RNA–Protein interactions for RNA: ENST00000567023.5

COMMD4-216, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 926 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-216ENST00000567023 TMEM95Q3KNT9 176 aa11.37□□□□□ -0.59
COMMD4-216ENST00000567023 PAN3Q58A45 887 aaKnown RBP11.37□□□□□ -0.59
COMMD4-216ENST00000567023 ARSJQ5FYB0 599 aaPredicted RBP11.37□□□□□ -0.59
COMMD4-216ENST00000567023 NHLRC3Q5JS37 347 aa11.37□□□□□ -0.59
COMMD4-216ENST00000567023 UTF1Q5T230 341 aa11.37□□□□□ -0.59
COMMD4-216ENST00000567023 RSBN1Q5VWQ0 802 aaPredicted RBP11.37□□□□□ -0.59
COMMD4-216ENST00000567023 TMPRSS11AQ6ZMR5 421 aa11.37□□□□□ -0.59
COMMD4-216ENST00000567023 SLC16A12Q6ZSM3 486 aa11.37□□□□□ -0.59
COMMD4-216ENST00000567023 REC114Q7Z4M0 266 aa11.37□□□□□ -0.59
COMMD4-216ENST00000567023 SATL1Q86VE3 508 aa11.37□□□□□ -0.59
COMMD4-216ENST00000567023 THNSL2Q86YJ6 484 aa11.37□□□□□ -0.59
COMMD4-216ENST00000567023 ZNF485Q8NCK3 441 aa11.37□□□□□ -0.59
COMMD4-216ENST00000567023 WFDC9Q8NEX5 89 aa11.37□□□□□ -0.59
COMMD4-216ENST00000567023 OR5AU1Q8NGC0 362 aa11.37□□□□□ -0.59
COMMD4-216ENST00000567023 OR10A7Q8NGE5 316 aa11.37□□□□□ -0.59
COMMD4-216ENST00000567023 OR52N1Q8NH53 320 aa11.37□□□□□ -0.59
COMMD4-216ENST00000567023 TMEM106AQ96A25 262 aa11.37□□□□□ -0.59
COMMD4-216ENST00000567023 R3HDM4Q96D70 268 aa11.37□□□□□ -0.59
COMMD4-216ENST00000567023 NR1H4Q96RI1 486 aaPredicted RBP11.37□□□□□ -0.59
COMMD4-216ENST00000567023 GPER1Q99527 375 aa11.37□□□□□ -0.59
COMMD4-216ENST00000567023 SLC25A33Q9BSK2 321 aa11.37□□□□□ -0.59
COMMD4-216ENST00000567023 TMEM138Q9NPI0 162 aa11.37□□□□□ -0.59
COMMD4-216ENST00000567023 PCDHB16Q9NRJ7 776 aa11.37□□□□□ -0.59
COMMD4-216ENST00000567023 BABAM2Q9NXR7 383 aa11.37□□□□□ -0.59
COMMD4-216ENST00000567023 TAS2R4Q9NYW5 299 aa11.37□□□□□ -0.59
COMMD4-216ENST00000567023 CALYQ9NYX4 217 aa11.37□□□□□ -0.59
COMMD4-216ENST00000567023 IL36GQ9NZH8 169 aa11.37□□□□□ -0.59
COMMD4-216ENST00000567023 CLEC2DQ9UHP7 191 aa11.37□□□□□ -0.59
COMMD4-216ENST00000567023 KIF25Q9UIL4 384 aa11.37□□□□□ -0.59
COMMD4-216ENST00000567023 MEIKINA0A087WXM9 373 aa11.36□□□□□ -0.59
COMMD4-216ENST00000567023 J3QR06 171 aa11.36□□□□□ -0.59
COMMD4-216ENST00000567023 M0QZK8 103 aa11.36□□□□□ -0.59
COMMD4-216ENST00000567023 HSPB6O14558 160 aa11.36□□□□□ -0.59
COMMD4-216ENST00000567023 IL1AP01583 271 aa11.36□□□□□ -0.59
COMMD4-216ENST00000567023 FAM106CPP0CH98 169 aa11.36□□□□□ -0.59
COMMD4-216ENST00000567023 MYL12AP19105 171 aa11.36□□□□□ -0.59
COMMD4-216ENST00000567023 MYF6P23409 242 aa11.36□□□□□ -0.59
COMMD4-216ENST00000567023 ABCA11PQ4W5N1 156 aa11.36□□□□□ -0.59
COMMD4-216ENST00000567023 FBLN7Q53RD9 439 aa11.36□□□□□ -0.59
COMMD4-216ENST00000567023 C6orf141Q5SZD1 244 aa11.36□□□□□ -0.59
COMMD4-216ENST00000567023 OR2G6Q5TZ20 316 aa11.36□□□□□ -0.59
COMMD4-216ENST00000567023 OR13A1Q8NGR1 328 aa11.36□□□□□ -0.59
COMMD4-216ENST00000567023 CAPSLQ8WWF8 208 aa11.36□□□□□ -0.59
COMMD4-216ENST00000567023 SMIM19Q96E16 107 aa11.36□□□□□ -0.59
COMMD4-216ENST00000567023 ANKRD60Q9BZ19 345 aa11.36□□□□□ -0.59
COMMD4-216ENST00000567023 ING3Q9NXR8 418 aa11.36□□□□□ -0.59
COMMD4-216ENST00000567023 IDI2-AS1Q9NZ38 188 aa11.36□□□□□ -0.59
COMMD4-216ENST00000567023 ZNF281Q9Y2X9 895 aa11.36□□□□□ -0.59
COMMD4-216ENST00000567023 SIRT4Q9Y6E7 314 aaPredicted RBP11.36□□□□□ -0.59
COMMD4-216ENST00000567023 GPX5O75715 221 aa11.35□□□□□ -0.59
COMMD4-216ENST00000567023 LPLP06858 475 aa11.35□□□□□ -0.59
COMMD4-216ENST00000567023 NFYBP25208 207 aa11.35□□□□□ -0.59
COMMD4-216ENST00000567023 ZNF93P35789 620 aaPredicted RBP11.35□□□□□ -0.59
COMMD4-216ENST00000567023 GLP1RP43220 463 aa11.35□□□□□ -0.59
COMMD4-216ENST00000567023 OR3A4PP47883 348 aa11.35□□□□□ -0.59
COMMD4-216ENST00000567023 HSPA13P48723 471 aa11.35□□□□□ -0.59
COMMD4-216ENST00000567023 MED21Q13503 144 aa11.35□□□□□ -0.59
COMMD4-216ENST00000567023 PIGYQ3MUY2 71 aa11.35□□□□□ -0.59
COMMD4-216ENST00000567023 OXLD1Q5BKU9 147 aa11.35□□□□□ -0.59
COMMD4-216ENST00000567023 TCTEX1D4Q5JR98 221 aa11.35□□□□□ -0.59
COMMD4-216ENST00000567023 RNLSQ5VYX0 342 aa11.35□□□□□ -0.59
COMMD4-216ENST00000567023 IZUMO2Q6UXV1 221 aa11.35□□□□□ -0.59
COMMD4-216ENST00000567023 CENPVQ7Z7K6 275 aaPredicted RBP11.35□□□□□ -0.59
COMMD4-216ENST00000567023 LINC00596Q86U02 117 aa11.35□□□□□ -0.59
COMMD4-216ENST00000567023 BPIFB6Q8NFQ5 453 aa11.35□□□□□ -0.59
COMMD4-216ENST00000567023 OR10K1Q8NGX5 313 aa11.35□□□□□ -0.59
COMMD4-216ENST00000567023 FAM192AQ9GZU8 254 aa11.35□□□□□ -0.59
COMMD4-216ENST00000567023 PAK1IP1Q9NWT1 392 aaPredicted RBP11.35□□□□□ -0.59
COMMD4-216ENST00000567023 PSG11Q9UQ72 335 aa11.35□□□□□ -0.59
COMMD4-216ENST00000567023 ST3GAL6Q9Y274 331 aa11.35□□□□□ -0.59
COMMD4-216ENST00000567023 AMMECR1Q9Y4X0 333 aaPredicted RBP11.35□□□□□ -0.59
COMMD4-216ENST00000567023 ZNF780AO75290 641 aaPredicted RBP11.34□□□□□ -0.59
COMMD4-216ENST00000567023 CDRT1O95170 752 aa11.34□□□□□ -0.59
COMMD4-216ENST00000567023 HTR3BO95264 441 aa11.34□□□□□ -0.59
COMMD4-216ENST00000567023 LALBAP00709 142 aa11.34□□□□□ -0.59
COMMD4-216ENST00000567023 IGFBP3P17936 291 aaPredicted RBP11.34□□□□□ -0.59
COMMD4-216ENST00000567023 GZMHP20718 246 aa11.34□□□□□ -0.59
COMMD4-216ENST00000567023 BDKRB2P30411 391 aa11.34□□□□□ -0.59
COMMD4-216ENST00000567023 PPP3R1P63098 170 aa11.34□□□□□ -0.59
COMMD4-216ENST00000567023 MADCAM1Q13477 382 aa11.34□□□□□ -0.59
COMMD4-216ENST00000567023 RBM39Q14498 530 aaKnown RBP11.34□□□□□ -0.59
COMMD4-216ENST00000567023 DMKNQ6E0U4 476 aaPredicted RBP11.34□□□□□ -0.59
COMMD4-216ENST00000567023 AHSA2Q719I0 299 aa11.34□□□□□ -0.59
COMMD4-216ENST00000567023 OSR2Q8N2R0 312 aa11.34□□□□□ -0.59
COMMD4-216ENST00000567023 SUMF2Q8NBJ7 301 aa11.34□□□□□ -0.59
COMMD4-216ENST00000567023 PLPPR1Q8TBJ4 325 aa11.34□□□□□ -0.59
COMMD4-216ENST00000567023 GHSRQ92847 366 aa11.34□□□□□ -0.59
COMMD4-216ENST00000567023 RPEQ96AT9 228 aa11.34□□□□□ -0.59
COMMD4-216ENST00000567023 DPCDQ9BVM2 203 aaPredicted RBP11.34□□□□□ -0.59
COMMD4-216ENST00000567023 METTL9Q9H1A3 318 aa11.34□□□□□ -0.59
COMMD4-216ENST00000567023 CHCHD3Q9NX63 227 aaKnown RBP11.34□□□□□ -0.59
COMMD4-216ENST00000567023 TSSC4Q9Y5U2 329 aaPredicted RBP11.34□□□□□ -0.59
COMMD4-216ENST00000567023 TRBV5-5A0A0J9YX44 114 aa11.33□□□□□ -0.6
COMMD4-216ENST00000567023 CSTBP04080 98 aaKnown RBP11.33□□□□□ -0.6
COMMD4-216ENST00000567023 CDK1P06493 297 aa11.33□□□□□ -0.6
COMMD4-216ENST00000567023 RAB7AP51149 207 aa11.33□□□□□ -0.6
COMMD4-216ENST00000567023 RBM11P57052 281 aaKnown RBP11.33□□□□□ -0.6
COMMD4-216ENST00000567023 RPS11P62280 158 aaKnown RBP eCLIP11.33□□□□□ -0.6
COMMD4-216ENST00000567023 MPV17LQ2QL34 196 aa11.33□□□□□ -0.6
COMMD4-216ENST00000567023 YIF1BQ5BJH7 314 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms