RNA–Protein interactions for RNA: ENST00000565517.5

COMMD4-212, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 536 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-212ENST00000565517 VPREB3Q9UKI3 123 aa12.52□□□□□ -0.41
COMMD4-212ENST00000565517 MMP24Q9Y5R2 645 aa12.52□□□□□ -0.41
COMMD4-212ENST00000565517 MINOS1-NBL1R4GNA1 71 aa12.52□□□□□ -0.41
COMMD4-212ENST00000565517 TENM1Q9UKZ4 2725 aa12.51□□□□□ -0.41
COMMD4-212ENST00000565517 KBTBD11-OT1A0A1B0GTJ5 212 aa12.51□□□□□ -0.41
COMMD4-212ENST00000565517 A0A1B0GUS0 222 aa12.51□□□□□ -0.41
COMMD4-212ENST00000565517 POM121CA8CG34 1229 aa12.51□□□□□ -0.41
COMMD4-212ENST00000565517 VGLL3A8MV65 326 aa12.51□□□□□ -0.41
COMMD4-212ENST00000565517 NDUFA7O95182 113 aa12.51□□□□□ -0.41
COMMD4-212ENST00000565517 MGMTP16455 207 aa12.51□□□□□ -0.41
COMMD4-212ENST00000565517 CDK2P24941 298 aa12.51□□□□□ -0.41
COMMD4-212ENST00000565517 CFPP27918 469 aa12.51□□□□□ -0.41
COMMD4-212ENST00000565517 CD34P28906 385 aa12.51□□□□□ -0.41
COMMD4-212ENST00000565517 C17orf58Q2M2W7 97 aa12.51□□□□□ -0.41
COMMD4-212ENST00000565517 LRRC75BQ2VPJ9 315 aa12.51□□□□□ -0.41
COMMD4-212ENST00000565517 ATAD3CQ5T2N8 411 aa12.51□□□□□ -0.41
COMMD4-212ENST00000565517 LHFPL4Q7Z7J7 247 aa12.51□□□□□ -0.41
COMMD4-212ENST00000565517 CST11Q9H112 138 aa12.51□□□□□ -0.41
COMMD4-212ENST00000565517 C1RLQ9NZP8 487 aa12.51□□□□□ -0.41
COMMD4-212ENST00000565517 ZNF581Q9P0T4 197 aa12.51□□□□□ -0.41
COMMD4-212ENST00000565517 RCC2Q9P258 522 aaKnown RBP12.51□□□□□ -0.41
COMMD4-212ENST00000565517 A0A087X0M5 115 aa12.5□□□□□ -0.41
COMMD4-212ENST00000565517 A0A1B0GX30 115 aa12.5□□□□□ -0.41
COMMD4-212ENST00000565517 MCRIP1C9JLW8 97 aa12.5□□□□□ -0.41
COMMD4-212ENST00000565517 SLC22A1O15245 554 aa12.5□□□□□ -0.41
COMMD4-212ENST00000565517 CRTAPO75718 401 aaPredicted RBP12.5□□□□□ -0.41
COMMD4-212ENST00000565517 GLAP06280 429 aa12.5□□□□□ -0.41
COMMD4-212ENST00000565517 GZMHP20718 246 aa12.5□□□□□ -0.41
COMMD4-212ENST00000565517 FABP5Q01469 135 aa12.5□□□□□ -0.41
COMMD4-212ENST00000565517 DYNC1I2Q13409 638 aaKnown RBP12.5□□□□□ -0.41
COMMD4-212ENST00000565517 RBM39Q14498 530 aaKnown RBP12.5□□□□□ -0.41
COMMD4-212ENST00000565517 SSX1Q16384 188 aa12.5□□□□□ -0.41
COMMD4-212ENST00000565517 PRAMEF5Q5TYX0 476 aa12.5□□□□□ -0.41
COMMD4-212ENST00000565517 UBE2UQ5VVX9 321 aa12.5□□□□□ -0.41
COMMD4-212ENST00000565517 SPARTQ8N0X7 666 aa12.5□□□□□ -0.41
COMMD4-212ENST00000565517 ABHD12Q8N2K0 398 aa12.5□□□□□ -0.41
COMMD4-212ENST00000565517 TMEM104Q8NE00 496 aa12.5□□□□□ -0.41
COMMD4-212ENST00000565517 OR10A7Q8NGE5 316 aa12.5□□□□□ -0.41
COMMD4-212ENST00000565517 OR13A1Q8NGR1 328 aa12.5□□□□□ -0.41
COMMD4-212ENST00000565517 OR4F5Q8NH21 305 aa12.5□□□□□ -0.41
COMMD4-212ENST00000565517 ZNF596Q8TC21 504 aa12.5□□□□□ -0.41
COMMD4-212ENST00000565517 Q96M66 194 aa12.5□□□□□ -0.41
COMMD4-212ENST00000565517 SELENOIQ9C0D9 397 aa12.5□□□□□ -0.41
COMMD4-212ENST00000565517 BANF2Q9H503 90 aa12.5□□□□□ -0.41
COMMD4-212ENST00000565517 TMEM30CPA0ZSE6 113 aa12.49□□□□□ -0.41
COMMD4-212ENST00000565517 NPIPB11E5RHQ5 1161 aa12.49□□□□□ -0.41
COMMD4-212ENST00000565517 H3BUX3 64 aa12.49□□□□□ -0.41
COMMD4-212ENST00000565517 FUT3P21217 361 aa12.49□□□□□ -0.41
COMMD4-212ENST00000565517 GALP22466 123 aa12.49□□□□□ -0.41
COMMD4-212ENST00000565517 OMGP23515 440 aa12.49□□□□□ -0.41
COMMD4-212ENST00000565517 HTR2CP28335 458 aa12.49□□□□□ -0.41
COMMD4-212ENST00000565517 GLP1RP43220 463 aa12.49□□□□□ -0.41
COMMD4-212ENST00000565517 RANBP1P43487 201 aa12.49□□□□□ -0.41
COMMD4-212ENST00000565517 RELBQ01201 579 aa12.49□□□□□ -0.41
COMMD4-212ENST00000565517 LDLRAD2Q5SZI1 272 aa12.49□□□□□ -0.41
COMMD4-212ENST00000565517 CD200R1LQ6Q8B3 271 aa12.49□□□□□ -0.41
COMMD4-212ENST00000565517 OR6M1Q8NGM8 313 aa12.49□□□□□ -0.41
COMMD4-212ENST00000565517 KCNG3Q8TAE7 436 aa12.49□□□□□ -0.41
COMMD4-212ENST00000565517 FCGR1BQ92637 280 aa12.49□□□□□ -0.41
COMMD4-212ENST00000565517 ZNF747Q9BV97 191 aa12.49□□□□□ -0.41
COMMD4-212ENST00000565517 BEX1Q9HBH7 125 aa12.49□□□□□ -0.41
COMMD4-212ENST00000565517 NDUFB11Q9NX14 153 aa12.49□□□□□ -0.41
COMMD4-212ENST00000565517 CALYQ9NYX4 217 aa12.49□□□□□ -0.41
COMMD4-212ENST00000565517 ANK2Q01484 3957 aa12.48□□□□□ -0.41
COMMD4-212ENST00000565517 CA11O75493 328 aa12.48□□□□□ -0.41
COMMD4-212ENST00000565517 IL1AP01583 271 aa12.48□□□□□ -0.41
COMMD4-212ENST00000565517 IGLV1-47P01700 117 aa12.48□□□□□ -0.41
COMMD4-212ENST00000565517 MT-ND4P03905 459 aa12.48□□□□□ -0.41
COMMD4-212ENST00000565517 VSIG8P0DPA2 414 aa12.48□□□□□ -0.41
COMMD4-212ENST00000565517 HTR1DP28221 377 aa12.48□□□□□ -0.41
COMMD4-212ENST00000565517 GDNFP39905 211 aa12.48□□□□□ -0.41
COMMD4-212ENST00000565517 PSMD7P51665 324 aa12.48□□□□□ -0.41
COMMD4-212ENST00000565517 DYNLT3P51808 116 aa12.48□□□□□ -0.41
COMMD4-212ENST00000565517 PRRX1P54821 245 aa12.48□□□□□ -0.41
COMMD4-212ENST00000565517 RAG2P55895 527 aa12.48□□□□□ -0.41
COMMD4-212ENST00000565517 SSX2Q16385 188 aa12.48□□□□□ -0.41
COMMD4-212ENST00000565517 RAB12Q6IQ22 244 aa12.48□□□□□ -0.41
COMMD4-212ENST00000565517 BAIAP2L2Q6UXY1 529 aa12.48□□□□□ -0.41
COMMD4-212ENST00000565517 ZNF497Q6ZNH5 498 aa12.48□□□□□ -0.41
COMMD4-212ENST00000565517 LIAT1Q6ZQX7 453 aa12.48□□□□□ -0.41
COMMD4-212ENST00000565517 SLC16A12Q6ZSM3 486 aa12.48□□□□□ -0.41
COMMD4-212ENST00000565517 DYNAPQ8N1N2 210 aa12.48□□□□□ -0.41
COMMD4-212ENST00000565517 GAPTQ8N292 157 aa12.48□□□□□ -0.41
COMMD4-212ENST00000565517 OR4P4Q8NGL7 312 aa12.48□□□□□ -0.41
COMMD4-212ENST00000565517 PIFOQ8TCI5 191 aa12.48□□□□□ -0.41
COMMD4-212ENST00000565517 CREB3L1Q96BA8 519 aa12.48□□□□□ -0.41
COMMD4-212ENST00000565517 KIRREL1Q96J84 757 aa12.48□□□□□ -0.41
COMMD4-212ENST00000565517 IDI2-AS1Q9NZ38 188 aa12.48□□□□□ -0.41
COMMD4-212ENST00000565517 TRAV1-2A0A0B4J238 106 aa12.47□□□□□ -0.41
COMMD4-212ENST00000565517 TRDV1A0A1B0GX56 115 aa12.47□□□□□ -0.41
COMMD4-212ENST00000565517 CCRL2O00421 344 aa12.47□□□□□ -0.41
COMMD4-212ENST00000565517 SLC17A2O00624 439 aa12.47□□□□□ -0.41
COMMD4-212ENST00000565517 ORC5O43913 435 aa12.47□□□□□ -0.41
COMMD4-212ENST00000565517 PDCD6O75340 191 aa12.47□□□□□ -0.41
COMMD4-212ENST00000565517 BPNT1O95861 308 aa12.47□□□□□ -0.41
COMMD4-212ENST00000565517 MPIG6BO95866 241 aa12.47□□□□□ -0.41
COMMD4-212ENST00000565517 MDKP21741 143 aaPredicted RBP12.47□□□□□ -0.41
COMMD4-212ENST00000565517 CALRP27797 417 aaKnown RBP12.47□□□□□ -0.41
COMMD4-212ENST00000565517 SIGIRRQ6IA17 410 aa12.47□□□□□ -0.41
COMMD4-212ENST00000565517 DHRS7BQ6IAN0 325 aaPredicted RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 239.5 ms