RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 KCNJ3P48549 501 aa6.66□□□□□ -1.34
SMG1-216ENST00000569122 GNG10P50151 68 aa6.66□□□□□ -1.34
SMG1-216ENST00000569122 SNU13P55769 128 aaKnown RBP6.66□□□□□ -1.34
SMG1-216ENST00000569122 RAB40BQ12829 278 aa6.66□□□□□ -1.34
SMG1-216ENST00000569122 PDZK1IP1Q13113 114 aa6.66□□□□□ -1.34
SMG1-216ENST00000569122 DIAPH2-AS1Q14236 149 aa6.66□□□□□ -1.34
SMG1-216ENST00000569122 LCN12Q6JVE5 192 aa6.66□□□□□ -1.34
SMG1-216ENST00000569122 CPOQ8IVL8 374 aa6.66□□□□□ -1.34
SMG1-216ENST00000569122 LINC00311Q8N616 119 aa6.66□□□□□ -1.34
SMG1-216ENST00000569122 YIPF7Q8N8F6 280 aa6.66□□□□□ -1.34
SMG1-216ENST00000569122 C8orf31Q8N9H6 132 aa6.66□□□□□ -1.34
SMG1-216ENST00000569122 CMTM5Q96DZ9 223 aa6.66□□□□□ -1.34
SMG1-216ENST00000569122 COQ2Q96H96 371 aa6.66□□□□□ -1.34
SMG1-216ENST00000569122 HSPB9Q9BQS6 159 aa6.66□□□□□ -1.34
SMG1-216ENST00000569122 CST11Q9H112 138 aa6.66□□□□□ -1.34
SMG1-216ENST00000569122 ZCCHC4Q9H5U6 513 aa6.66□□□□□ -1.34
SMG1-216ENST00000569122 FAM118AQ9NWS6 357 aa6.66□□□□□ -1.34
SMG1-216ENST00000569122 ING3Q9NXR8 418 aa6.66□□□□□ -1.34
SMG1-216ENST00000569122 CXorf65A6NEN9 183 aa6.65□□□□□ -1.34
SMG1-216ENST00000569122 HMGB1P1B2RPK0 211 aaPredicted RBP6.65□□□□□ -1.34
SMG1-216ENST00000569122 SLC33A1O00400 549 aaPredicted RBP6.65□□□□□ -1.34
SMG1-216ENST00000569122 MAGEB3O15480 346 aa6.65□□□□□ -1.34
SMG1-216ENST00000569122 RGS11O94810 467 aa6.65□□□□□ -1.34
SMG1-216ENST00000569122 IGHV3-7P01780 117 aa6.65□□□□□ -1.34
SMG1-216ENST00000569122 CSTBP04080 98 aaKnown RBP6.65□□□□□ -1.34
SMG1-216ENST00000569122 REG1BP48304 166 aa6.65□□□□□ -1.34
SMG1-216ENST00000569122 HCCSP53701 268 aa6.65□□□□□ -1.34
SMG1-216ENST00000569122 TMEM267Q0VDI3 215 aaPredicted RBP6.65□□□□□ -1.34
SMG1-216ENST00000569122 ATXN7L3Q14CW9 347 aaPredicted RBP6.65□□□□□ -1.34
SMG1-216ENST00000569122 TATDN3Q17R31 274 aa6.65□□□□□ -1.34
SMG1-216ENST00000569122 Q3ZCU0 254 aa6.65□□□□□ -1.34
SMG1-216ENST00000569122 ZNF322Q6U7Q0 402 aaPredicted RBP6.65□□□□□ -1.34
SMG1-216ENST00000569122 SAXO1Q8IYX7 474 aa6.65□□□□□ -1.34
SMG1-216ENST00000569122 Q8N402 240 aa6.65□□□□□ -1.34
SMG1-216ENST00000569122 MINDY2Q8NBR6 621 aa6.65□□□□□ -1.34
SMG1-216ENST00000569122 OR51T1Q8NGJ9 327 aa6.65□□□□□ -1.34
SMG1-216ENST00000569122 OR52M1Q8NGK5 317 aa6.65□□□□□ -1.34
SMG1-216ENST00000569122 RTN4IP1Q8WWV3 396 aaPredicted RBP6.65□□□□□ -1.34
SMG1-216ENST00000569122 LEAP2Q969E1 77 aa6.65□□□□□ -1.34
SMG1-216ENST00000569122 SPSB1Q96BD6 273 aa6.65□□□□□ -1.34
SMG1-216ENST00000569122 KCTD12Q96CX2 325 aaKnown RBP6.65□□□□□ -1.34
SMG1-216ENST00000569122 MBOAT4Q96T53 435 aa6.65□□□□□ -1.34
SMG1-216ENST00000569122 REEP1Q9H902 201 aa6.65□□□□□ -1.34
SMG1-216ENST00000569122 RAB9BQ9NP90 201 aa6.65□□□□□ -1.34
SMG1-216ENST00000569122 TAS2R1Q9NYW7 299 aa6.65□□□□□ -1.34
SMG1-216ENST00000569122 RNF150Q9ULK6 438 aa6.65□□□□□ -1.34
SMG1-216ENST00000569122 IGHV4OR15-8A0A075B7B6 117 aa6.64□□□□□ -1.35
SMG1-216ENST00000569122 A0A087WW49 117 aa6.64□□□□□ -1.35
SMG1-216ENST00000569122 SRSF10O75494 262 aaKnown RBP6.64□□□□□ -1.35
SMG1-216ENST00000569122 TPPPO94811 219 aa6.64□□□□□ -1.35
SMG1-216ENST00000569122 KDM4BO94953 1096 aa6.64□□□□□ -1.35
SMG1-216ENST00000569122 HLA-DRB1P01911 266 aa6.64□□□□□ -1.35
SMG1-216ENST00000569122 CALCBP10092 127 aa6.64□□□□□ -1.35
SMG1-216ENST00000569122 DBTP11182 482 aaKnown RBP6.64□□□□□ -1.35
SMG1-216ENST00000569122 HSD17B1P14061 328 aa6.64□□□□□ -1.35
SMG1-216ENST00000569122 FSTP19883 344 aa6.64□□□□□ -1.35
SMG1-216ENST00000569122 MNAT1P51948 309 aa6.64□□□□□ -1.35
SMG1-216ENST00000569122 F2RL1P55085 397 aa6.64□□□□□ -1.35
SMG1-216ENST00000569122 PAX5Q02548 391 aa6.64□□□□□ -1.35
SMG1-216ENST00000569122 GINS1Q14691 196 aa6.64□□□□□ -1.35
SMG1-216ENST00000569122 MMDQ15546 238 aa6.64□□□□□ -1.35
SMG1-216ENST00000569122 LTC4SQ16873 150 aa6.64□□□□□ -1.35
SMG1-216ENST00000569122 MOGAT2Q3SYC2 334 aa6.64□□□□□ -1.35
SMG1-216ENST00000569122 LIN54Q6MZP7 749 aa6.64□□□□□ -1.35
SMG1-216ENST00000569122 UTS2BQ765I0 119 aa6.64□□□□□ -1.35
SMG1-216ENST00000569122 IQCF1Q8N6M8 205 aa6.64□□□□□ -1.35
SMG1-216ENST00000569122 TMEM104Q8NE00 496 aa6.64□□□□□ -1.35
SMG1-216ENST00000569122 MRGPRDQ8TDS7 321 aa6.64□□□□□ -1.35
SMG1-216ENST00000569122 RGP1Q92546 391 aaPredicted RBP6.64□□□□□ -1.35
SMG1-216ENST00000569122 TMEM106AQ96A25 262 aa6.64□□□□□ -1.35
SMG1-216ENST00000569122 CNN2Q99439 309 aaKnown RBP6.64□□□□□ -1.35
SMG1-216ENST00000569122 ALX4Q9H161 411 aaPredicted RBP6.64□□□□□ -1.35
SMG1-216ENST00000569122 ZNF556Q9HAH1 456 aa6.64□□□□□ -1.35
SMG1-216ENST00000569122 RANGRFQ9HD47 186 aaPredicted RBP6.64□□□□□ -1.35
SMG1-216ENST00000569122 PARP11Q9NR21 331 aa6.64□□□□□ -1.35
SMG1-216ENST00000569122 TPSG1Q9NRR2 321 aa6.64□□□□□ -1.35
SMG1-216ENST00000569122 FOXA2Q9Y261 457 aaPredicted RBP6.64□□□□□ -1.35
SMG1-216ENST00000569122 SAMHD1Q9Y3Z3 626 aaKnown RBP6.64□□□□□ -1.35
SMG1-216ENST00000569122 ZNF670-ZNF695F2Z2N8 137 aa6.63□□□□□ -1.35
SMG1-216ENST00000569122 G3V318 75 aa6.63□□□□□ -1.35
SMG1-216ENST00000569122 ATP6V0E1O15342 81 aa6.63□□□□□ -1.35
SMG1-216ENST00000569122 APOL3O95236 402 aa6.63□□□□□ -1.35
SMG1-216ENST00000569122 KRT8P05787 483 aa6.63□□□□□ -1.35
SMG1-216ENST00000569122 ATF1P18846 271 aa6.63□□□□□ -1.35
SMG1-216ENST00000569122 SLC2A5P22732 501 aa6.63□□□□□ -1.35
SMG1-216ENST00000569122 CXCR4P61073 352 aa6.63□□□□□ -1.35
SMG1-216ENST00000569122 SPATS1Q496A3 300 aa6.63□□□□□ -1.35
SMG1-216ENST00000569122 PAN3Q58A45 887 aaKnown RBP6.63□□□□□ -1.35
SMG1-216ENST00000569122 UTF1Q5T230 341 aa6.63□□□□□ -1.35
SMG1-216ENST00000569122 OR2T5Q6IEZ7 315 aa6.63□□□□□ -1.35
SMG1-216ENST00000569122 FAM53AQ6NSI3 398 aaPredicted RBP6.63□□□□□ -1.35
SMG1-216ENST00000569122 Q6P435 159 aa6.63□□□□□ -1.35
SMG1-216ENST00000569122 CEMP1Q6PRD7 247 aaPredicted RBP6.63□□□□□ -1.35
SMG1-216ENST00000569122 LINC00322Q6ZN03 302 aaPredicted RBP6.63□□□□□ -1.35
SMG1-216ENST00000569122 HDXQ7Z353 690 aa6.63□□□□□ -1.35
SMG1-216ENST00000569122 LAX1Q8IWV1 398 aa6.63□□□□□ -1.35
SMG1-216ENST00000569122 OR10G2Q8NGC3 310 aa6.63□□□□□ -1.35
SMG1-216ENST00000569122 OR13A1Q8NGR1 328 aa6.63□□□□□ -1.35
SMG1-216ENST00000569122 OR2K2Q8NGT1 345 aa6.63□□□□□ -1.35
SMG1-216ENST00000569122 OR2T29Q8NH02 315 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms