RNA–Protein interactions for RNA: ENST00000566339.5

SPSB3-208, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-208ENST00000566339 CISD1Q9NZ45 108 aaKnown RBP18.58■□□□□ 0.56
SPSB3-208ENST00000566339 ZNF581Q9P0T4 197 aa18.58■□□□□ 0.56
SPSB3-208ENST00000566339 LIPGQ9Y5X9 500 aa18.58■□□□□ 0.56
SPSB3-208ENST00000566339 TRBV6-6A0A0A6YYG2 114 aa18.57■□□□□ 0.56
SPSB3-208ENST00000566339 IGHV3-15A0A0B4J1V0 119 aa18.57■□□□□ 0.56
SPSB3-208ENST00000566339 A0A1B0GU03 582 aa18.57■□□□□ 0.56
SPSB3-208ENST00000566339 ADAM20O43506 726 aa18.57■□□□□ 0.56
SPSB3-208ENST00000566339 PSG4Q00888 419 aa18.57■□□□□ 0.56
SPSB3-208ENST00000566339 ZNF92Q03936 586 aa18.57■□□□□ 0.56
SPSB3-208ENST00000566339 ZNF674Q2M3X9 581 aa18.57■□□□□ 0.56
SPSB3-208ENST00000566339 IGSF11Q5DX21 431 aa18.57■□□□□ 0.56
SPSB3-208ENST00000566339 Q6ZPA2 131 aa18.57■□□□□ 0.56
SPSB3-208ENST00000566339 STX12Q86Y82 276 aa18.57■□□□□ 0.56
SPSB3-208ENST00000566339 Q8WTZ3 238 aa18.57■□□□□ 0.56
SPSB3-208ENST00000566339 DYRK2Q92630 601 aa18.57■□□□□ 0.56
SPSB3-208ENST00000566339 FOXB1Q99853 325 aa18.57■□□□□ 0.56
SPSB3-208ENST00000566339 ZNF716A6NP11 495 aa18.56■□□□□ 0.56
SPSB3-208ENST00000566339 ZNF587BE7ETH6 402 aa18.56■□□□□ 0.56
SPSB3-208ENST00000566339 IFNA5P01569 189 aa18.56■□□□□ 0.56
SPSB3-208ENST00000566339 CCL3P10147 92 aa18.56■□□□□ 0.56
SPSB3-208ENST00000566339 FGF12P61328 243 aa18.56■□□□□ 0.56
SPSB3-208ENST00000566339 RPL23AP62750 156 aaKnown RBP18.56■□□□□ 0.56
SPSB3-208ENST00000566339 IL11RAQ14626 422 aa18.56■□□□□ 0.56
SPSB3-208ENST00000566339 ABLIM2Q6H8Q1 611 aa18.56■□□□□ 0.56
SPSB3-208ENST00000566339 COLCA1Q6ZS62 124 aa18.56■□□□□ 0.56
SPSB3-208ENST00000566339 AAED1Q7RTV5 226 aa18.56■□□□□ 0.56
SPSB3-208ENST00000566339 PLPPR1Q8TBJ4 325 aa18.56■□□□□ 0.56
SPSB3-208ENST00000566339 CLDN23Q96B33 292 aa18.56■□□□□ 0.56
SPSB3-208ENST00000566339 PSMG3Q9BT73 122 aaPredicted RBP18.56■□□□□ 0.56
SPSB3-208ENST00000566339 PARD6GQ9BYG4 376 aaPredicted RBP18.56■□□□□ 0.56
SPSB3-208ENST00000566339 SRXN1Q9BYN0 137 aa18.56■□□□□ 0.56
SPSB3-208ENST00000566339 CRLF2Q9HC73 371 aa18.56■□□□□ 0.56
SPSB3-208ENST00000566339 TNFSF11O14788 317 aa18.55■□□□□ 0.56
SPSB3-208ENST00000566339 OR7C1O76099 320 aaPredicted RBP18.55■□□□□ 0.56
SPSB3-208ENST00000566339 NDUFA6P56556 154 aa18.55■□□□□ 0.56
SPSB3-208ENST00000566339 ODF3L1Q8IXM7 274 aa18.55■□□□□ 0.56
SPSB3-208ENST00000566339 ZNF611Q8N823 705 aa18.55■□□□□ 0.56
SPSB3-208ENST00000566339 MBD3L1Q8WWY6 194 aa18.55■□□□□ 0.56
SPSB3-208ENST00000566339 SLAMF9Q96A28 289 aa18.55■□□□□ 0.56
SPSB3-208ENST00000566339 ZNF837Q96EG3 531 aaPredicted RBP18.55■□□□□ 0.56
SPSB3-208ENST00000566339 SGCZQ96LD1 299 aa18.55■□□□□ 0.56
SPSB3-208ENST00000566339 CTDSP1Q9GZU7 261 aa18.55■□□□□ 0.56
SPSB3-208ENST00000566339 PLK3Q9H4B4 646 aa18.55■□□□□ 0.56
SPSB3-208ENST00000566339 MRPS18CQ9Y3D5 142 aaKnown RBP18.55■□□□□ 0.56
SPSB3-208ENST00000566339 RNF115Q9Y4L5 304 aa18.55■□□□□ 0.56
SPSB3-208ENST00000566339 A0A1W2PQM1 296 aa18.55■□□□□ 0.56
SPSB3-208ENST00000566339 FAM221AA4D161 298 aa18.55■□□□□ 0.56
SPSB3-208ENST00000566339 CDRT15L2A8MXV6 281 aa18.55■□□□□ 0.56
SPSB3-208ENST00000566339 HAGHQ16775 308 aa18.55■□□□□ 0.56
SPSB3-208ENST00000566339 PYY3Q5JQD4 70 aa18.55■□□□□ 0.56
SPSB3-208ENST00000566339 CYB561D1Q8N8Q1 229 aa18.55■□□□□ 0.56
SPSB3-208ENST00000566339 PIGCQ92535 297 aa18.55■□□□□ 0.56
SPSB3-208ENST00000566339 RCC1LQ96I51 464 aaKnown RBP18.55■□□□□ 0.56
SPSB3-208ENST00000566339 CCDC74BQ96LY2 380 aa18.55■□□□□ 0.56
SPSB3-208ENST00000566339 ATP23Q9Y6H3 246 aa18.55■□□□□ 0.56
SPSB3-208ENST00000566339 CACNA1EQ15878 2313 aa18.54■□□□□ 0.56
SPSB3-208ENST00000566339 LY6G6EA0A0G2JKS1 128 aa18.54■□□□□ 0.56
SPSB3-208ENST00000566339 SLC22A20A6NK97 555 aa18.54■□□□□ 0.56
SPSB3-208ENST00000566339 PPP1R2P9O14990 202 aa18.54■□□□□ 0.56
SPSB3-208ENST00000566339 LAMTOR5O43504 91 aa18.54■□□□□ 0.56
SPSB3-208ENST00000566339 PTBP3O95758 552 aaKnown RBP18.54■□□□□ 0.56
SPSB3-208ENST00000566339 ITGA3P26006 1051 aa18.54■□□□□ 0.56
SPSB3-208ENST00000566339 B3GALT5-AS1P59052 145 aa18.54■□□□□ 0.56
SPSB3-208ENST00000566339 CCL7P80098 99 aa18.54■□□□□ 0.56
SPSB3-208ENST00000566339 DAZAP2Q15038 168 aaPredicted RBP18.54■□□□□ 0.56
SPSB3-208ENST00000566339 CXorf66Q5JRM2 361 aaPredicted RBP18.54■□□□□ 0.56
SPSB3-208ENST00000566339 SPIN3Q5JUX0 258 aa18.54■□□□□ 0.56
SPSB3-208ENST00000566339 C1orf87Q8N0U7 546 aa18.54■□□□□ 0.56
SPSB3-208ENST00000566339 ABHD14AQ9BUJ0 271 aa18.54■□□□□ 0.56
SPSB3-208ENST00000566339 U3KQA8 63 aa18.54■□□□□ 0.56
SPSB3-208ENST00000566339 CABIN1Q9Y6J0 2220 aa18.54■□□□□ 0.56
SPSB3-208ENST00000566339 RIF1Q5UIP0 2472 aaKnown RBP18.54■□□□□ 0.56
SPSB3-208ENST00000566339 TNRC6BQ9UPQ9 1833 aaKnown RBP18.53■□□□□ 0.56
SPSB3-208ENST00000566339 IFITM10A6NMD0 228 aa18.53■□□□□ 0.56
SPSB3-208ENST00000566339 H0YL77 283 aa18.53■□□□□ 0.56
SPSB3-208ENST00000566339 YIF1AO95070 293 aa18.53■□□□□ 0.56
SPSB3-208ENST00000566339 ZNF205O95201 554 aa18.53■□□□□ 0.56
SPSB3-208ENST00000566339 CYB5R3P00387 301 aaPredicted RBP18.53■□□□□ 0.56
SPSB3-208ENST00000566339 IFNA10P01566 189 aa18.53■□□□□ 0.56
SPSB3-208ENST00000566339 GLI4P10075 376 aa18.53■□□□□ 0.56
SPSB3-208ENST00000566339 COX6A1P12074 109 aa18.53■□□□□ 0.56
SPSB3-208ENST00000566339 NOVA1P51513 510 aaKnown RBP18.53■□□□□ 0.56
SPSB3-208ENST00000566339 MLF1P58340 268 aa18.53■□□□□ 0.56
SPSB3-208ENST00000566339 NKX6-1P78426 367 aaPredicted RBP18.53■□□□□ 0.56
SPSB3-208ENST00000566339 ZNF818PQ6ZRF7 136 aa18.53■□□□□ 0.56
SPSB3-208ENST00000566339 OR2V1Q8NHB1 315 aa18.53■□□□□ 0.56
SPSB3-208ENST00000566339 TMEM45BQ96B21 275 aa18.53■□□□□ 0.56
SPSB3-208ENST00000566339 PFDN5Q99471 154 aa18.53■□□□□ 0.56
SPSB3-208ENST00000566339 KIAA1549Q9HCM3 1950 aa18.53■□□□□ 0.56
SPSB3-208ENST00000566339 CLDN34H7C241 214 aa18.53■□□□□ 0.56
SPSB3-208ENST00000566339 K7ESF4 209 aa18.53■□□□□ 0.56
SPSB3-208ENST00000566339 HIST1H2BKO60814 126 aa18.53■□□□□ 0.56
SPSB3-208ENST00000566339 HIST1H2BJP06899 126 aa18.53■□□□□ 0.56
SPSB3-208ENST00000566339 CXCL1P09341 107 aa18.53■□□□□ 0.56
SPSB3-208ENST00000566339 COX5BP10606 129 aa18.53■□□□□ 0.56
SPSB3-208ENST00000566339 HIST1H1BP16401 226 aaKnown RBP18.53■□□□□ 0.56
SPSB3-208ENST00000566339 HIST1H2BOP23527 126 aa18.53■□□□□ 0.56
SPSB3-208ENST00000566339 EPHA8P29322 1005 aaPredicted RBP18.53■□□□□ 0.56
SPSB3-208ENST00000566339 HIST1H2BBP33778 126 aa18.53■□□□□ 0.56
SPSB3-208ENST00000566339 CARD18P57730 90 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms