RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 CLEC2DQ9UHP7 191 aa3.85□□□□□ -1.79
CLK3-219ENST00000567805 FOXJ3Q9UPW0 622 aa3.85□□□□□ -1.79
CLK3-219ENST00000567805 SIGLEC9Q9Y336 463 aa3.85□□□□□ -1.79
CLK3-219ENST00000567805 HILPDAQ9Y5L2 63 aa3.85□□□□□ -1.79
CLK3-219ENST00000567805 SIRT4Q9Y6E7 314 aaPredicted RBP3.85□□□□□ -1.79
CLK3-219ENST00000567805 PLXNB1O43157 2135 aa3.85□□□□□ -1.79
CLK3-219ENST00000567805 MEIKINA0A087WXM9 373 aa3.84□□□□□ -1.79
CLK3-219ENST00000567805 TRAV24A0A0B4J272 114 aa3.84□□□□□ -1.79
CLK3-219ENST00000567805 TRBV5-5A0A0J9YX44 114 aa3.84□□□□□ -1.79
CLK3-219ENST00000567805 FAM172BPA6NC97 362 aa3.84□□□□□ -1.79
CLK3-219ENST00000567805 OOSP1A8MZH6 123 aa3.84□□□□□ -1.79
CLK3-219ENST00000567805 BUB1B-PAK6H3BSN5 160 aa3.84□□□□□ -1.79
CLK3-219ENST00000567805 HSPB6O14558 160 aa3.84□□□□□ -1.79
CLK3-219ENST00000567805 MYL12BO14950 172 aa3.84□□□□□ -1.79
CLK3-219ENST00000567805 CASQ2O14958 399 aaPredicted RBP3.84□□□□□ -1.79
CLK3-219ENST00000567805 ZNF780AO75290 641 aaPredicted RBP3.84□□□□□ -1.79
CLK3-219ENST00000567805 PEX14O75381 377 aa3.84□□□□□ -1.79
CLK3-219ENST00000567805 GPX5O75715 221 aa3.84□□□□□ -1.79
CLK3-219ENST00000567805 OR7C1O76099 320 aaPredicted RBP3.84□□□□□ -1.79
CLK3-219ENST00000567805 CDRT1O95170 752 aa3.84□□□□□ -1.79
CLK3-219ENST00000567805 HTR3BO95264 441 aa3.84□□□□□ -1.79
CLK3-219ENST00000567805 LALBAP00709 142 aa3.84□□□□□ -1.79
CLK3-219ENST00000567805 IL1AP01583 271 aa3.84□□□□□ -1.79
CLK3-219ENST00000567805 CSTBP04080 98 aaKnown RBP3.84□□□□□ -1.79
CLK3-219ENST00000567805 GNAO1P09471 354 aa3.84□□□□□ -1.79
CLK3-219ENST00000567805 CGB3P0DN86 165 aa3.84□□□□□ -1.79
CLK3-219ENST00000567805 CGB7P0DN87 165 aa3.84□□□□□ -1.79
CLK3-219ENST00000567805 JUNBP17275 347 aaPredicted RBP3.84□□□□□ -1.79
CLK3-219ENST00000567805 IGFBP3P17936 291 aaPredicted RBP3.84□□□□□ -1.79
CLK3-219ENST00000567805 FSTP19883 344 aa3.84□□□□□ -1.79
CLK3-219ENST00000567805 SERPINA2P20848 420 aa3.84□□□□□ -1.79
CLK3-219ENST00000567805 NFYBP25208 207 aa3.84□□□□□ -1.79
CLK3-219ENST00000567805 GDNFP39905 211 aa3.84□□□□□ -1.79
CLK3-219ENST00000567805 MNDAP41218 407 aa3.84□□□□□ -1.79
CLK3-219ENST00000567805 GLP1RP43220 463 aa3.84□□□□□ -1.79
CLK3-219ENST00000567805 VDAC2P45880 294 aaPredicted RBP3.84□□□□□ -1.79
CLK3-219ENST00000567805 OR3A4PP47883 348 aa3.84□□□□□ -1.79
CLK3-219ENST00000567805 RBM11P57052 281 aaKnown RBP3.84□□□□□ -1.79
CLK3-219ENST00000567805 RPS11P62280 158 aaKnown RBP eCLIP3.84□□□□□ -1.79
CLK3-219ENST00000567805 RIPK1Q13546 671 aa3.84□□□□□ -1.79
CLK3-219ENST00000567805 GPR176Q14439 515 aa3.84□□□□□ -1.79
CLK3-219ENST00000567805 HABP2Q14520 560 aaPredicted RBP3.84□□□□□ -1.79
CLK3-219ENST00000567805 C17orf58Q2M2W7 97 aa3.84□□□□□ -1.79
CLK3-219ENST00000567805 MPV17LQ2QL34 196 aa3.84□□□□□ -1.79
CLK3-219ENST00000567805 HLA-DRB5Q30154 266 aa3.84□□□□□ -1.79
CLK3-219ENST00000567805 Q499Y3 187 aa3.84□□□□□ -1.79
CLK3-219ENST00000567805 PDLIM3Q53GG5 364 aaPredicted RBP3.84□□□□□ -1.79
CLK3-219ENST00000567805 TPTE2P1Q5T6R2 138 aa3.84□□□□□ -1.79
CLK3-219ENST00000567805 RSBN1Q5VWQ0 802 aaPredicted RBP3.84□□□□□ -1.79
CLK3-219ENST00000567805 BAIAP2L2Q6UXY1 529 aa3.84□□□□□ -1.79
CLK3-219ENST00000567805 SLC16A12Q6ZSM3 486 aa3.84□□□□□ -1.79
CLK3-219ENST00000567805 OSR2Q8N2R0 312 aa3.84□□□□□ -1.79
CLK3-219ENST00000567805 STX19Q8N4C7 294 aa3.84□□□□□ -1.79
CLK3-219ENST00000567805 ZNF485Q8NCK3 441 aa3.84□□□□□ -1.79
CLK3-219ENST00000567805 OR10A7Q8NGE5 316 aa3.84□□□□□ -1.79
CLK3-219ENST00000567805 OR13A1Q8NGR1 328 aa3.84□□□□□ -1.79
CLK3-219ENST00000567805 OR10K1Q8NGX5 313 aa3.84□□□□□ -1.79
CLK3-219ENST00000567805 OR9G1Q8NH87 305 aa3.84□□□□□ -1.79
CLK3-219ENST00000567805 FAM110DQ8TAY7 271 aaPredicted RBP3.84□□□□□ -1.79
CLK3-219ENST00000567805 WIPF2Q8TF74 440 aaPredicted RBP3.84□□□□□ -1.79
CLK3-219ENST00000567805 FBLIM1Q8WUP2 373 aa3.84□□□□□ -1.79
CLK3-219ENST00000567805 CAPSLQ8WWF8 208 aa3.84□□□□□ -1.79
CLK3-219ENST00000567805 THRSPQ92748 146 aa3.84□□□□□ -1.79
CLK3-219ENST00000567805 GGHQ92820 318 aa3.84□□□□□ -1.79
CLK3-219ENST00000567805 MRPS24Q96EL2 167 aaKnown RBP3.84□□□□□ -1.79
CLK3-219ENST00000567805 KIRREL1Q96J84 757 aa3.84□□□□□ -1.79
CLK3-219ENST00000567805 PGLYRP3Q96LB9 341 aa3.84□□□□□ -1.79
CLK3-219ENST00000567805 ZNF184Q99676 751 aaPredicted RBP3.84□□□□□ -1.79
CLK3-219ENST00000567805 DPCDQ9BVM2 203 aaPredicted RBP3.84□□□□□ -1.79
CLK3-219ENST00000567805 MMP28Q9H239 520 aa3.84□□□□□ -1.79
CLK3-219ENST00000567805 VCXQ9H320 206 aa3.84□□□□□ -1.79
CLK3-219ENST00000567805 LINC00574Q9H8X3 128 aa3.84□□□□□ -1.79
CLK3-219ENST00000567805 ZNF286AQ9HBT8 521 aa3.84□□□□□ -1.79
CLK3-219ENST00000567805 PLCXD1Q9NUJ7 323 aa3.84□□□□□ -1.79
CLK3-219ENST00000567805 ING3Q9NXR8 418 aa3.84□□□□□ -1.79
CLK3-219ENST00000567805 CALYQ9NYX4 217 aa3.84□□□□□ -1.79
CLK3-219ENST00000567805 IDI2-AS1Q9NZ38 188 aa3.84□□□□□ -1.79
CLK3-219ENST00000567805 PSORS1C1Q9UIG5 152 aa3.84□□□□□ -1.79
CLK3-219ENST00000567805 KIF25Q9UIL4 384 aa3.84□□□□□ -1.79
CLK3-219ENST00000567805 ING4Q9UNL4 249 aa3.84□□□□□ -1.79
CLK3-219ENST00000567805 ST3GAL6Q9Y274 331 aa3.84□□□□□ -1.79
CLK3-219ENST00000567805 AMMECR1Q9Y4X0 333 aaPredicted RBP3.84□□□□□ -1.79
CLK3-219ENST00000567805 WNK1Q9H4A3 2382 aa3.83□□□□□ -1.8
CLK3-219ENST00000567805 TRAV8-7A0A075B6U6 113 aa3.83□□□□□ -1.8
CLK3-219ENST00000567805 TRBV5-7A0A0A0MS05 114 aa3.83□□□□□ -1.8
CLK3-219ENST00000567805 PNMA8CA0A1B0GUJ8 204 aa3.83□□□□□ -1.8
CLK3-219ENST00000567805 TMEM30CPA0ZSE6 113 aa3.83□□□□□ -1.8
CLK3-219ENST00000567805 NPIPB11E5RHQ5 1161 aa3.83□□□□□ -1.8
CLK3-219ENST00000567805 LY6LH3BQJ8 138 aa3.83□□□□□ -1.8
CLK3-219ENST00000567805 J3QR06 171 aa3.83□□□□□ -1.8
CLK3-219ENST00000567805 GEMIN2O14893 280 aaKnown RBP3.83□□□□□ -1.8
CLK3-219ENST00000567805 XPNPEP2O43895 674 aa3.83□□□□□ -1.8
CLK3-219ENST00000567805 OR2F2O95006 317 aa3.83□□□□□ -1.8
CLK3-219ENST00000567805 OPN1MWP04001 364 aa3.83□□□□□ -1.8
CLK3-219ENST00000567805 CD1AP06126 327 aa3.83□□□□□ -1.8
CLK3-219ENST00000567805 FAM106CPP0CH98 169 aa3.83□□□□□ -1.8
CLK3-219ENST00000567805 OPN1MW2P0DN77 364 aa3.83□□□□□ -1.8
CLK3-219ENST00000567805 OPN1MW3P0DN78 364 aa3.83□□□□□ -1.8
CLK3-219ENST00000567805 CD28P10747 220 aa3.83□□□□□ -1.8
CLK3-219ENST00000567805 GTF2F2P13984 249 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms