RNA–Protein interactions for RNA: ENST00000566078.1

CTCF-203, Transcript of CCCTC-binding factor, humanhuman

TSL 2

Gene CTCF, Length 1,627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-203ENST00000566078 KRBOX4Q5JUW0 171 aa25.49■■□□□ 1.67
CTCF-203ENST00000566078 ATPAF1Q5TC12 328 aaPredicted RBP25.49■■□□□ 1.67
CTCF-203ENST00000566078 Q6ZS49 121 aa25.49■■□□□ 1.67
CTCF-203ENST00000566078 TMEM185AQ8NFB2 350 aa25.49■■□□□ 1.67
CTCF-203ENST00000566078 OR51S1Q8NGJ8 323 aa25.49■■□□□ 1.67
CTCF-203ENST00000566078 DNTTIP1Q9H147 329 aa25.49■■□□□ 1.67
CTCF-203ENST00000566078 KIF25Q9UIL4 384 aa25.49■■□□□ 1.67
CTCF-203ENST00000566078 MGST3O14880 152 aa25.48■■□□□ 1.67
CTCF-203ENST00000566078 SIGLEC5O15389 551 aa25.48■■□□□ 1.67
CTCF-203ENST00000566078 ZNF735P0CB33 412 aa25.48■■□□□ 1.67
CTCF-203ENST00000566078 IL13RA1P78552 427 aa25.48■■□□□ 1.67
CTCF-203ENST00000566078 KCNJ8Q15842 424 aa25.48■■□□□ 1.67
CTCF-203ENST00000566078 VAX1Q5SQQ9 334 aa25.48■■□□□ 1.67
CTCF-203ENST00000566078 Q6ZNX1 250 aa25.48■■□□□ 1.67
CTCF-203ENST00000566078 MOB1BQ7L9L4 216 aa25.48■■□□□ 1.67
CTCF-203ENST00000566078 PEG10Q86TG7 708 aaKnown RBP25.48■■□□□ 1.67
CTCF-203ENST00000566078 DUSP18Q8NEJ0 188 aa25.48■■□□□ 1.67
CTCF-203ENST00000566078 SLC6A7Q99884 636 aa25.48■■□□□ 1.67
CTCF-203ENST00000566078 TRAPPC2LQ9UL33 140 aa25.48■■□□□ 1.67
CTCF-203ENST00000566078 TMPRSS2O15393 492 aa25.48■■□□□ 1.67
CTCF-203ENST00000566078 F12P00748 615 aaPredicted RBP25.48■■□□□ 1.67
CTCF-203ENST00000566078 IFNA6P05013 189 aa25.48■■□□□ 1.67
CTCF-203ENST00000566078 RCC1P18754 421 aaPredicted RBP25.48■■□□□ 1.67
CTCF-203ENST00000566078 EFNA4P52798 201 aa25.48■■□□□ 1.67
CTCF-203ENST00000566078 CDK10Q15131 360 aa25.48■■□□□ 1.67
CTCF-203ENST00000566078 TMEM246Q9BRR3 403 aa25.48■■□□□ 1.67
CTCF-203ENST00000566078 EHFQ9NZC4 300 aa25.48■■□□□ 1.67
CTCF-203ENST00000566078 TRAV39A0A0B4J263 110 aa25.47■■□□□ 1.67
CTCF-203ENST00000566078 A0A1B0GVG6 124 aa25.47■■□□□ 1.67
CTCF-203ENST00000566078 PLET1Q6UQ28 207 aa25.47■■□□□ 1.67
CTCF-203ENST00000566078 TPRX1Q8N7U7 411 aa25.47■■□□□ 1.67
CTCF-203ENST00000566078 MEIKINA0A087WXM9 373 aa25.46■■□□□ 1.67
CTCF-203ENST00000566078 POM121CA8CG34 1229 aa25.46■■□□□ 1.67
CTCF-203ENST00000566078 SDCBPO00560 298 aaPredicted RBP25.46■■□□□ 1.67
CTCF-203ENST00000566078 IGHV2-70P01814 119 aa25.46■■□□□ 1.67
CTCF-203ENST00000566078 GSTT2P0CG29 244 aa25.46■■□□□ 1.67
CTCF-203ENST00000566078 GLIPR1P48060 266 aa25.46■■□□□ 1.67
CTCF-203ENST00000566078 PAX5Q02548 391 aa25.46■■□□□ 1.67
CTCF-203ENST00000566078 SCGB2B2Q4G0G5 96 aa25.46■■□□□ 1.67
CTCF-203ENST00000566078 AVPI1Q5T686 147 aa25.46■■□□□ 1.67
CTCF-203ENST00000566078 SLC36A1Q7Z2H8 476 aa25.46■■□□□ 1.67
CTCF-203ENST00000566078 OR5D13Q8NGL4 314 aa25.46■■□□□ 1.67
CTCF-203ENST00000566078 C14orf79Q96F83 325 aa25.46■■□□□ 1.67
CTCF-203ENST00000566078 MED30Q96HR3 178 aa25.46■■□□□ 1.67
CTCF-203ENST00000566078 FAM234AQ9H0X4 552 aa25.46■■□□□ 1.67
CTCF-203ENST00000566078 CHODLQ9H9P2 273 aa25.46■■□□□ 1.67
CTCF-203ENST00000566078 COPZ2Q9P299 210 aa25.46■■□□□ 1.67
CTCF-203ENST00000566078 KIR2DS1A0A191URI9 304 aa25.45■■□□□ 1.67
CTCF-203ENST00000566078 TRDCB7Z8K6 153 aa25.45■■□□□ 1.67
CTCF-203ENST00000566078 TNFRSF13BO14836 293 aaPredicted RBP25.45■■□□□ 1.67
CTCF-203ENST00000566078 ADAM20O43506 726 aa25.45■■□□□ 1.67
CTCF-203ENST00000566078 KIR2DS4P43632 304 aa25.45■■□□□ 1.67
CTCF-203ENST00000566078 HLA-DRB3P79483 266 aa25.45■■□□□ 1.67
CTCF-203ENST00000566078 KIR2DS1Q14954 304 aa25.45■■□□□ 1.67
CTCF-203ENST00000566078 LYPD2Q6UXB3 125 aa25.45■■□□□ 1.67
CTCF-203ENST00000566078 C5orf24Q7Z6I8 188 aa25.45■■□□□ 1.67
CTCF-203ENST00000566078 NECAP2Q9NVZ3 263 aa25.45■■□□□ 1.67
CTCF-203ENST00000566078 SCP2D1Q9UJQ7 156 aa25.45■■□□□ 1.67
CTCF-203ENST00000566078 TACC2O95359 2948 aa25.45■■□□□ 1.66
CTCF-203ENST00000566078 PPIHO43447 177 aaKnown RBP25.45■■□□□ 1.66
CTCF-203ENST00000566078 TCRBP04435 133 aa25.45■■□□□ 1.66
CTCF-203ENST00000566078 CARTPTQ16568 116 aa25.45■■□□□ 1.66
CTCF-203ENST00000566078 OVCH2Q7RTZ1 564 aa25.45■■□□□ 1.66
CTCF-203ENST00000566078 UPRTQ96BW1 309 aa25.45■■□□□ 1.66
CTCF-203ENST00000566078 TIMD4Q96H15 378 aa25.45■■□□□ 1.66
CTCF-203ENST00000566078 PRRT1Q99946 306 aa25.45■■□□□ 1.66
CTCF-203ENST00000566078 GCN1Q92616 2671 aaKnown RBP25.44■■□□□ 1.66
CTCF-203ENST00000566078 FABP7O15540 132 aa25.44■■□□□ 1.66
CTCF-203ENST00000566078 FSTL3O95633 263 aa25.44■■□□□ 1.66
CTCF-203ENST00000566078 EDDM3BP56851 147 aa25.44■■□□□ 1.66
CTCF-203ENST00000566078 IDO2Q6ZQW0 420 aa25.44■■□□□ 1.66
CTCF-203ENST00000566078 ARRDC1Q8N5I2 433 aa25.44■■□□□ 1.66
CTCF-203ENST00000566078 MBNL3Q9NUK0 354 aaKnown RBP25.44■■□□□ 1.66
CTCF-203ENST00000566078 SLC2A8Q9NY64 477 aa25.44■■□□□ 1.66
CTCF-203ENST00000566078 MGAT4AQ9UM21 535 aa25.44■■□□□ 1.66
CTCF-203ENST00000566078 NUBP2Q9Y5Y2 271 aa25.44■■□□□ 1.66
CTCF-203ENST00000566078 DOCK11Q5JSL3 2073 aa25.44■■□□□ 1.66
CTCF-203ENST00000566078 NDUFA2O43678 99 aa25.43■■□□□ 1.66
CTCF-203ENST00000566078 SCTP09683 121 aa25.43■■□□□ 1.66
CTCF-203ENST00000566078 P2RX3P56373 397 aa25.43■■□□□ 1.66
CTCF-203ENST00000566078 TSPAN5P62079 268 aa25.43■■□□□ 1.66
CTCF-203ENST00000566078 RAB1CQ92928 201 aa25.43■■□□□ 1.66
CTCF-203ENST00000566078 PSMG3-AS1Q96PY0 264 aa25.43■■□□□ 1.66
CTCF-203ENST00000566078 GINS4Q9BRT9 223 aa25.43■■□□□ 1.66
CTCF-203ENST00000566078 NUDT15Q9NV35 164 aa25.43■■□□□ 1.66
CTCF-203ENST00000566078 RBMS2Q15434 407 aaKnown RBP25.42■■□□□ 1.66
CTCF-203ENST00000566078 MUC20Q8N307 709 aaPredicted RBP25.42■■□□□ 1.66
CTCF-203ENST00000566078 FGFRL1Q8N441 504 aa25.42■■□□□ 1.66
CTCF-203ENST00000566078 LIME1Q9H400 295 aa25.42■■□□□ 1.66
CTCF-203ENST00000566078 KAAG1Q9UBP8 84 aa25.42■■□□□ 1.66
CTCF-203ENST00000566078 SLC25A10Q9UBX3 287 aaPredicted RBP25.42■■□□□ 1.66
CTCF-203ENST00000566078 TRAV6A0A075B6T7 132 aa25.41■■□□□ 1.66
CTCF-203ENST00000566078 ODAMA1E959 279 aa25.41■■□□□ 1.66
CTCF-203ENST00000566078 NDUFB6O95139 128 aa25.41■■□□□ 1.66
CTCF-203ENST00000566078 IGSF11Q5DX21 431 aa25.41■■□□□ 1.66
CTCF-203ENST00000566078 BTN2A1Q7KYR7 527 aa25.41■■□□□ 1.66
CTCF-203ENST00000566078 TMEM17Q86X19 198 aa25.41■■□□□ 1.66
CTCF-203ENST00000566078 CREB3L1Q96BA8 519 aa25.41■■□□□ 1.66
CTCF-203ENST00000566078 C20orf85Q9H1P6 137 aa25.41■■□□□ 1.66
CTCF-203ENST00000566078 CTSZQ9UBR2 303 aa25.41■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms