RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 ABCG5Q9H222 651 aa13.26□□□□□ -0.29
USB1-215ENST00000569252 RIMS4Q9H426 269 aaPredicted RBP13.26□□□□□ -0.29
USB1-215ENST00000569252 OR6C3Q9NZP0 311 aa13.26□□□□□ -0.29
USB1-215ENST00000569252 RCC2Q9P258 522 aaKnown RBP13.26□□□□□ -0.29
USB1-215ENST00000569252 KCNS2Q9ULS6 477 aa13.26□□□□□ -0.29
USB1-215ENST00000569252 POLR3KQ9Y2Y1 108 aaPredicted RBP13.26□□□□□ -0.29
USB1-215ENST00000569252 A0A0A6YYD4 124 aa13.25□□□□□ -0.29
USB1-215ENST00000569252 IGHV2-70DA0A0C4DH43 119 aa13.25□□□□□ -0.29
USB1-215ENST00000569252 KIR2DS1A0A191URI9 304 aa13.25□□□□□ -0.29
USB1-215ENST00000569252 A6NHS1 94 aa13.25□□□□□ -0.29
USB1-215ENST00000569252 CD5LO43866 347 aa13.25□□□□□ -0.29
USB1-215ENST00000569252 HPGDSO60760 199 aa13.25□□□□□ -0.29
USB1-215ENST00000569252 CD3GP09693 182 aa13.25□□□□□ -0.29
USB1-215ENST00000569252 CHATP28329 748 aa13.25□□□□□ -0.29
USB1-215ENST00000569252 S100A5P33763 92 aa13.25□□□□□ -0.29
USB1-215ENST00000569252 P2RX3P56373 397 aa13.25□□□□□ -0.29
USB1-215ENST00000569252 PLA2G7Q13093 441 aa13.25□□□□□ -0.29
USB1-215ENST00000569252 ARFRP1Q13795 201 aa13.25□□□□□ -0.29
USB1-215ENST00000569252 KRTAP24-1Q3LI83 254 aa13.25□□□□□ -0.29
USB1-215ENST00000569252 CDNFQ49AH0 187 aa13.25□□□□□ -0.29
USB1-215ENST00000569252 PECRQ9BY49 303 aa13.25□□□□□ -0.29
USB1-215ENST00000569252 RAB9BQ9NP90 201 aa13.25□□□□□ -0.29
USB1-215ENST00000569252 ONECUT1Q9UBC0 465 aa13.25□□□□□ -0.29
USB1-215ENST00000569252 TRAPPC2LQ9UL33 140 aa13.25□□□□□ -0.29
USB1-215ENST00000569252 TRAV18A0A075B6X5 111 aa13.24□□□□□ -0.29
USB1-215ENST00000569252 ODAMA1E959 279 aa13.24□□□□□ -0.29
USB1-215ENST00000569252 GNB3P16520 340 aa13.24□□□□□ -0.29
USB1-215ENST00000569252 GLIPR1P48060 266 aa13.24□□□□□ -0.29
USB1-215ENST00000569252 TMEM69Q5SWH9 247 aa13.24□□□□□ -0.29
USB1-215ENST00000569252 METTL11BQ5VVY1 283 aa13.24□□□□□ -0.29
USB1-215ENST00000569252 TMEM200BQ69YZ2 307 aa13.24□□□□□ -0.29
USB1-215ENST00000569252 SIGIRRQ6IA17 410 aa13.24□□□□□ -0.29
USB1-215ENST00000569252 IL17RELQ6ZVW7 336 aa13.24□□□□□ -0.29
USB1-215ENST00000569252 FGFRL1Q8N441 504 aa13.24□□□□□ -0.29
USB1-215ENST00000569252 SULT4A1Q9BR01 284 aa13.24□□□□□ -0.29
USB1-215ENST00000569252 MMP27Q9H306 513 aa13.24□□□□□ -0.29
USB1-215ENST00000569252 NCOR1P1Q9H4R4 102 aa13.24□□□□□ -0.29
USB1-215ENST00000569252 KCNIP1Q9NZI2 227 aa13.24□□□□□ -0.29
USB1-215ENST00000569252 UBE2J1Q9Y385 318 aaPredicted RBP13.24□□□□□ -0.29
USB1-215ENST00000569252 SERPINE3A8MV23 424 aa13.23□□□□□ -0.29
USB1-215ENST00000569252 J3QLI3 93 aa13.23□□□□□ -0.29
USB1-215ENST00000569252 RAB27BO00194 218 aa13.23□□□□□ -0.29
USB1-215ENST00000569252 XRCC3O43542 346 aa13.23□□□□□ -0.29
USB1-215ENST00000569252 GSTP1P09211 210 aaKnown RBP13.23□□□□□ -0.29
USB1-215ENST00000569252 ZNF16P17020 682 aaPredicted RBP13.23□□□□□ -0.29
USB1-215ENST00000569252 GZMHP20718 246 aa13.23□□□□□ -0.29
USB1-215ENST00000569252 TMEM50BP56557 158 aa13.23□□□□□ -0.29
USB1-215ENST00000569252 ARF6P62330 175 aa13.23□□□□□ -0.29
USB1-215ENST00000569252 PITPNAQ00169 270 aa13.23□□□□□ -0.29
USB1-215ENST00000569252 ZNF497Q6ZNH5 498 aa13.23□□□□□ -0.29
USB1-215ENST00000569252 TEX29Q8N6K0 151 aa13.23□□□□□ -0.29
USB1-215ENST00000569252 TPRX1Q8N7U7 411 aa13.23□□□□□ -0.29
USB1-215ENST00000569252 LY6G5BQ8NDX9 201 aa13.23□□□□□ -0.29
USB1-215ENST00000569252 C8orf46Q8TAG6 207 aa13.23□□□□□ -0.29
USB1-215ENST00000569252 SETD6Q8TBK2 473 aa13.23□□□□□ -0.29
USB1-215ENST00000569252 C15orf40Q8WUR7 153 aa13.23□□□□□ -0.29
USB1-215ENST00000569252 CCDC107Q8WV48 283 aa13.23□□□□□ -0.29
USB1-215ENST00000569252 CMSS1Q9BQ75 279 aaKnown RBP13.23□□□□□ -0.29
USB1-215ENST00000569252 SLIRPQ9GZT3 109 aaKnown RBP13.23□□□□□ -0.29
USB1-215ENST00000569252 GAL3ST2Q9H3Q3 398 aa13.23□□□□□ -0.29
USB1-215ENST00000569252 C7orf69Q9H7B7 122 aa13.23□□□□□ -0.29
USB1-215ENST00000569252 MMP26Q9NRE1 261 aa13.23□□□□□ -0.29
USB1-215ENST00000569252 C19orf12Q9NSK7 152 aa13.23□□□□□ -0.29
USB1-215ENST00000569252 ZNF581Q9P0T4 197 aa13.23□□□□□ -0.29
USB1-215ENST00000569252 KIF25Q9UIL4 384 aa13.23□□□□□ -0.29
USB1-215ENST00000569252 MRPS7Q9Y2R9 242 aaKnown RBP13.23□□□□□ -0.29
USB1-215ENST00000569252 INSIG2Q9Y5U4 225 aa13.23□□□□□ -0.29
USB1-215ENST00000569252 LINC00312Q9Y6C7 94 aa13.23□□□□□ -0.29
USB1-215ENST00000569252 YLPM1P49750 1951 aaKnown RBP13.22□□□□□ -0.29
USB1-215ENST00000569252 C22orf46C9J442 243 aa13.22□□□□□ -0.29
USB1-215ENST00000569252 MT-ND4P03905 459 aa13.22□□□□□ -0.29
USB1-215ENST00000569252 HIST1H1DP16402 221 aaKnown RBP13.22□□□□□ -0.29
USB1-215ENST00000569252 CDK2P24941 298 aa13.22□□□□□ -0.29
USB1-215ENST00000569252 GNG2P59768 71 aa13.22□□□□□ -0.29
USB1-215ENST00000569252 PAX5Q02548 391 aa13.22□□□□□ -0.29
USB1-215ENST00000569252 MOGAT2Q3SYC2 334 aa13.22□□□□□ -0.29
USB1-215ENST00000569252 PLAC9Q5JTB6 97 aa13.22□□□□□ -0.29
USB1-215ENST00000569252 C6orf183Q5T699 404 aa13.22□□□□□ -0.29
USB1-215ENST00000569252 RSBN1Q5VWQ0 802 aaPredicted RBP13.22□□□□□ -0.29
USB1-215ENST00000569252 TRAT1Q6PIZ9 186 aa13.22□□□□□ -0.29
USB1-215ENST00000569252 SLC25A38Q96DW6 304 aa13.22□□□□□ -0.29
USB1-215ENST00000569252 ZNF714Q96N38 554 aa13.22□□□□□ -0.29
USB1-215ENST00000569252 ZMAT3Q9HA38 289 aaKnown RBP13.22□□□□□ -0.29
USB1-215ENST00000569252 AK3Q9UIJ7 227 aa13.22□□□□□ -0.29
USB1-215ENST00000569252 MGAT4AQ9UM21 535 aa13.22□□□□□ -0.29
USB1-215ENST00000569252 AUP1Q9Y679 476 aa13.22□□□□□ -0.29
USB1-215ENST00000569252 A3GALT2U3KPV4 340 aa13.22□□□□□ -0.29
USB1-215ENST00000569252 POM121CA8CG34 1229 aa13.21□□□□□ -0.29
USB1-215ENST00000569252 A8MV72 311 aaPredicted RBP13.21□□□□□ -0.29
USB1-215ENST00000569252 CTDSP2O14595 271 aa13.21□□□□□ -0.29
USB1-215ENST00000569252 CLPXO76031 633 aa13.21□□□□□ -0.29
USB1-215ENST00000569252 TOX4O94842 621 aa13.21□□□□□ -0.29
USB1-215ENST00000569252 ZNF728P0DKX0 622 aa13.21□□□□□ -0.29
USB1-215ENST00000569252 ELK1P19419 428 aa13.21□□□□□ -0.29
USB1-215ENST00000569252 GLP1RP43220 463 aa13.21□□□□□ -0.29
USB1-215ENST00000569252 PNLIPRP3Q17RR3 467 aa13.21□□□□□ -0.29
USB1-215ENST00000569252 CHRFAM7AQ494W8 412 aa13.21□□□□□ -0.29
USB1-215ENST00000569252 FOXB2Q5VYV0 432 aa13.21□□□□□ -0.29
USB1-215ENST00000569252 OR4K15Q8NH41 348 aa13.21□□□□□ -0.29
USB1-215ENST00000569252 PLPPR1Q8TBJ4 325 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms