RNA–Protein interactions for RNA: ENST00000565931.1

RNF40-207, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-207ENST00000565931 ABCA1O95477 2261 aa13.69□□□□□ -0.22
RNF40-207ENST00000565931 TRGV10A0A0A0MS01 117 aa13.68□□□□□ -0.22
RNF40-207ENST00000565931 A0A1W2PPH5 198 aa13.68□□□□□ -0.22
RNF40-207ENST00000565931 C17orf98A8MV24 154 aa13.68□□□□□ -0.22
RNF40-207ENST00000565931 M0R1W7 72 aa13.68□□□□□ -0.22
RNF40-207ENST00000565931 TOX4O94842 621 aa13.68□□□□□ -0.22
RNF40-207ENST00000565931 ZNF728P0DKX0 622 aa13.68□□□□□ -0.22
RNF40-207ENST00000565931 CGB3P0DN86 165 aa13.68□□□□□ -0.22
RNF40-207ENST00000565931 CGB7P0DN87 165 aa13.68□□□□□ -0.22
RNF40-207ENST00000565931 SOX6P35712 828 aa13.68□□□□□ -0.22
RNF40-207ENST00000565931 FAM120AOSQ5T036 256 aa13.68□□□□□ -0.22
RNF40-207ENST00000565931 METTL11BQ5VVY1 283 aa13.68□□□□□ -0.22
RNF40-207ENST00000565931 C1orf122Q6ZSJ8 110 aa13.68□□□□□ -0.22
RNF40-207ENST00000565931 CMTM4Q8IZR5 234 aa13.68□□□□□ -0.22
RNF40-207ENST00000565931 OR13A1Q8NGR1 328 aa13.68□□□□□ -0.22
RNF40-207ENST00000565931 AP3S1Q92572 193 aa13.68□□□□□ -0.22
RNF40-207ENST00000565931 UPRTQ96BW1 309 aa13.68□□□□□ -0.22
RNF40-207ENST00000565931 DGCR14Q96DF8 476 aaKnown RBP13.68□□□□□ -0.22
RNF40-207ENST00000565931 TBX15Q96SF7 602 aa13.68□□□□□ -0.22
RNF40-207ENST00000565931 ABCG5Q9H222 651 aa13.68□□□□□ -0.22
RNF40-207ENST00000565931 TAS2R3Q9NYW6 316 aa13.68□□□□□ -0.22
RNF40-207ENST00000565931 CCDC59Q9P031 241 aaKnown RBP13.68□□□□□ -0.22
RNF40-207ENST00000565931 KCNK7Q9Y2U2 307 aa13.68□□□□□ -0.22
RNF40-207ENST00000565931 TRAV39A0A0B4J263 110 aa13.67□□□□□ -0.22
RNF40-207ENST00000565931 MFNGO00587 321 aa13.67□□□□□ -0.22
RNF40-207ENST00000565931 SCGNO76038 276 aa13.67□□□□□ -0.22
RNF40-207ENST00000565931 HIST1H1DP16402 221 aaKnown RBP13.67□□□□□ -0.22
RNF40-207ENST00000565931 MZT2AQ6P582 158 aa13.67□□□□□ -0.22
RNF40-207ENST00000565931 TRAPPC6BQ86SZ2 158 aa13.67□□□□□ -0.22
RNF40-207ENST00000565931 SAMD12Q8N8I0 201 aa13.67□□□□□ -0.22
RNF40-207ENST00000565931 ZNF565Q8N9K5 539 aa13.67□□□□□ -0.22
RNF40-207ENST00000565931 MRPL30Q8TCC3 161 aaKnown RBP13.67□□□□□ -0.22
RNF40-207ENST00000565931 CMTM3Q96MX0 182 aa13.67□□□□□ -0.22
RNF40-207ENST00000565931 ZNF714Q96N38 554 aa13.67□□□□□ -0.22
RNF40-207ENST00000565931 PCGF1Q9BSM1 259 aa13.67□□□□□ -0.22
RNF40-207ENST00000565931 AK3Q9UIJ7 227 aa13.67□□□□□ -0.22
RNF40-207ENST00000565931 INAFM1C9JVW0 142 aa13.66□□□□□ -0.22
RNF40-207ENST00000565931 GNB3P16520 340 aa13.66□□□□□ -0.22
RNF40-207ENST00000565931 PRTN3P24158 256 aa13.66□□□□□ -0.22
RNF40-207ENST00000565931 GLP1RP43220 463 aa13.66□□□□□ -0.22
RNF40-207ENST00000565931 ERVFRD-1P60508 538 aa13.66□□□□□ -0.22
RNF40-207ENST00000565931 C17orf58Q2M2W7 97 aa13.66□□□□□ -0.22
RNF40-207ENST00000565931 UBE2NLQ5JXB2 153 aa13.66□□□□□ -0.22
RNF40-207ENST00000565931 FOXB2Q5VYV0 432 aa13.66□□□□□ -0.22
RNF40-207ENST00000565931 OLFML2AQ68BL7 652 aa13.66□□□□□ -0.22
RNF40-207ENST00000565931 OR4K15Q8NH41 348 aa13.66□□□□□ -0.22
RNF40-207ENST00000565931 MRGPRDQ8TDS7 321 aa13.66□□□□□ -0.22
RNF40-207ENST00000565931 CCDC107Q8WV48 283 aa13.66□□□□□ -0.22
RNF40-207ENST00000565931 SLIRPQ9GZT3 109 aaKnown RBP13.66□□□□□ -0.22
RNF40-207ENST00000565931 UNKLQ9H9P5 680 aaKnown RBP13.66□□□□□ -0.22
RNF40-207ENST00000565931 ZMAT3Q9HA38 289 aaKnown RBP13.66□□□□□ -0.22
RNF40-207ENST00000565931 ARHGAP32A7KAX9 2087 aa13.65□□□□□ -0.22
RNF40-207ENST00000565931 A0A0A6YYH2 397 aa13.65□□□□□ -0.22
RNF40-207ENST00000565931 A6NHS1 94 aa13.65□□□□□ -0.22
RNF40-207ENST00000565931 A6NJ64 397 aa13.65□□□□□ -0.22
RNF40-207ENST00000565931 ZNF729A6NN14 1252 aaPredicted RBP13.65□□□□□ -0.22
RNF40-207ENST00000565931 NAPSAO96009 420 aa13.65□□□□□ -0.22
RNF40-207ENST00000565931 FSHBP01225 129 aa13.65□□□□□ -0.22
RNF40-207ENST00000565931 APOA1P02647 267 aa13.65□□□□□ -0.22
RNF40-207ENST00000565931 RBP4P02753 201 aa13.65□□□□□ -0.22
RNF40-207ENST00000565931 GZMHP20718 246 aa13.65□□□□□ -0.22
RNF40-207ENST00000565931 DLX1P56177 255 aa13.65□□□□□ -0.22
RNF40-207ENST00000565931 ARL6IP1Q15041 203 aa13.65□□□□□ -0.22
RNF40-207ENST00000565931 ZNF260Q3ZCT1 412 aa13.65□□□□□ -0.22
RNF40-207ENST00000565931 CDNFQ49AH0 187 aa13.65□□□□□ -0.22
RNF40-207ENST00000565931 KLF17Q5JT82 389 aaPredicted RBP13.65□□□□□ -0.22
RNF40-207ENST00000565931 IL17RELQ6ZVW7 336 aa13.65□□□□□ -0.22
RNF40-207ENST00000565931 VMO1Q7Z5L0 202 aa13.65□□□□□ -0.22
RNF40-207ENST00000565931 TEX29Q8N6K0 151 aa13.65□□□□□ -0.22
RNF40-207ENST00000565931 TNFRSF14Q92956 283 aa13.65□□□□□ -0.22
RNF40-207ENST00000565931 PHF21AQ96BD5 680 aa13.65□□□□□ -0.22
RNF40-207ENST00000565931 S100A16Q96FQ6 103 aaKnown RBP13.65□□□□□ -0.22
RNF40-207ENST00000565931 HDHD3Q9BSH5 251 aaPredicted RBP13.65□□□□□ -0.22
RNF40-207ENST00000565931 RIMS4Q9H426 269 aaPredicted RBP13.65□□□□□ -0.22
RNF40-207ENST00000565931 METTL8Q9H825 291 aaKnown RBP13.65□□□□□ -0.22
RNF40-207ENST00000565931 LINC00574Q9H8X3 128 aa13.65□□□□□ -0.22
RNF40-207ENST00000565931 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.65□□□□□ -0.22
RNF40-207ENST00000565931 DIABLOQ9NR28 239 aa13.65□□□□□ -0.22
RNF40-207ENST00000565931 SIRT7Q9NRC8 400 aa13.65□□□□□ -0.22
RNF40-207ENST00000565931 MBNL3Q9NUK0 354 aaKnown RBP13.65□□□□□ -0.22
RNF40-207ENST00000565931 CALYQ9NYX4 217 aa13.65□□□□□ -0.22
RNF40-207ENST00000565931 TRAPPC2LQ9UL33 140 aa13.65□□□□□ -0.22
RNF40-207ENST00000565931 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.65□□□□□ -0.222e-7■■□□□ 14.2
RNF40-207ENST00000565931 A0A075B6Q4 140 aa13.64□□□□□ -0.23
RNF40-207ENST00000565931 TRAV18A0A075B6X5 111 aa13.64□□□□□ -0.23
RNF40-207ENST00000565931 KBTBD11-OT1A0A1B0GTJ5 212 aa13.64□□□□□ -0.23
RNF40-207ENST00000565931 hCG_1809904A0A1W2PP81 198 aa13.64□□□□□ -0.23
RNF40-207ENST00000565931 A0A1W2PPE2 198 aa13.64□□□□□ -0.23
RNF40-207ENST00000565931 A0A1W2PR64 198 aa13.64□□□□□ -0.23
RNF40-207ENST00000565931 A0A1W2PRV1 198 aa13.64□□□□□ -0.23
RNF40-207ENST00000565931 SERPINE3A8MV23 424 aa13.64□□□□□ -0.23
RNF40-207ENST00000565931 HPGDSO60760 199 aa13.64□□□□□ -0.23
RNF40-207ENST00000565931 MMP23AO75900 390 aa13.64□□□□□ -0.23
RNF40-207ENST00000565931 EIF4EP06730 217 aaKnown RBP13.64□□□□□ -0.23
RNF40-207ENST00000565931 CDK2P24941 298 aa13.64□□□□□ -0.23
RNF40-207ENST00000565931 Q6ZPA2 131 aa13.64□□□□□ -0.23
RNF40-207ENST00000565931 NANPQ8TBE9 248 aa13.64□□□□□ -0.23
RNF40-207ENST00000565931 CMSS1Q9BQ75 279 aaKnown RBP13.64□□□□□ -0.23
RNF40-207ENST00000565931 DCUN1D5Q9BTE7 237 aa13.64□□□□□ -0.23
RNF40-207ENST00000565931 GAL3ST2Q9H3Q3 398 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms