RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 CRIPAKQ8N1N5 446 aa9.5□□□□□ -0.89
PALB2-206ENST00000568219 ST8SIA1Q92185 356 aa9.5□□□□□ -0.89
PALB2-206ENST00000568219 NINJ1Q92982 152 aa9.5□□□□□ -0.89
PALB2-206ENST00000568219 RAB24Q969Q5 203 aa9.5□□□□□ -0.89
PALB2-206ENST00000568219 TOX2Q96NM4 488 aa9.5□□□□□ -0.89
PALB2-206ENST00000568219 RBKSQ9H477 322 aa9.5□□□□□ -0.89
PALB2-206ENST00000568219 PRDM13Q9H4Q3 707 aa9.5□□□□□ -0.89
PALB2-206ENST00000568219 Q9N2K0 584 aa9.5□□□□□ -0.89
PALB2-206ENST00000568219 R4GN57 208 aa9.5□□□□□ -0.89
PALB2-206ENST00000568219 SHISA7A6NL88 538 aa9.49□□□□□ -0.89
PALB2-206ENST00000568219 C9J4A7 227 aa9.49□□□□□ -0.89
PALB2-206ENST00000568219 POU2F2P09086 479 aa9.49□□□□□ -0.89
PALB2-206ENST00000568219 BTNL3Q6UXE8 466 aa9.49□□□□□ -0.89
PALB2-206ENST00000568219 TMEM183AQ8IXX5 376 aa9.49□□□□□ -0.89
PALB2-206ENST00000568219 SIGLECL1Q8N7X8 197 aa9.49□□□□□ -0.89
PALB2-206ENST00000568219 BOD1Q96IK1 185 aa9.49□□□□□ -0.89
PALB2-206ENST00000568219 KCNK17Q96T54 332 aa9.49□□□□□ -0.89
PALB2-206ENST00000568219 DCAF16Q9NXF7 216 aa9.49□□□□□ -0.89
PALB2-206ENST00000568219 A0A096LPE4 126 aa9.49□□□□□ -0.89
PALB2-206ENST00000568219 A0A1W2PPZ6 126 aa9.49□□□□□ -0.89
PALB2-206ENST00000568219 C20orf202A1L168 122 aa9.49□□□□□ -0.89
PALB2-206ENST00000568219 B4DEV8 164 aa9.49□□□□□ -0.89
PALB2-206ENST00000568219 DHHO43323 396 aa9.49□□□□□ -0.89
PALB2-206ENST00000568219 DUX1O43812 170 aa9.49□□□□□ -0.89
PALB2-206ENST00000568219 PAGE4O60829 102 aa9.49□□□□□ -0.89
PALB2-206ENST00000568219 AMBPP02760 352 aa9.49□□□□□ -0.89
PALB2-206ENST00000568219 CCL2P13500 99 aa9.49□□□□□ -0.89
PALB2-206ENST00000568219 CAPZBP47756 277 aa9.49□□□□□ -0.89
PALB2-206ENST00000568219 ICAM4Q14773 271 aa9.49□□□□□ -0.89
PALB2-206ENST00000568219 C11orf42Q8N5U0 333 aa9.49□□□□□ -0.89
PALB2-206ENST00000568219 ZNF439Q8NDP4 499 aa9.49□□□□□ -0.89
PALB2-206ENST00000568219 MRPL30Q8TCC3 161 aaKnown RBP9.49□□□□□ -0.89
PALB2-206ENST00000568219 ZNF581Q9P0T4 197 aa9.49□□□□□ -0.89
PALB2-206ENST00000568219 NAT8Q9UHE5 227 aa9.49□□□□□ -0.89
PALB2-206ENST00000568219 VAX2Q9UIW0 290 aa9.49□□□□□ -0.89
PALB2-206ENST00000568219 ABCA1O95477 2261 aa9.49□□□□□ -0.89
PALB2-206ENST00000568219 KIAA1324LA8MWY0 1029 aaPredicted RBP9.49□□□□□ -0.89
PALB2-206ENST00000568219 MGST1P10620 155 aaKnown RBP9.49□□□□□ -0.89
PALB2-206ENST00000568219 TMEM68Q96MH6 324 aa9.49□□□□□ -0.89
PALB2-206ENST00000568219 OXGR1Q96P68 337 aa9.49□□□□□ -0.89
PALB2-206ENST00000568219 UNC80Q8N2C7 3258 aa9.49□□□□□ -0.89
PALB2-206ENST00000568219 IGKV1-9A0A0C4DH69 117 aa9.48□□□□□ -0.89
PALB2-206ENST00000568219 C5orf63A6NC05 138 aa9.48□□□□□ -0.89
PALB2-206ENST00000568219 LIPT2A6NK58 231 aa9.48□□□□□ -0.89
PALB2-206ENST00000568219 ZFAND5O76080 213 aa9.48□□□□□ -0.89
PALB2-206ENST00000568219 OR4A8P0C604 315 aa9.48□□□□□ -0.89
PALB2-206ENST00000568219 VDAC1P21796 283 aa9.48□□□□□ -0.89
PALB2-206ENST00000568219 HGFACQ04756 655 aa9.48□□□□□ -0.89
PALB2-206ENST00000568219 ACOT6Q3I5F7 207 aaPredicted RBP9.48□□□□□ -0.89
PALB2-206ENST00000568219 AAED1Q7RTV5 226 aa9.48□□□□□ -0.89
PALB2-206ENST00000568219 VASH2Q86V25 355 aa9.48□□□□□ -0.89
PALB2-206ENST00000568219 CMTM2Q8TAZ6 248 aa9.48□□□□□ -0.89
PALB2-206ENST00000568219 PPP1CBP62140 327 aa9.48□□□□□ -0.89
PALB2-206ENST00000568219 SUMO1P63165 101 aaKnown RBP9.48□□□□□ -0.89
PALB2-206ENST00000568219 RPP30P78346 268 aaKnown RBP9.48□□□□□ -0.89
PALB2-206ENST00000568219 SMAD4Q13485 552 aaKnown RBP9.48□□□□□ -0.89
PALB2-206ENST00000568219 LBHQ53QV2 105 aaPredicted RBP9.48□□□□□ -0.89
PALB2-206ENST00000568219 ZNF468Q5VIY5 522 aaPredicted RBP9.48□□□□□ -0.89
PALB2-206ENST00000568219 ADPRHL1Q8NDY3 354 aa9.48□□□□□ -0.89
PALB2-206ENST00000568219 EGLN1Q9GZT9 426 aa9.48□□□□□ -0.89
PALB2-206ENST00000568219 TRDCB7Z8K6 153 aa9.48□□□□□ -0.89
PALB2-206ENST00000568219 PDCD6O75340 191 aa9.48□□□□□ -0.89
PALB2-206ENST00000568219 DTYMKP23919 212 aa9.48□□□□□ -0.89
PALB2-206ENST00000568219 MESP1Q9BRJ9 268 aa9.48□□□□□ -0.89
PALB2-206ENST00000568219 NAGKQ9UJ70 344 aa9.48□□□□□ -0.89
PALB2-206ENST00000568219 ARHGAP21Q5T5U3 1957 aa9.48□□□□□ -0.89
PALB2-206ENST00000568219 LRRC3CA6NJW4 275 aa9.48□□□□□ -0.89
PALB2-206ENST00000568219 A8MXE2 369 aa9.48□□□□□ -0.89
PALB2-206ENST00000568219 K7N7A8 449 aa9.48□□□□□ -0.89
PALB2-206ENST00000568219 PPIHO43447 177 aaKnown RBP9.48□□□□□ -0.89
PALB2-206ENST00000568219 CD55P08174 381 aa9.48□□□□□ -0.89
PALB2-206ENST00000568219 SCTP09683 121 aa9.48□□□□□ -0.89
PALB2-206ENST00000568219 FGF5P12034 268 aa9.48□□□□□ -0.89
PALB2-206ENST00000568219 IGFBP4P22692 258 aa9.48□□□□□ -0.89
PALB2-206ENST00000568219 MSX1P28360 303 aa9.48□□□□□ -0.89
PALB2-206ENST00000568219 GPM6AP51674 278 aa9.48□□□□□ -0.89
PALB2-206ENST00000568219 CNN1P51911 297 aaKnown RBP9.48□□□□□ -0.89
PALB2-206ENST00000568219 EDDM3BP56851 147 aa9.48□□□□□ -0.89
PALB2-206ENST00000568219 SLC35B1P78383 322 aa9.48□□□□□ -0.89
PALB2-206ENST00000568219 JOSD1Q15040 202 aaPredicted RBP9.48□□□□□ -0.89
PALB2-206ENST00000568219 PLXNA3P51805 1871 aa9.47□□□□□ -0.89
PALB2-206ENST00000568219 CDS2O95674 445 aa9.47□□□□□ -0.89
PALB2-206ENST00000568219 GZMBP10144 247 aa9.47□□□□□ -0.89
PALB2-206ENST00000568219 RAB4AP20338 218 aa9.47□□□□□ -0.89
PALB2-206ENST00000568219 THBS3P49746 956 aa9.47□□□□□ -0.89
PALB2-206ENST00000568219 GNG10P50151 68 aa9.47□□□□□ -0.89
PALB2-206ENST00000568219 CD81P60033 236 aa9.47□□□□□ -0.89
PALB2-206ENST00000568219 NUTF2P61970 127 aaKnown RBP9.47□□□□□ -0.89
PALB2-206ENST00000568219 ZNF816Q0VGE8 651 aaPredicted RBP9.47□□□□□ -0.89
PALB2-206ENST00000568219 COTL1Q14019 142 aa9.47□□□□□ -0.89
PALB2-206ENST00000568219 FFAR4Q5NUL3 377 aa9.47□□□□□ -0.89
PALB2-206ENST00000568219 YRDCQ86U90 279 aaKnown RBP9.47□□□□□ -0.89
PALB2-206ENST00000568219 HSPB9Q9BQS6 159 aa9.47□□□□□ -0.89
PALB2-206ENST00000568219 SMDT1Q9H4I9 107 aa9.47□□□□□ -0.89
PALB2-206ENST00000568219 SIRPB1O00241 398 aa9.47□□□□□ -0.89
PALB2-206ENST00000568219 CSRP1P21291 193 aaKnown RBP9.47□□□□□ -0.89
PALB2-206ENST00000568219 S100A7P31151 101 aa9.47□□□□□ -0.89
PALB2-206ENST00000568219 MDH2P40926 338 aaKnown RBP9.47□□□□□ -0.89
PALB2-206ENST00000568219 IL24Q13007 206 aa9.47□□□□□ -0.89
PALB2-206ENST00000568219 Q6ZN92 141 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms