RNA–Protein interactions for RNA: ENST00000568034.1

COMMD4-222, Transcript of COMM domain containing 4, human

TSL 5

Gene COMMD4, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COMMD4-222	ENST00000568034	FOXB2	Q5VYV0	432 aa		14.77	□□□□□ -0.05
COMMD4-222	ENST00000568034		Q6ZPA2	131 aa		14.77	□□□□□ -0.05
COMMD4-222	ENST00000568034	IL17REL	Q6ZVW7	336 aa		14.77	□□□□□ -0.05
COMMD4-222	ENST00000568034	OR13A1	Q8NGR1	328 aa		14.77	□□□□□ -0.05
COMMD4-222	ENST00000568034	OR10R2	Q8NGX6	335 aa		14.77	□□□□□ -0.05
COMMD4-222	ENST00000568034	NEK7	Q8TDX7	302 aa		14.77	□□□□□ -0.05
COMMD4-222	ENST00000568034	UPRT	Q96BW1	309 aa		14.77	□□□□□ -0.05
COMMD4-222	ENST00000568034	FAAP24	Q9BTP7	215 aa		14.77	□□□□□ -0.05
COMMD4-222	ENST00000568034	PECR	Q9BY49	303 aa		14.77	□□□□□ -0.05
COMMD4-222	ENST00000568034	MEIKIN	A0A087WXM9	373 aa		14.76	□□□□□ -0.05
COMMD4-222	ENST00000568034	SMIM31	A0A1B0GVY4	71 aa		14.76	□□□□□ -0.05
COMMD4-222	ENST00000568034	TMEM30CP	A0ZSE6	113 aa		14.76	□□□□□ -0.05
COMMD4-222	ENST00000568034	FUOM	A2VDF0	154 aa		14.76	□□□□□ -0.05
COMMD4-222	ENST00000568034	DPPA5	A6NC42	116 aa		14.76	□□□□□ -0.05
COMMD4-222	ENST00000568034	C17orf98	A8MV24	154 aa		14.76	□□□□□ -0.05
COMMD4-222	ENST00000568034	ZNF701	M0R085	212 aa	Predicted RBP	14.76	□□□□□ -0.05
COMMD4-222	ENST00000568034	MFNG	O00587	321 aa		14.76	□□□□□ -0.05
COMMD4-222	ENST00000568034	MT-ND4	P03905	459 aa		14.76	□□□□□ -0.05
COMMD4-222	ENST00000568034	ZNF182	P17025	639 aa	Predicted RBP	14.76	□□□□□ -0.05
COMMD4-222	ENST00000568034	ERVFRD-1	P60508	538 aa		14.76	□□□□□ -0.05
COMMD4-222	ENST00000568034	KLF17	Q5JT82	389 aa	Predicted RBP	14.76	□□□□□ -0.05
COMMD4-222	ENST00000568034	OLFML2A	Q68BL7	652 aa		14.76	□□□□□ -0.05
COMMD4-222	ENST00000568034	TNFRSF14	Q92956	283 aa		14.76	□□□□□ -0.05
COMMD4-222	ENST00000568034	ATG5	Q9H1Y0	275 aa		14.76	□□□□□ -0.05
COMMD4-222	ENST00000568034	UNKL	Q9H9P5	680 aa	Known RBP	14.76	□□□□□ -0.05
COMMD4-222	ENST00000568034	CCDC59	Q9P031	241 aa	Known RBP	14.76	□□□□□ -0.05
COMMD4-222	ENST00000568034	RSL24D1	Q9UHA3	163 aa	Known RBP	14.76	□□□□□ -0.05
COMMD4-222	ENST00000568034	UBE2J1	Q9Y385	318 aa	Predicted RBP	14.76	□□□□□ -0.05
COMMD4-222	ENST00000568034	TRAV39	A0A0B4J263	110 aa		14.75	□□□□□ -0.05
COMMD4-222	ENST00000568034	METTL21EP	A6NDL7	271 aa		14.75	□□□□□ -0.05
COMMD4-222	ENST00000568034	CCDC160	A6NGH7	325 aa		14.75	□□□□□ -0.05
COMMD4-222	ENST00000568034	CA11	O75493	328 aa		14.75	□□□□□ -0.05
COMMD4-222	ENST00000568034	TOX4	O94842	621 aa		14.75	□□□□□ -0.05
COMMD4-222	ENST00000568034	ZNF728	P0DKX0	622 aa		14.75	□□□□□ -0.05
COMMD4-222	ENST00000568034	PRB3	Q04118	309 aa	Predicted RBP	14.75	□□□□□ -0.05
COMMD4-222	ENST00000568034	FAM189A2	Q15884	450 aa		14.75	□□□□□ -0.05
COMMD4-222	ENST00000568034	C17orf58	Q2M2W7	97 aa		14.75	□□□□□ -0.05
COMMD4-222	ENST00000568034	METTL11B	Q5VVY1	283 aa		14.75	□□□□□ -0.05
COMMD4-222	ENST00000568034	C1orf122	Q6ZSJ8	110 aa		14.75	□□□□□ -0.05
COMMD4-222	ENST00000568034		Q6ZTK2	550 aa		14.75	□□□□□ -0.05
COMMD4-222	ENST00000568034	VMO1	Q7Z5L0	202 aa		14.75	□□□□□ -0.05
COMMD4-222	ENST00000568034	CMTM4	Q8IZR5	234 aa		14.75	□□□□□ -0.05
COMMD4-222	ENST00000568034	MRPL30	Q8TCC3	161 aa	Known RBP	14.75	□□□□□ -0.05
COMMD4-222	ENST00000568034	RAB3C	Q96E17	227 aa		14.75	□□□□□ -0.05
COMMD4-222	ENST00000568034	ZNF714	Q96N38	554 aa		14.75	□□□□□ -0.05
COMMD4-222	ENST00000568034	PCGF1	Q9BSM1	259 aa		14.75	□□□□□ -0.05
COMMD4-222	ENST00000568034	ABCG5	Q9H222	651 aa		14.75	□□□□□ -0.05
COMMD4-222	ENST00000568034	SIRT7	Q9NRC8	400 aa		14.75	□□□□□ -0.05
COMMD4-222	ENST00000568034	PLEKHJ1	Q9NW61	149 aa		14.75	□□□□□ -0.05
COMMD4-222	ENST00000568034	OR6C3	Q9NZP0	311 aa		14.75	□□□□□ -0.05
COMMD4-222	ENST00000568034	AK3	Q9UIJ7	227 aa		14.75	□□□□□ -0.05
COMMD4-222	ENST00000568034	TRGV10	A0A0A0MS01	117 aa		14.74	□□□□□ -0.05
COMMD4-222	ENST00000568034	MMP23A	O75900	390 aa		14.74	□□□□□ -0.05
COMMD4-222	ENST00000568034	NAPSA	O96009	420 aa		14.74	□□□□□ -0.05
COMMD4-222	ENST00000568034	HIST1H1D	P16402	221 aa	Known RBP	14.74	□□□□□ -0.05
COMMD4-222	ENST00000568034	GNB3	P16520	340 aa		14.74	□□□□□ -0.05
COMMD4-222	ENST00000568034	GLP1R	P43220	463 aa		14.74	□□□□□ -0.05
COMMD4-222	ENST00000568034	HCP5	Q6MZN7	132 aa		14.74	□□□□□ -0.05
COMMD4-222	ENST00000568034	SAMD12	Q8N8I0	201 aa		14.74	□□□□□ -0.05
COMMD4-222	ENST00000568034	MRGPRD	Q8TDS7	321 aa		14.74	□□□□□ -0.05
COMMD4-222	ENST00000568034	ACOT12	Q8WYK0	555 aa		14.74	□□□□□ -0.05
COMMD4-222	ENST00000568034	HDHD3	Q9BSH5	251 aa	Predicted RBP	14.74	□□□□□ -0.05
COMMD4-222	ENST00000568034	TAS2R3	Q9NYW6	316 aa		14.74	□□□□□ -0.05
COMMD4-222	ENST00000568034	COMMD3	Q9UBI1	195 aa		14.74	□□□□□ -0.05
COMMD4-222	ENST00000568034	NAV3	Q8IVL0	2385 aa		14.73	□□□□□ -0.05
COMMD4-222	ENST00000568034		A0A1W2PPH5	198 aa		14.73	□□□□□ -0.05
COMMD4-222	ENST00000568034	RBP4	P02753	201 aa		14.73	□□□□□ -0.05
COMMD4-222	ENST00000568034	EIF4E	P06730	217 aa	Known RBP	14.73	□□□□□ -0.05
COMMD4-222	ENST00000568034	IGHV4-38-2	P0DP08	117 aa		14.73	□□□□□ -0.05
COMMD4-222	ENST00000568034	HOXB4	P17483	251 aa	Predicted RBP	14.73	□□□□□ -0.05
COMMD4-222	ENST00000568034	PRTN3	P24158	256 aa		14.73	□□□□□ -0.05
COMMD4-222	ENST00000568034	GDNF	P39905	211 aa		14.73	□□□□□ -0.05
COMMD4-222	ENST00000568034	UBE2NL	Q5JXB2	153 aa		14.73	□□□□□ -0.05
COMMD4-222	ENST00000568034	ZNF880	Q6PDB4	577 aa		14.73	□□□□□ -0.05
COMMD4-222	ENST00000568034	TRAPPC6B	Q86SZ2	158 aa		14.73	□□□□□ -0.05
COMMD4-222	ENST00000568034	OR4K15	Q8NH41	348 aa		14.73	□□□□□ -0.05
COMMD4-222	ENST00000568034	CCDC107	Q8WV48	283 aa		14.73	□□□□□ -0.05
COMMD4-222	ENST00000568034	AP3S1	Q92572	193 aa		14.73	□□□□□ -0.05
COMMD4-222	ENST00000568034	SLIRP	Q9GZT3	109 aa	Known RBP	14.73	□□□□□ -0.05
COMMD4-222	ENST00000568034	METTL8	Q9H825	291 aa	Known RBP	14.73	□□□□□ -0.05
COMMD4-222	ENST00000568034	LINC00574	Q9H8X3	128 aa		14.73	□□□□□ -0.05
COMMD4-222	ENST00000568034	ZMAT3	Q9HA38	289 aa	Known RBP	14.73	□□□□□ -0.05
COMMD4-222	ENST00000568034	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	14.73	□□□□□ -0.05
COMMD4-222	ENST00000568034	MBNL3	Q9NUK0	354 aa	Known RBP	14.73	□□□□□ -0.05
COMMD4-222	ENST00000568034	ELF5	Q9UKW6	265 aa	Predicted RBP	14.73	□□□□□ -0.05
COMMD4-222	ENST00000568034	TRBV6-6	A0A0A6YYG2	114 aa		14.72	□□□□□ -0.05
COMMD4-222	ENST00000568034	TRAV40	A0A0B4J280	105 aa		14.72	□□□□□ -0.05
COMMD4-222	ENST00000568034	ZNF729	A6NN14	1252 aa	Predicted RBP	14.72	□□□□□ -0.05
COMMD4-222	ENST00000568034	NPIPB11	E5RHQ5	1161 aa		14.72	□□□□□ -0.05
COMMD4-222	ENST00000568034	RNASEK-C17orf49	H0YIS7	233 aa		14.72	□□□□□ -0.05
COMMD4-222	ENST00000568034	C15orf65	H3BRN8	121 aa		14.72	□□□□□ -0.05
COMMD4-222	ENST00000568034	HPGDS	O60760	199 aa		14.72	□□□□□ -0.05
COMMD4-222	ENST00000568034	SCGN	O76038	276 aa		14.72	□□□□□ -0.05
COMMD4-222	ENST00000568034	SSTR5	P35346	364 aa		14.72	□□□□□ -0.05
COMMD4-222	ENST00000568034	KLRD1	Q13241	179 aa		14.72	□□□□□ -0.05
COMMD4-222	ENST00000568034	ZNF260	Q3ZCT1	412 aa		14.72	□□□□□ -0.05
COMMD4-222	ENST00000568034	BAIAP2L2	Q6UXY1	529 aa		14.72	□□□□□ -0.05
COMMD4-222	ENST00000568034	CALY	Q9NYX4	217 aa		14.72	□□□□□ -0.05
COMMD4-222	ENST00000568034		A0A0A6YYH2	397 aa		14.71	□□□□□ -0.05
COMMD4-222	ENST00000568034	CENPVL3	A0A0U1RRI6	287 aa		14.71	□□□□□ -0.05

Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms