RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 DPCDQ9BVM2 203 aaPredicted RBP12.35□□□□□ -0.43
COMMD4-221ENST00000567935 CLEC4MQ9H2X3 399 aaPredicted RBP12.35□□□□□ -0.43
COMMD4-221ENST00000567935 ZNF581Q9P0T4 197 aa12.35□□□□□ -0.43
COMMD4-221ENST00000567935 MAP1AP78559 2803 aaPredicted RBP12.35□□□□□ -0.43
COMMD4-221ENST00000567935 NSD1Q96L73 2696 aaPredicted RBP12.34□□□□□ -0.43
COMMD4-221ENST00000567935 IGKV1D-8A0A087WSZ0 117 aa12.34□□□□□ -0.43
COMMD4-221ENST00000567935 TRAV24A0A0B4J272 114 aa12.34□□□□□ -0.43
COMMD4-221ENST00000567935 A6NLC8 198 aa12.34□□□□□ -0.43
COMMD4-221ENST00000567935 F5H5P2 479 aa12.34□□□□□ -0.43
COMMD4-221ENST00000567935 H0YL77 283 aa12.34□□□□□ -0.43
COMMD4-221ENST00000567935 SDCBPO00560 298 aaPredicted RBP12.34□□□□□ -0.43
COMMD4-221ENST00000567935 SLC22A5O76082 557 aa12.34□□□□□ -0.43
COMMD4-221ENST00000567935 KNG1P01042 644 aa12.34□□□□□ -0.43
COMMD4-221ENST00000567935 PGAM2P15259 253 aa12.34□□□□□ -0.43
COMMD4-221ENST00000567935 ZNF44P15621 663 aa12.34□□□□□ -0.43
COMMD4-221ENST00000567935 DNASE1P24855 282 aa12.34□□□□□ -0.43
COMMD4-221ENST00000567935 CHRNB4P30926 498 aa12.34□□□□□ -0.43
COMMD4-221ENST00000567935 PPP1R1AQ13522 171 aa12.34□□□□□ -0.43
COMMD4-221ENST00000567935 SMIM21Q3B7S5 101 aa12.34□□□□□ -0.43
COMMD4-221ENST00000567935 ZNF880Q6PDB4 577 aa12.34□□□□□ -0.43
COMMD4-221ENST00000567935 Q6ZR03 302 aa12.34□□□□□ -0.43
COMMD4-221ENST00000567935 OR2T35Q8NGX2 323 aa12.34□□□□□ -0.43
COMMD4-221ENST00000567935 ZNF488Q96MN9 340 aa12.34□□□□□ -0.43
COMMD4-221ENST00000567935 ZNF2Q9BSG1 426 aaPredicted RBP12.34□□□□□ -0.43
COMMD4-221ENST00000567935 TMPRSS13Q9BYE2 586 aa12.34□□□□□ -0.43
COMMD4-221ENST00000567935 C5orf66Q9H5L9 145 aa12.34□□□□□ -0.43
COMMD4-221ENST00000567935 PAIP2BQ9ULR5 123 aaKnown RBP12.34□□□□□ -0.43
COMMD4-221ENST00000567935 ATP23Q9Y6H3 246 aa12.34□□□□□ -0.43
COMMD4-221ENST00000567935 STAB1Q9NY15 2570 aa12.34□□□□□ -0.43
COMMD4-221ENST00000567935 FLNAP21333 2647 aaKnown RBP12.33□□□□□ -0.44
COMMD4-221ENST00000567935 NBEAL1Q6ZS30 2694 aa12.33□□□□□ -0.44
COMMD4-221ENST00000567935 OR5H14A6NHG9 310 aa12.33□□□□□ -0.44
COMMD4-221ENST00000567935 TRDCB7Z8K6 153 aa12.33□□□□□ -0.44
COMMD4-221ENST00000567935 ATP6V1G2-DDX39BF2Z307 99 aa12.33□□□□□ -0.44
COMMD4-221ENST00000567935 IFNL4K9M1U5 179 aa12.33□□□□□ -0.44
COMMD4-221ENST00000567935 SFT2D2O95562 160 aa12.33□□□□□ -0.44
COMMD4-221ENST00000567935 DIRAS3O95661 229 aa12.33□□□□□ -0.44
COMMD4-221ENST00000567935 TK1P04183 234 aa12.33□□□□□ -0.44
COMMD4-221ENST00000567935 C4BPBP20851 252 aa12.33□□□□□ -0.44
COMMD4-221ENST00000567935 LMO1P25800 156 aa12.33□□□□□ -0.44
COMMD4-221ENST00000567935 SRSF4Q08170 494 aaKnown RBP12.33□□□□□ -0.44
COMMD4-221ENST00000567935 PDCD1Q15116 288 aa12.33□□□□□ -0.44
COMMD4-221ENST00000567935 PAN3Q58A45 887 aaKnown RBP12.33□□□□□ -0.44
COMMD4-221ENST00000567935 BRICD5Q6PL45 260 aa12.33□□□□□ -0.44
COMMD4-221ENST00000567935 WDR82Q6UXN9 313 aa12.33□□□□□ -0.44
COMMD4-221ENST00000567935 C11orf53Q8IXP5 236 aa12.33□□□□□ -0.44
COMMD4-221ENST00000567935 GAPTQ8N292 157 aa12.33□□□□□ -0.44
COMMD4-221ENST00000567935 COQ8AQ8NI60 647 aa12.33□□□□□ -0.44
COMMD4-221ENST00000567935 MRPL24Q96A35 216 aaKnown RBP12.33□□□□□ -0.44
COMMD4-221ENST00000567935 PIK3IP1Q96FE7 263 aa12.33□□□□□ -0.44
COMMD4-221ENST00000567935 HS3ST6Q96QI5 342 aa12.33□□□□□ -0.44
COMMD4-221ENST00000567935 DIRC2Q96SL1 478 aa12.33□□□□□ -0.44
COMMD4-221ENST00000567935 WDR13Q9H1Z4 485 aa12.33□□□□□ -0.44
COMMD4-221ENST00000567935 FN3KRPQ9HA64 309 aa12.33□□□□□ -0.44
COMMD4-221ENST00000567935 COQ3Q9NZJ6 369 aa12.33□□□□□ -0.44
COMMD4-221ENST00000567935 PIPOXQ9P0Z9 390 aa12.33□□□□□ -0.44
COMMD4-221ENST00000567935 IL36RNQ9UBH0 155 aa12.33□□□□□ -0.44
COMMD4-221ENST00000567935 DUSP13Q9UII6 198 aa12.33□□□□□ -0.44
COMMD4-221ENST00000567935 ZDHHC8Q9ULC8 765 aa12.33□□□□□ -0.44
COMMD4-221ENST00000567935 FZR1Q9UM11 496 aa12.33□□□□□ -0.44
COMMD4-221ENST00000567935 GOSR2O14653 212 aa12.32□□□□□ -0.44
COMMD4-221ENST00000567935 OR2H2O95918 312 aa12.32□□□□□ -0.44
COMMD4-221ENST00000567935 HAND1O96004 215 aa12.32□□□□□ -0.44
COMMD4-221ENST00000567935 AKR1C4P17516 323 aa12.32□□□□□ -0.44
COMMD4-221ENST00000567935 TNFSF4P23510 183 aa12.32□□□□□ -0.44
COMMD4-221ENST00000567935 VAMP1P23763 118 aa12.32□□□□□ -0.44
COMMD4-221ENST00000567935 GATA4P43694 442 aa12.32□□□□□ -0.44
COMMD4-221ENST00000567935 HERV-K104P61576 105 aa12.32□□□□□ -0.44
COMMD4-221ENST00000567935 ALKBH2Q6NS38 261 aa12.32□□□□□ -0.44
COMMD4-221ENST00000567935 ACP7Q6ZNF0 438 aa12.32□□□□□ -0.44
COMMD4-221ENST00000567935 C17orf107Q6ZR85 190 aa12.32□□□□□ -0.44
COMMD4-221ENST00000567935 SLC38A6Q8IZM9 456 aa12.32□□□□□ -0.44
COMMD4-221ENST00000567935 BATF2Q8N1L9 274 aa12.32□□□□□ -0.44
COMMD4-221ENST00000567935 UXS1Q8NBZ7 420 aa12.32□□□□□ -0.44
COMMD4-221ENST00000567935 OR2Z1Q8NG97 314 aa12.32□□□□□ -0.44
COMMD4-221ENST00000567935 OR4A4PQ8NGN8 299 aa12.32□□□□□ -0.44
COMMD4-221ENST00000567935 OR5M8Q8NGP6 311 aa12.32□□□□□ -0.44
COMMD4-221ENST00000567935 DYRK2Q92630 601 aa12.32□□□□□ -0.44
COMMD4-221ENST00000567935 ERGIC1Q969X5 290 aa12.32□□□□□ -0.44
COMMD4-221ENST00000567935 MOB3AQ96BX8 217 aa12.32□□□□□ -0.44
COMMD4-221ENST00000567935 ELMOD3Q96FG2 381 aa12.32□□□□□ -0.44
COMMD4-221ENST00000567935 RTBDNQ9BSG5 229 aaPredicted RBP12.32□□□□□ -0.44
COMMD4-221ENST00000567935 GON7Q9BXV9 100 aa12.32□□□□□ -0.44
COMMD4-221ENST00000567935 SLA2Q9H6Q3 261 aa12.32□□□□□ -0.44
COMMD4-221ENST00000567935 MSL2Q9HCI7 577 aa12.32□□□□□ -0.44
COMMD4-221ENST00000567935 CA10Q9NS85 328 aa12.32□□□□□ -0.44
COMMD4-221ENST00000567935 SLC23A1Q9UHI7 598 aa12.32□□□□□ -0.44
COMMD4-221ENST00000567935 OPN4Q9UHM6 478 aa12.32□□□□□ -0.44
COMMD4-221ENST00000567935 COL6A5A8TX70 2615 aa12.32□□□□□ -0.44
COMMD4-221ENST00000567935 SLC33A1O00400 549 aaPredicted RBP12.31□□□□□ -0.44
COMMD4-221ENST00000567935 RGS13O14921 159 aa12.31□□□□□ -0.44
COMMD4-221ENST00000567935 ZNF728P0DKX0 622 aa12.31□□□□□ -0.44
COMMD4-221ENST00000567935 GLRA1P23415 457 aa12.31□□□□□ -0.44
COMMD4-221ENST00000567935 DUSP1P28562 367 aa12.31□□□□□ -0.44
COMMD4-221ENST00000567935 FCGR2CP31995 323 aa12.31□□□□□ -0.44
COMMD4-221ENST00000567935 GMFBP60983 142 aa12.31□□□□□ -0.44
COMMD4-221ENST00000567935 HLA-DRB3P79483 266 aa12.31□□□□□ -0.44
COMMD4-221ENST00000567935 FGL1Q08830 312 aa12.31□□□□□ -0.44
COMMD4-221ENST00000567935 WFDC8Q8IUA0 241 aa12.31□□□□□ -0.44
COMMD4-221ENST00000567935 FAM185AQ8N0U4 392 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms