501 aa9.44□□□□□ -0.9
CAPN3-220ENST00000569827 RAMP3O60896 148 aa9.44□□□□□ -0.9
CAPN3-220ENST00000569827 ZNF19P17023 458 aa9.44□□□□□ -0.9
CAPN3-220ENST00000569827 KISS1Q15726 138 aa9.44□□□□□ -0.9
CAPN3-220ENST00000569827 PNLIPRP3Q17RR3 467 aa9.44□□□□□ -0.9
CAPN3-220ENST00000569827 ZNF260Q3ZCT1 412 aa9.44□□□□□ -0.9
CAPN3-220ENST00000569827 CXorf66Q5JRM2 361 aaPredicted RBP9.44□□□□□ -0.9
CAPN3-220ENST00000569827 CASC10Q5T4H9 136 aa9.44□□□□□ -0.9
CAPN3-220ENST00000569827 RSBN1Q5VWQ0 802 aaPredicted RBP9.44□□□□□ -0.9
CAPN3-220ENST00000569827 TEX38Q6PEX7 206 aa9.44□□□□□ -0.9
CAPN3-220ENST00000569827 OVCH2Q7RTZ1 564 aa9.44□□□□□ -0.9
CAPN3-220ENST00000569827 OR8H3Q8N146 312 aa9.44□□□□□ -0.9
CAPN3-220ENST00000569827 Q8N9W7 124 aa9.44□□□□□ -0.9
CAPN3-220ENST00000569827 RNFT2Q96EX2 444 aa9.44□□□□□ -0.9
CAPN3-220ENST00000569827 OR5B12Q96R08 314 aa9.44□□□□□ -0.9
CAPN3-220ENST00000569827 FAM192AQ9GZU8 254 aa9.44□□□□□ -0.9
CAPN3-220ENST00000569827 ZCCHC4Q9H5U6 513 aa9.44□□□□□ -0.9
CAPN3-220ENST00000569827 PCDHB16Q9NRJ7 776 aa9.44□□□□□ -0.9
CAPN3-220ENST00000569827 OR4C45A6NMZ5 311 aa9.43□□□□□ -0.9
CAPN3-220ENST00000569827 NPIPB11E5RHQ5 1161 aa9.43□□□□□ -0.9
CAPN3-220ENST00000569827 C3orf84H3BNL1 204 aa9.43□□□□□ -0.9
CAPN3-220ENST00000569827 AP4M1O00189 453 aa9.43□□□□□ -0.9
CAPN3-220ENST00000569827 CCRL2O00421 344 aa9.43□□□□□ -0.9
CAPN3-220ENST00000569827 SLC31A2O15432 143 aa9.43□□□□□ -0.9
CAPN3-220ENST00000569827 MYF6P23409 242 aa9.43□□□□□ -0.9
CAPN3-220ENST00000569827 C21orf33P30042 268 aaPredicted RBP9.43□□□□□ -0.9
CAPN3-220ENST00000569827 RAB7AP51149 207 aa9.43□□□□□ -0.9
CAPN3-220ENST00000569827 ATP6AP1Q15904 470 aa9.43□□□□□ -0.9
CAPN3-220ENST00000569827 ASPHD1Q5U4P2 390 aa9.43□□□□□ -0.9
CAPN3-220ENST00000569827 ZNF691Q5VV52 312 aa9.43□□□□□ -0.9
CAPN3-220ENST00000569827 SATL1Q86VE3 508 aa9.43□□□□□ -0.9
CAPN3-220ENST00000569827 COMMD1Q8N668 190 aa9.43□□□□□ -0.9
CAPN3-220ENST00000569827 CHST4Q8NCG5 386 aa9.43□□□□□ -0.9
CAPN3-220ENST00000569827 OR51A2Q8NGJ7 313 aa9.43□□□□□ -0.9
CAPN3-220ENST00000569827 OR8U1Q8NH10 309 aa9.43□□□□□ -0.9
CAPN3-220ENST00000569827 MUC7Q8TAX7 377 aa9.43□□□□□ -0.9
CAPN3-220ENST00000569827 CNIH3Q8TBE1 160 aa9.43□□□□□ -0.9
CAPN3-220ENST00000569827 HAVCR2Q8TDQ0 301 aa9.43□□□□□ -0.9
CAPN3-220ENST00000569827 CCDC107Q8WV48 283 aa9.43□□□□□ -0.9
CAPN3-220ENST00000569827 SLC7A6OSQ96CW6 309 aaPredicted RBP9.43□□□□□ -0.9
CAPN3-220ENST00000569827 PELI1Q96FA3 418 aa9.43□□□□□ -0.9
CAPN3-220ENST00000569827 CYYR1Q96J86 154 aa9.43□□□□□ -0.9
CAPN3-220ENST00000569827 C4orf36Q96KX1 117 aa9.43□□□□□ -0.9
CAPN3-220ENST00000569827 GABARAPL1Q9H0R8 117 aa9.43□□□□□ -0.9
CAPN3-220ENST00000569827 GNB4Q9HAV0 340 aa9.43□□□□□ -0.9
CAPN3-220ENST00000569827 ZNF256Q9Y2P7 627 aaPredicted RBP9.43□□□□□ -0.9
CAPN3-220ENST00000569827 HYDINQ4G0P3 5121 aa9.42□□□□□ -0.9
CAPN3-220ENST00000569827 DAPL1A0PJW8 107 aa9.42□□□□□ -0.9
CAPN3-220ENST00000569827 SAC3D1A6NKF1 404 aa9.42□□□□□ -0.9
CAPN3-220ENST00000569827 GABRPO00591 440 aa9.42□□□□□ -0.9
CAPN3-220ENST00000569827 SLC16A6O15403 523 aa9.42□□□□□ -0.9
CAPN3-220ENST00000569827 HTR3BO95264 441 aa9.42□□□□□ -0.9
CAPN3-220ENST00000569827 ISG15P05161 165 aa9.42□□□□□ -0.9
CAPN3-220ENST00000569827 SLC2A2P11168 524 aaPredicted RBP9.42□□□□□ -0.9
CAPN3-220ENST00000569827 SLC6A1P30531 599 aa9.42□□□□□ -0.9
CAPN3-220ENST00000569827 MTNR1BP49286 362 aa9.42□□□□□ -0.9
CAPN3-220ENST00000569827 F2RL1P55085 397 aa9.42□□□□□ -0.9
CAPN3-220ENST00000569827 ALKBH1Q13686 389 aaKnown RBP9.42□□□□□ -0.9
CAPN3-220ENST00000569827 KIR2DS1Q14954 304 aa9.42□□□□□ -0.9
CAPN3-220ENST00000569827 SBSPONQ8IVN8 264 aa9.42□□□□□ -0.9
CAPN3-220ENST00000569827 SAXO1Q8IYX7 474 aa9.42□□□□□ -0.9
CAPN3-220ENST00000569827 Q8N6K4 173 aa9.42□□□□□ -0.9
CAPN3-220ENST00000569827 ZNF565Q8N9K5 539 aa9.42□□□□□ -0.9
CAPN3-220ENST00000569827 OR11H1Q8NG94 326 aa9.42□□□□□ -0.9
CAPN3-220ENST00000569827 TNFAIP8L1Q8WVP5 186 aa9.42□□□□□ -0.9
CAPN3-220ENST00000569827 RCHY1Q96PM5 261 aa9.42□□□□□ -0.9
CAPN3-220ENST00000569827 ABCG5Q9H222 651 aa9.42□□□□□ -0.9
CAPN3-220ENST00000569827 ISG20L2Q9H9L3 353 aaKnown RBP9.42□□□□□ -0.9
CAPN3-220ENST00000569827 E9PI62 339 aa9.41□□□□□ -0.9
CAPN3-220ENST00000569827 ATP8B1O43520 1251 aa9.41□□□□□ -0.9
CAPN3-220ENST00000569827 SULT1B1O43704 296 aa9.41□□□□□ -0.9
CAPN3-220ENST00000569827 CDRT1O95170 752 aa9.41□□□□□ -0.9
CAPN3-220ENST00000569827 MT-ND2P03891 347 aa9.41□□□□□ -0.9
CAPN3-220ENST00000569827 HOXB6P17509 224 aaKnown RBP9.41□□□□□ -0.9
CAPN3-220ENST00000569827 CFHR3Q02985 330 aa9.41□□□□□ -0.9
CAPN3-220ENST00000569827 ZNF816Q0VGE8 651 aaPredicted RBP9.41□□□□□ -0.9
CAPN3-220ENST00000569827 FOXE3Q13461 319 aa9.41□□□□□ -0.9
CAPN3-220ENST00000569827 EBI3Q14213 229 aa9.41□□□□□ -0.9
CAPN3-220ENST00000569827 DNAL1Q4LDG9 190 aa9.41□□□□□ -0.9
CAPN3-220ENST00000569827 ZFAND6Q6FIF0 208 aa9.41□□□□□ -0.9
CAPN3-220ENST00000569827 FDX2Q6P4F2 183 aa9.41□□□□□ -0.9
CAPN3-220ENST00000569827 TGIF2LXQ8IUE1 241 aa9.41□□□□□ -0.9
CAPN3-220ENST00000569827 ZDHHC13Q8IUH4 622 aa9.41□□□□□ -0.9
CAPN3-220ENST00000569827 IZUMO1Q8IYV9 350 aa9.41□□□□□ -0.9
CAPN3-220ENST00000569827 SUMF2Q8NBJ7 301 aa9.41□□□□□ -0.9
CAPN3-220ENST00000569827 TMEM104Q8NE00 496 aa9.41□□□□□ -0.9
CAPN3-220ENST00000569827 OR8J1Q8NGP2 316 aa9.41□□□□□ -0.9
CAPN3-220ENST00000569827 TSEN15Q8WW01 171 aaKnown RBP9.41□□□□□ -0.9
CAPN3-220ENST00000569827 S1PR3Q99500 378 aa9.41□□□□□ -0.9
CAPN3-220ENST00000569827 GPER1Q99527 375 aa9.41□□□□□ -0.9
CAPN3-220ENST00000569827 PDCD1LG2Q9BQ51 273 aa9.41□□□□□ -0.9
CAPN3-220ENST00000569827 GABARAPL3Q9BY60 117 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms