RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 OR4D9Q8NGE8 314 aa6.27□□□□□ -1.4
CNOT1-216ENST00000569240 SPSB4Q96A44 273 aa6.27□□□□□ -1.4
CNOT1-216ENST00000569240 TAAR3PQ9P1P4 343 aa6.27□□□□□ -1.4
CNOT1-216ENST00000569240 CD207Q9UJ71 328 aa6.27□□□□□ -1.4
CNOT1-216ENST00000569240 A0A1W2PPC1 479 aa6.27□□□□□ -1.41
CNOT1-216ENST00000569240 ONECUT2O95948 504 aa6.27□□□□□ -1.41
CNOT1-216ENST00000569240 OR4A8P0C604 315 aa6.27□□□□□ -1.41
CNOT1-216ENST00000569240 DRD1P21728 446 aa6.27□□□□□ -1.41
CNOT1-216ENST00000569240 SEC13P55735 322 aa6.27□□□□□ -1.41
CNOT1-216ENST00000569240 DLX1P56177 255 aa6.27□□□□□ -1.41
CNOT1-216ENST00000569240 SLC35B1P78383 322 aa6.27□□□□□ -1.41
CNOT1-216ENST00000569240 HES3Q5TGS1 186 aa6.27□□□□□ -1.41
CNOT1-216ENST00000569240 NPEPL1Q8NDH3 523 aa6.27□□□□□ -1.41
CNOT1-216ENST00000569240 OR13G1Q8NGZ3 307 aa6.27□□□□□ -1.41
CNOT1-216ENST00000569240 SLC25A38Q96DW6 304 aa6.27□□□□□ -1.41
CNOT1-216ENST00000569240 DERL1Q9BUN8 251 aa6.27□□□□□ -1.41
CNOT1-216ENST00000569240 SDF2L1Q9HCN8 221 aa6.27□□□□□ -1.41
CNOT1-216ENST00000569240 CACNG4Q9UBN1 327 aa6.27□□□□□ -1.41
CNOT1-216ENST00000569240 ERGP11308 486 aa6.27□□□□□ -1.41
CNOT1-216ENST00000569240 FAHP16930 419 aa6.27□□□□□ -1.41
CNOT1-216ENST00000569240 UBE2L3P68036 154 aaKnown RBP6.27□□□□□ -1.41
CNOT1-216ENST00000569240 DCDP81605 110 aaKnown RBP6.27□□□□□ -1.41
CNOT1-216ENST00000569240 TTC9CQ8N5M4 171 aa6.27□□□□□ -1.41
CNOT1-216ENST00000569240 TSPAN32Q96QS1 320 aa6.27□□□□□ -1.41
CNOT1-216ENST00000569240 RNF208Q9H0X6 261 aa6.27□□□□□ -1.41
CNOT1-216ENST00000569240 SPCS1Q9Y6A9 102 aa6.27□□□□□ -1.41
CNOT1-216ENST00000569240 FFAR1O14842 300 aa6.27□□□□□ -1.41
CNOT1-216ENST00000569240 PIAS2O75928 621 aa6.27□□□□□ -1.41
CNOT1-216ENST00000569240 FOLR3P41439 243 aa6.27□□□□□ -1.41
CNOT1-216ENST00000569240 SSR4P51571 173 aa6.27□□□□□ -1.41
CNOT1-216ENST00000569240 ZP1P60852 638 aa6.27□□□□□ -1.41
CNOT1-216ENST00000569240 AGERQ15109 404 aa6.27□□□□□ -1.41
CNOT1-216ENST00000569240 ZNF880Q6PDB4 577 aa6.27□□□□□ -1.41
CNOT1-216ENST00000569240 OR13C6PQ8NH95 151 aa6.27□□□□□ -1.41
CNOT1-216ENST00000569240 BAHD1Q8TBE0 780 aaPredicted RBP6.27□□□□□ -1.41
CNOT1-216ENST00000569240 SPPL3Q8TCT6 385 aa6.27□□□□□ -1.41
CNOT1-216ENST00000569240 KCNS1Q96KK3 526 aa6.27□□□□□ -1.41
CNOT1-216ENST00000569240 PGLYRP3Q96LB9 341 aa6.27□□□□□ -1.41
CNOT1-216ENST00000569240 OR2D2Q9H210 308 aa6.27□□□□□ -1.41
CNOT1-216ENST00000569240 TXNRD2Q9NNW7 524 aa6.27□□□□□ -1.41
CNOT1-216ENST00000569240 STARD5Q9NSY2 213 aa6.27□□□□□ -1.41
CNOT1-216ENST00000569240 P2RY2P41231 377 aa6.27□□□□□ -1.41
CNOT1-216ENST00000569240 MARCH3Q86UD3 253 aa6.27□□□□□ -1.41
CNOT1-216ENST00000569240 TBC1D26Q86UD7 250 aa6.27□□□□□ -1.41
CNOT1-216ENST00000569240 DUSP23Q9BVJ7 150 aa6.27□□□□□ -1.41
CNOT1-216ENST00000569240 USP54Q70EL1 1684 aa6.27□□□□□ -1.41
CNOT1-216ENST00000569240 LRP5O75197 1615 aa6.27□□□□□ -1.41
CNOT1-216ENST00000569240 ETHE1O95571 254 aa6.27□□□□□ -1.41
CNOT1-216ENST00000569240 PSMB5P28074 263 aa6.27□□□□□ -1.41
CNOT1-216ENST00000569240 CLDN18P56856 261 aa6.27□□□□□ -1.41
CNOT1-216ENST00000569240 C2orf68Q2NKX9 166 aa6.27□□□□□ -1.41
CNOT1-216ENST00000569240 TMEM25Q86YD3 366 aa6.27□□□□□ -1.41
CNOT1-216ENST00000569240 OR1F12Q8NHA8 337 aa6.27□□□□□ -1.41
CNOT1-216ENST00000569240 MUCL1Q96DR8 90 aa6.27□□□□□ -1.41
CNOT1-216ENST00000569240 HIST1H2BLQ99880 126 aa6.27□□□□□ -1.41
CNOT1-216ENST00000569240 SEBOXQ9HB31 216 aaPredicted RBP6.27□□□□□ -1.41
CNOT1-216ENST00000569240 FRRS1LQ9P0K9 344 aa6.27□□□□□ -1.41
CNOT1-216ENST00000569240 IGHV1-69-2A0A0G2JMI3 117 aa6.26□□□□□ -1.41
CNOT1-216ENST00000569240 MYADML2A6NDP7 307 aa6.26□□□□□ -1.41
CNOT1-216ENST00000569240 TNFRSF4P43489 277 aa6.26□□□□□ -1.41
CNOT1-216ENST00000569240 TIMM23BQ5SRD1 257 aa6.26□□□□□ -1.41
CNOT1-216ENST00000569240 TEPPQ6URK8 271 aa6.26□□□□□ -1.41
CNOT1-216ENST00000569240 THOC3Q96J01 351 aaKnown RBP6.26□□□□□ -1.41
CNOT1-216ENST00000569240 MRPL32Q9BYC8 188 aaKnown RBP6.26□□□□□ -1.41
CNOT1-216ENST00000569240 HIST1H2BKO60814 126 aa6.26□□□□□ -1.41
CNOT1-216ENST00000569240 HIST1H2BJP06899 126 aa6.26□□□□□ -1.41
CNOT1-216ENST00000569240 VSIG8P0DPA2 414 aa6.26□□□□□ -1.41
CNOT1-216ENST00000569240 HIST1H2BOP23527 126 aa6.26□□□□□ -1.41
CNOT1-216ENST00000569240 HIST1H2BBP33778 126 aa6.26□□□□□ -1.41
CNOT1-216ENST00000569240 HIST1H2BDP58876 126 aa6.26□□□□□ -1.41
CNOT1-216ENST00000569240 HIST1H2BCP62807 126 aa6.26□□□□□ -1.41
CNOT1-216ENST00000569240 HIST2H2BEQ16778 126 aa6.26□□□□□ -1.41
CNOT1-216ENST00000569240 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.26□□□□□ -1.41
CNOT1-216ENST00000569240 C1orf174Q8IYL3 243 aa6.26□□□□□ -1.41
CNOT1-216ENST00000569240 HIST1H2BHQ93079 126 aa6.26□□□□□ -1.41
CNOT1-216ENST00000569240 C14orf144Q96I85 54 aa6.26□□□□□ -1.41
CNOT1-216ENST00000569240 HIST1H2BNQ99877 126 aa6.26□□□□□ -1.41
CNOT1-216ENST00000569240 HIST1H2BMQ99879 126 aa6.26□□□□□ -1.41
CNOT1-216ENST00000569240 IL36BQ9NZH7 164 aa6.26□□□□□ -1.41
CNOT1-216ENST00000569240 FLRT3Q9NZU0 649 aa6.26□□□□□ -1.41
CNOT1-216ENST00000569240 A0A1B0GTL3 188 aa6.26□□□□□ -1.41
CNOT1-216ENST00000569240 MPZL1O95297 269 aa6.26□□□□□ -1.41
CNOT1-216ENST00000569240 IGHV2-70P01814 119 aa6.26□□□□□ -1.41
CNOT1-216ENST00000569240 OR2T6Q8NHC8 308 aa6.26□□□□□ -1.41
CNOT1-216ENST00000569240 NPIPB13A6NJU9 1138 aa6.26□□□□□ -1.41
CNOT1-216ENST00000569240 NPIPB4C9JG80 1138 aa6.26□□□□□ -1.41
CNOT1-216ENST00000569240 SLURP2P0DP57 97 aa6.26□□□□□ -1.41
CNOT1-216ENST00000569240 EDDM3BP56851 147 aa6.26□□□□□ -1.41
CNOT1-216ENST00000569240 TAF15Q92804 592 aaKnown RBP eCLIP6.26□□□□□ -1.41
CNOT1-216ENST00000569240 NPVFQ9HCQ7 196 aa6.26□□□□□ -1.41
CNOT1-216ENST00000569240 H0YL77 283 aa6.26□□□□□ -1.41
CNOT1-216ENST00000569240 SOCS7O14512 581 aa6.26□□□□□ -1.41
CNOT1-216ENST00000569240 MFAP2P55001 183 aa6.26□□□□□ -1.41
CNOT1-216ENST00000569240 TMEM50BP56557 158 aa6.26□□□□□ -1.41
CNOT1-216ENST00000569240 MRPS21P82921 87 aaKnown RBP6.26□□□□□ -1.41
CNOT1-216ENST00000569240 TMEM215Q68D42 235 aa6.26□□□□□ -1.41
CNOT1-216ENST00000569240 OR2M3Q8NG83 312 aa6.26□□□□□ -1.41
CNOT1-216ENST00000569240 PMS2P1A4D2B8 440 aa6.26□□□□□ -1.41
CNOT1-216ENST00000569240 ALG1L2C9J202 215 aa6.26□□□□□ -1.41
CNOT1-216ENST00000569240 F12P00748 615 aaPredicted RBP6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms