RNA–Protein interactions for RNA: ENST00000567188.5

CNOT1-211, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 1 (best)

Gene CNOT1, Length 7,830 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-211ENST00000567188 H0YIG0 161 aa5.3□□□□□ -1.56
CNOT1-211ENST00000567188 K7ESF4 209 aa5.3□□□□□ -1.56
CNOT1-211ENST00000567188 HLA-DQA1P01909 254 aa5.3□□□□□ -1.56
CNOT1-211ENST00000567188 MMP9P14780 707 aa5.3□□□□□ -1.56
CNOT1-211ENST00000567188 PTGER4P35408 488 aa5.3□□□□□ -1.56
CNOT1-211ENST00000567188 VASPP50552 380 aaPredicted RBP5.3□□□□□ -1.56
CNOT1-211ENST00000567188 HMGA2P52926 109 aa5.3□□□□□ -1.56
CNOT1-211ENST00000567188 LSM11P83369 360 aaKnown RBP eCLIP5.3□□□□□ -1.56
CNOT1-211ENST00000567188 ISXQ2M1V0 245 aa5.3□□□□□ -1.56
CNOT1-211ENST00000567188 TMEM211Q6ICI0 200 aa5.3□□□□□ -1.56
CNOT1-211ENST00000567188 CLEC2AQ6UVW9 174 aa5.3□□□□□ -1.56
CNOT1-211ENST00000567188 CYB561A3Q8NBI2 242 aa5.3□□□□□ -1.56
CNOT1-211ENST00000567188 ELOVL3Q9HB03 270 aa5.3□□□□□ -1.56
CNOT1-211ENST00000567188 GUSBP08236 651 aa5.3□□□□□ -1.56
CNOT1-211ENST00000567188 ZGLP1P0C6A0 271 aa5.3□□□□□ -1.56
CNOT1-211ENST00000567188 APOBEC1P41238 236 aaKnown RBP5.3□□□□□ -1.56
CNOT1-211ENST00000567188 RAE1P78406 368 aaKnown RBP5.3□□□□□ -1.56
CNOT1-211ENST00000567188 SRSF6Q13247 344 aaKnown RBP5.3□□□□□ -1.56
CNOT1-211ENST00000567188 C17orf78Q8N4C9 275 aa5.3□□□□□ -1.56
CNOT1-211ENST00000567188 GPBAR1Q8TDU6 330 aa5.3□□□□□ -1.56
CNOT1-211ENST00000567188 TMEM186Q96B77 213 aa5.3□□□□□ -1.56
CNOT1-211ENST00000567188 WDR13Q9H1Z4 485 aa5.3□□□□□ -1.56
CNOT1-211ENST00000567188 RIMS4Q9H426 269 aaPredicted RBP5.3□□□□□ -1.56
CNOT1-211ENST00000567188 CHODLQ9H9P2 273 aa5.3□□□□□ -1.56
CNOT1-211ENST00000567188 RNF122Q9H9V4 155 aa5.3□□□□□ -1.56
CNOT1-211ENST00000567188 SIRT5Q9NXA8 310 aa5.3□□□□□ -1.56
CNOT1-211ENST00000567188 ZNF391Q9UJN7 358 aa5.3□□□□□ -1.56
CNOT1-211ENST00000567188 A0A1B0GX78 115 aa5.29□□□□□ -1.56
CNOT1-211ENST00000567188 EREGO14944 169 aa5.29□□□□□ -1.56
CNOT1-211ENST00000567188 CTNSO60931 367 aa5.29□□□□□ -1.56
CNOT1-211ENST00000567188 PRR35P0CG20 571 aa5.29□□□□□ -1.56
CNOT1-211ENST00000567188 CXCL3P19876 107 aa5.29□□□□□ -1.56
CNOT1-211ENST00000567188 CTSSP25774 331 aa5.29□□□□□ -1.56
CNOT1-211ENST00000567188 CAPZBP47756 277 aa5.29□□□□□ -1.56
CNOT1-211ENST00000567188 PNLIPRP2P54317 469 aa5.29□□□□□ -1.56
CNOT1-211ENST00000567188 SLC25A42Q86VD7 318 aa5.29□□□□□ -1.56
CNOT1-211ENST00000567188 SLC25A45Q8N413 288 aa5.29□□□□□ -1.56
CNOT1-211ENST00000567188 OR52B4Q8NGK2 314 aa5.29□□□□□ -1.56
CNOT1-211ENST00000567188 WDR61Q9GZS3 305 aaKnown RBP5.29□□□□□ -1.56
CNOT1-211ENST00000567188 CHST5Q9GZS9 411 aa5.29□□□□□ -1.56
CNOT1-211ENST00000567188 PLXNA2O75051 1894 aa5.29□□□□□ -1.56
CNOT1-211ENST00000567188 PRR33A8MZF0 331 aa5.29□□□□□ -1.56
CNOT1-211ENST00000567188 GNG7O60262 68 aa5.29□□□□□ -1.56
CNOT1-211ENST00000567188 FBXO45P0C2W1 286 aa5.29□□□□□ -1.56
CNOT1-211ENST00000567188 SUB1P53999 127 aaKnown RBP eCLIP5.29□□□□□ -1.563e-6■■□□□ 12.5
CNOT1-211ENST00000567188 PMVKQ15126 192 aa5.29□□□□□ -1.56
CNOT1-211ENST00000567188 OTPQ5XKR4 325 aa5.29□□□□□ -1.56
CNOT1-211ENST00000567188 MFSD12Q6NUT3 480 aa5.29□□□□□ -1.56
CNOT1-211ENST00000567188 MKXQ8IYA7 352 aa5.29□□□□□ -1.56
CNOT1-211ENST00000567188 OR2M3Q8NG83 312 aa5.29□□□□□ -1.56
CNOT1-211ENST00000567188 BAHD1Q8TBE0 780 aaPredicted RBP5.29□□□□□ -1.56
CNOT1-211ENST00000567188 IP6K3Q96PC2 410 aa5.29□□□□□ -1.56
CNOT1-211ENST00000567188 PDCD1LG2Q9BQ51 273 aa5.29□□□□□ -1.56
CNOT1-211ENST00000567188 CISD1Q9NZ45 108 aaKnown RBP5.29□□□□□ -1.56
CNOT1-211ENST00000567188 ATP23Q9Y6H3 246 aa5.29□□□□□ -1.56
CNOT1-211ENST00000567188 TDRD6O60522 2096 aaKnown RBP5.29□□□□□ -1.56
CNOT1-211ENST00000567188 SPTBP11277 2137 aa5.29□□□□□ -1.56
CNOT1-211ENST00000567188 ZNF737O75373 536 aa5.29□□□□□ -1.56
CNOT1-211ENST00000567188 IGF2P01344 180 aa5.29□□□□□ -1.56
CNOT1-211ENST00000567188 LIFP15018 202 aa5.29□□□□□ -1.56
CNOT1-211ENST00000567188 UBE2DNLQ8IWF7 75 aa5.29□□□□□ -1.56
CNOT1-211ENST00000567188 OR2A1Q8NGT9 310 aa5.29□□□□□ -1.56
CNOT1-211ENST00000567188 GRAMD2BQ96HH9 432 aa5.29□□□□□ -1.56
CNOT1-211ENST00000567188 FAM60AQ9NP50 221 aa5.29□□□□□ -1.56
CNOT1-211ENST00000567188 MYOFQ9NZM1 2061 aa5.29□□□□□ -1.56
CNOT1-211ENST00000567188 HEATR5BQ9P2D3 2071 aa5.29□□□□□ -1.56
CNOT1-211ENST00000567188 PLPP1O14494 284 aa5.29□□□□□ -1.56
CNOT1-211ENST00000567188 ZFPL1O95159 310 aa5.29□□□□□ -1.56
CNOT1-211ENST00000567188 IGHV2-70P01814 119 aa5.29□□□□□ -1.56
CNOT1-211ENST00000567188 SELENOTP62341 195 aa5.29□□□□□ -1.56
CNOT1-211ENST00000567188 SEC11AP67812 179 aa5.29□□□□□ -1.56
CNOT1-211ENST00000567188 ANKRD39Q53RE8 183 aa5.29□□□□□ -1.56
CNOT1-211ENST00000567188 ZNF684Q5T5D7 378 aa5.29□□□□□ -1.56
CNOT1-211ENST00000567188 C8orf82Q6P1X6 216 aaPredicted RBP5.29□□□□□ -1.56
CNOT1-211ENST00000567188 ABHD17CQ6PCB6 329 aa5.29□□□□□ -1.56
CNOT1-211ENST00000567188 WDFY1Q8IWB7 410 aa5.29□□□□□ -1.56
CNOT1-211ENST00000567188 COX14Q96I36 57 aa5.29□□□□□ -1.56
CNOT1-211ENST00000567188 SGCZQ96LD1 299 aa5.29□□□□□ -1.56
CNOT1-211ENST00000567188 HSPB9Q9BQS6 159 aa5.29□□□□□ -1.56
CNOT1-211ENST00000567188 PARLQ9H300 379 aa5.29□□□□□ -1.56
CNOT1-211ENST00000567188 TP53BP1Q12888 1972 aaPredicted RBP5.29□□□□□ -1.56
CNOT1-211ENST00000567188 COX5BP10606 129 aa5.29□□□□□ -1.56
CNOT1-211ENST00000567188 ZBTB25P24278 435 aa5.29□□□□□ -1.56
CNOT1-211ENST00000567188 MC5RP33032 325 aa5.29□□□□□ -1.56
CNOT1-211ENST00000567188 LIMS1P48059 325 aa5.29□□□□□ -1.56
CNOT1-211ENST00000567188 PRICKLE4Q2TBC4 344 aa5.29□□□□□ -1.56
CNOT1-211ENST00000567188 GDF7Q7Z4P5 450 aa5.29□□□□□ -1.56
CNOT1-211ENST00000567188 OR8B3Q8NGG8 313 aa5.29□□□□□ -1.56
CNOT1-211ENST00000567188 ST8SIA1Q92185 356 aa5.29□□□□□ -1.56
CNOT1-211ENST00000567188 SLC35A4Q96G79 324 aa5.29□□□□□ -1.56
CNOT1-211ENST00000567188 ABHD1Q96SE0 405 aa5.29□□□□□ -1.56
CNOT1-211ENST00000567188 SPXQ9BT56 116 aa5.29□□□□□ -1.56
CNOT1-211ENST00000567188 SSBP4Q9BWG4 385 aaPredicted RBP5.29□□□□□ -1.56
CNOT1-211ENST00000567188 CHST8Q9H2A9 424 aa5.29□□□□□ -1.56
CNOT1-211ENST00000567188 MRPS18AQ9NVS2 196 aaKnown RBP5.29□□□□□ -1.56
CNOT1-211ENST00000567188 MTCH1Q9NZJ7 389 aa5.29□□□□□ -1.56
CNOT1-211ENST00000567188 BMPR1BO00238 502 aa5.29□□□□□ -1.56
CNOT1-211ENST00000567188 ARPC3O15145 178 aa5.29□□□□□ -1.56
CNOT1-211ENST00000567188 OR5AL1P0C617 328 aa5.29□□□□□ -1.56
CNOT1-211ENST00000567188 SMIM13P0DJ93 91 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms