RNA–Protein interactions for RNA: ENST00000567944.1

HERPUD1-212, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 435 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-212ENST00000567944 ZNF429Q86V71 674 aa2.34□□□□□ -2.03
HERPUD1-212ENST00000567944 UNC93AQ86WB7 457 aa2.34□□□□□ -2.03
HERPUD1-212ENST00000567944 RAB43Q86YS6 212 aa2.34□□□□□ -2.03
HERPUD1-212ENST00000567944 CALHM1Q8IU99 346 aa2.34□□□□□ -2.03
HERPUD1-212ENST00000567944 FUNDC1Q8IVP5 155 aa2.34□□□□□ -2.03
HERPUD1-212ENST00000567944 HS3ST5Q8IZT8 346 aa2.34□□□□□ -2.03
HERPUD1-212ENST00000567944 PGAM4Q8N0Y7 254 aa2.34□□□□□ -2.03
HERPUD1-212ENST00000567944 LRRC75A-AS1Q8N1F1 130 aa2.34□□□□□ -2.03
HERPUD1-212ENST00000567944 SVBPQ8N300 66 aa2.34□□□□□ -2.03
HERPUD1-212ENST00000567944 MDS2Q8NDY4 140 aa2.34□□□□□ -2.03
HERPUD1-212ENST00000567944 OR11H1Q8NG94 326 aa2.34□□□□□ -2.03
HERPUD1-212ENST00000567944 OR51S1Q8NGJ8 323 aa2.34□□□□□ -2.03
HERPUD1-212ENST00000567944 OR4A15Q8NGL6 344 aa2.34□□□□□ -2.03
HERPUD1-212ENST00000567944 OR4D5Q8NGN0 318 aa2.34□□□□□ -2.03
HERPUD1-212ENST00000567944 OR11H2Q8NH07 326 aa2.34□□□□□ -2.03
HERPUD1-212ENST00000567944 OR8U1Q8NH10 309 aa2.34□□□□□ -2.03
HERPUD1-212ENST00000567944 OR5AK3PQ8NH89 298 aa2.34□□□□□ -2.03
HERPUD1-212ENST00000567944 MARCH1Q8TCQ1 289 aa2.34□□□□□ -2.03
HERPUD1-212ENST00000567944 DCAKDQ8WVC6 231 aa2.34□□□□□ -2.03
HERPUD1-212ENST00000567944 DEDD2Q8WXF8 326 aa2.34□□□□□ -2.03
HERPUD1-212ENST00000567944 RGP1Q92546 391 aaPredicted RBP2.34□□□□□ -2.03
HERPUD1-212ENST00000567944 ISOC1Q96CN7 298 aa2.34□□□□□ -2.03
HERPUD1-212ENST00000567944 BTF3L4Q96K17 158 aa2.34□□□□□ -2.03
HERPUD1-212ENST00000567944 PANX1Q96RD7 426 aa2.34□□□□□ -2.03
HERPUD1-212ENST00000567944 KCNA7Q96RP8 456 aa2.34□□□□□ -2.03
HERPUD1-212ENST00000567944 FMO2Q99518 471 aa2.34□□□□□ -2.03
HERPUD1-212ENST00000567944 RASL11BQ9BPW5 248 aa2.34□□□□□ -2.03
HERPUD1-212ENST00000567944 MICU1Q9BPX6 476 aa2.34□□□□□ -2.03
HERPUD1-212ENST00000567944 CCDC32Q9BV29 185 aa2.34□□□□□ -2.03
HERPUD1-212ENST00000567944 RIOK2Q9BVS4 552 aaKnown RBP2.34□□□□□ -2.03
HERPUD1-212ENST00000567944 ROPN1BQ9BZX4 212 aaPredicted RBP2.34□□□□□ -2.03
HERPUD1-212ENST00000567944 ZNF436Q9C0F3 470 aaPredicted RBP2.34□□□□□ -2.03
HERPUD1-212ENST00000567944 PORCNQ9H237 461 aa2.34□□□□□ -2.03
HERPUD1-212ENST00000567944 DCSTAMPQ9H295 470 aa2.34□□□□□ -2.03
HERPUD1-212ENST00000567944 BOLA2Q9H3K6 86 aa2.34□□□□□ -2.03
HERPUD1-212ENST00000567944 ELOVL6Q9H5J4 265 aa2.34□□□□□ -2.03
HERPUD1-212ENST00000567944 SLC25A22Q9H936 323 aa2.34□□□□□ -2.03
HERPUD1-212ENST00000567944 WDR54Q9H977 334 aa2.34□□□□□ -2.03
HERPUD1-212ENST00000567944 RAB18Q9NP72 206 aa2.34□□□□□ -2.03
HERPUD1-212ENST00000567944 SLCO1B3Q9NPD5 702 aa2.34□□□□□ -2.03
HERPUD1-212ENST00000567944 SPANXB1Q9NS25 103 aaPredicted RBP2.34□□□□□ -2.03
HERPUD1-212ENST00000567944 SCN3BQ9NY72 215 aa2.34□□□□□ -2.03
HERPUD1-212ENST00000567944 RASL12Q9NYN1 266 aa2.34□□□□□ -2.03
HERPUD1-212ENST00000567944 TAS2R13Q9NYV9 303 aa2.34□□□□□ -2.03
HERPUD1-212ENST00000567944 PISDQ9UG56 409 aa2.34□□□□□ -2.03
HERPUD1-212ENST00000567944 SMPXQ9UHP9 88 aa2.34□□□□□ -2.03
HERPUD1-212ENST00000567944 TBX21Q9UL17 535 aa2.34□□□□□ -2.03
HERPUD1-212ENST00000567944 C14orf166Q9Y224 244 aaKnown RBP2.34□□□□□ -2.03
HERPUD1-212ENST00000567944 FARSAQ9Y285 508 aaKnown RBP2.34□□□□□ -2.03
HERPUD1-212ENST00000567944 ASF1AQ9Y294 204 aa2.34□□□□□ -2.03
HERPUD1-212ENST00000567944 PIGLQ9Y2B2 252 aa2.34□□□□□ -2.03
HERPUD1-212ENST00000567944 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.34□□□□□ -2.03
HERPUD1-212ENST00000567944 RHBDD3Q9Y3P4 386 aa2.34□□□□□ -2.03
HERPUD1-212ENST00000567944 LOXHD1Q8IVV2 1947 aa2.34□□□□□ -2.04
HERPUD1-212ENST00000567944 KNTC1P50748 2209 aa2.34□□□□□ -2.04
HERPUD1-212ENST00000567944 DMDP11532 3685 aa2.33□□□□□ -2.04
HERPUD1-212ENST00000567944 SDK1Q7Z5N4 2213 aa2.33□□□□□ -2.04
HERPUD1-212ENST00000567944 MYH7BA7E2Y1 1941 aa2.33□□□□□ -2.04
HERPUD1-212ENST00000567944 MYH7P12883 1935 aa2.33□□□□□ -2.04
HERPUD1-212ENST00000567944 BAZ2AQ9UIF9 1905 aaKnown RBP2.33□□□□□ -2.04
HERPUD1-212ENST00000567944 MYH4Q9Y623 1939 aa2.33□□□□□ -2.04
HERPUD1-212ENST00000567944 IGHV3-64DA0A0J9YX35 117 aa2.33□□□□□ -2.04
HERPUD1-212ENST00000567944 A0A0X1KG70 313 aa2.33□□□□□ -2.04
HERPUD1-212ENST00000567944 CIB4A0PJX0 185 aa2.33□□□□□ -2.04
HERPUD1-212ENST00000567944 A6NDX4 124 aa2.33□□□□□ -2.04
HERPUD1-212ENST00000567944 HACD1B0YJ81 288 aa2.33□□□□□ -2.04
HERPUD1-212ENST00000567944 ANKRD63C9JTQ0 380 aa2.33□□□□□ -2.04
HERPUD1-212ENST00000567944 H3BSA7 217 aa2.33□□□□□ -2.04
HERPUD1-212ENST00000567944 RGS16O15492 202 aaPredicted RBP2.33□□□□□ -2.04
HERPUD1-212ENST00000567944 CYB5BO43169 146 aa2.33□□□□□ -2.04
HERPUD1-212ENST00000567944 SNAI2O43623 268 aa2.33□□□□□ -2.04
HERPUD1-212ENST00000567944 ENTPD5O75356 428 aa2.33□□□□□ -2.04
HERPUD1-212ENST00000567944 HSBP1O75506 76 aa2.33□□□□□ -2.04
HERPUD1-212ENST00000567944 EIF3GO75821 320 aaKnown RBP eCLIP2.33□□□□□ -2.04
HERPUD1-212ENST00000567944 PIAS1O75925 651 aa2.33□□□□□ -2.04
HERPUD1-212ENST00000567944 OR2J2O76002 312 aa2.33□□□□□ -2.04
HERPUD1-212ENST00000567944 CYB5R3P00387 301 aaPredicted RBP2.33□□□□□ -2.04
HERPUD1-212ENST00000567944 CD2P06729 351 aa2.33□□□□□ -2.04
HERPUD1-212ENST00000567944 C8GP07360 202 aa2.33□□□□□ -2.04
HERPUD1-212ENST00000567944 BPGMP07738 259 aa2.33□□□□□ -2.04
HERPUD1-212ENST00000567944 MYL2P10916 166 aa2.33□□□□□ -2.04
HERPUD1-212ENST00000567944 KCNE1P15382 129 aa2.33□□□□□ -2.04
HERPUD1-212ENST00000567944 HIST1H1BP16401 226 aaKnown RBP2.33□□□□□ -2.04
HERPUD1-212ENST00000567944 ZNF30P17039 623 aa2.33□□□□□ -2.04
HERPUD1-212ENST00000567944 COX5AP20674 150 aa2.33□□□□□ -2.04
HERPUD1-212ENST00000567944 FGF7P21781 194 aa2.33□□□□□ -2.04
HERPUD1-212ENST00000567944 HTR1FP30939 366 aa2.33□□□□□ -2.04
HERPUD1-212ENST00000567944 KIR2DS4P43632 304 aa2.33□□□□□ -2.04
HERPUD1-212ENST00000567944 MAP2K4P45985 399 aa2.33□□□□□ -2.04
HERPUD1-212ENST00000567944 PPT1P50897 306 aa2.33□□□□□ -2.04
HERPUD1-212ENST00000567944 RPL14P50914 215 aaKnown RBP2.33□□□□□ -2.04
HERPUD1-212ENST00000567944 RORCP51449 518 aa2.33□□□□□ -2.04
HERPUD1-212ENST00000567944 XKP51811 444 aa2.33□□□□□ -2.04
HERPUD1-212ENST00000567944 CRISP3P54108 245 aa2.33□□□□□ -2.04
HERPUD1-212ENST00000567944 FGF8P55075 233 aaPredicted RBP2.33□□□□□ -2.04
HERPUD1-212ENST00000567944 PIGPP57054 158 aa2.33□□□□□ -2.04
HERPUD1-212ENST00000567944 OR2B8PP59922 312 aa2.33□□□□□ -2.04
HERPUD1-212ENST00000567944 RANP62826 216 aaKnown RBP2.33□□□□□ -2.04
HERPUD1-212ENST00000567944 FAM3AP98173 230 aa2.33□□□□□ -2.04
HERPUD1-212ENST00000567944 AESQ08117 197 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms