RNA–Protein interactions for RNA: ENST00000565511.5

RAB40C-209, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-209ENST00000565511 GNG10P50151 68 aa18.85■□□□□ 0.61
RAB40C-209ENST00000565511 RSU1Q15404 277 aa18.85■□□□□ 0.61
RAB40C-209ENST00000565511 C9orf152Q5JTZ5 239 aa18.85■□□□□ 0.61
RAB40C-209ENST00000565511 DRAM1Q8N682 238 aa18.85■□□□□ 0.61
RAB40C-209ENST00000565511 SUMF2Q8NBJ7 301 aa18.85■□□□□ 0.61
RAB40C-209ENST00000565511 WFDC9Q8NEX5 89 aa18.85■□□□□ 0.61
RAB40C-209ENST00000565511 MRAPQ8TCY5 172 aa18.85■□□□□ 0.61
RAB40C-209ENST00000565511 SGCDQ92629 289 aa18.85■□□□□ 0.61
RAB40C-209ENST00000565511 TMEM106AQ96A25 262 aa18.85■□□□□ 0.61
RAB40C-209ENST00000565511 CYYR1Q96J86 154 aa18.85■□□□□ 0.61
RAB40C-209ENST00000565511 NCOR1P1Q9H4R4 102 aa18.85■□□□□ 0.61
RAB40C-209ENST00000565511 A0A1W2PP11 408 aa18.84■□□□□ 0.61
RAB40C-209ENST00000565511 OOSP1A8MZH6 123 aa18.84■□□□□ 0.61
RAB40C-209ENST00000565511 PAX5Q02548 391 aa18.84■□□□□ 0.61
RAB40C-209ENST00000565511 KLHL22Q53GT1 634 aa18.84■□□□□ 0.61
RAB40C-209ENST00000565511 RPL22L1Q6P5R6 122 aaKnown RBP18.84■□□□□ 0.61
RAB40C-209ENST00000565511 UBALD1Q8TB05 177 aa18.84■□□□□ 0.61
RAB40C-209ENST00000565511 GPR148Q8TDV2 347 aa18.84■□□□□ 0.61
RAB40C-209ENST00000565511 RPEQ96AT9 228 aa18.84■□□□□ 0.61
RAB40C-209ENST00000565511 CREB3L1Q96BA8 519 aa18.84■□□□□ 0.61
RAB40C-209ENST00000565511 MYCBPQ99417 103 aaPredicted RBP18.84■□□□□ 0.61
RAB40C-209ENST00000565511 DPCDQ9BVM2 203 aaPredicted RBP18.84■□□□□ 0.61
RAB40C-209ENST00000565511 CLEC2DQ9UHP7 191 aa18.84■□□□□ 0.61
RAB40C-209ENST00000565511 MOB4Q9Y3A3 225 aa18.84■□□□□ 0.61
RAB40C-209ENST00000565511 HSPE1-MOB4S4R3N1 261 aa18.84■□□□□ 0.61
RAB40C-209ENST00000565511 PF4V1P10720 104 aa18.83■□□□□ 0.6
RAB40C-209ENST00000565511 CD33P20138 364 aa18.83■□□□□ 0.6
RAB40C-209ENST00000565511 ARHGDIBP52566 201 aa18.83■□□□□ 0.6
RAB40C-209ENST00000565511 RBM11P57052 281 aaKnown RBP18.83■□□□□ 0.6
RAB40C-209ENST00000565511 DOC2BQ14184 412 aa18.83■□□□□ 0.6
RAB40C-209ENST00000565511 DDI2Q5TDH0 399 aa18.83■□□□□ 0.6
RAB40C-209ENST00000565511 CCDC144NLQ6NUI1 221 aa18.83■□□□□ 0.6
RAB40C-209ENST00000565511 REC114Q7Z4M0 266 aa18.83■□□□□ 0.6
RAB40C-209ENST00000565511 ING4Q9UNL4 249 aa18.83■□□□□ 0.6
RAB40C-209ENST00000565511 TSSC4Q9Y5U2 329 aaPredicted RBP18.83■□□□□ 0.6
RAB40C-209ENST00000565511 GEMIN2O14893 280 aaKnown RBP18.82■□□□□ 0.6
RAB40C-209ENST00000565511 MAGEB3O15480 346 aa18.82■□□□□ 0.6
RAB40C-209ENST00000565511 OGG1O15527 345 aa18.82■□□□□ 0.6
RAB40C-209ENST00000565511 MNDAP41218 407 aa18.82■□□□□ 0.6
RAB40C-209ENST00000565511 ZFP41Q8N8Y5 198 aa18.82■□□□□ 0.6
RAB40C-209ENST00000565511 RBMXL1Q96E39 390 aaKnown RBP18.82■□□□□ 0.6
RAB40C-209ENST00000565511 SMPD3Q9NY59 655 aaPredicted RBP18.82■□□□□ 0.6
RAB40C-209ENST00000565511 IL36GQ9NZH8 169 aa18.82■□□□□ 0.6
RAB40C-209ENST00000565511 ST3GAL6Q9Y274 331 aa18.82■□□□□ 0.6
RAB40C-209ENST00000565511 H3BUI4 141 aa18.81■□□□□ 0.6
RAB40C-209ENST00000565511 BAG2O95816 211 aa18.81■□□□□ 0.6
RAB40C-209ENST00000565511 IGFBP3P17936 291 aaPredicted RBP18.81■□□□□ 0.6
RAB40C-209ENST00000565511 C21orf33P30042 268 aaPredicted RBP18.81■□□□□ 0.6
RAB40C-209ENST00000565511 RPS11P62280 158 aaKnown RBP eCLIP18.81■□□□□ 0.6
RAB40C-209ENST00000565511 CCDC58Q4VC31 144 aa18.81■□□□□ 0.6
RAB40C-209ENST00000565511 NHLRC3Q5JS37 347 aa18.81■□□□□ 0.6
RAB40C-209ENST00000565511 KHDC1LQ5JSQ8 128 aa18.81■□□□□ 0.6
RAB40C-209ENST00000565511 ETV3LQ6ZN32 361 aa18.81■□□□□ 0.6
RAB40C-209ENST00000565511 C18orf65Q6ZTR6 163 aa18.81■□□□□ 0.6
RAB40C-209ENST00000565511 ZNF329Q86UD4 541 aa18.81■□□□□ 0.6
RAB40C-209ENST00000565511 C5orf56Q8N8D9 126 aa18.81■□□□□ 0.6
RAB40C-209ENST00000565511 ZNF565Q8N9K5 539 aa18.81■□□□□ 0.6
RAB40C-209ENST00000565511 NOL4LQ96MY1 436 aaPredicted RBP18.81■□□□□ 0.6
RAB40C-209ENST00000565511 BARHL1Q9BZE3 327 aa18.81■□□□□ 0.6
RAB40C-209ENST00000565511 IFT22Q9H7X7 185 aa18.81■□□□□ 0.6
RAB40C-209ENST00000565511 AMMECR1Q9Y4X0 333 aaPredicted RBP18.81■□□□□ 0.6
RAB40C-209ENST00000565511 TRAV8-7A0A075B6U6 113 aa18.8■□□□□ 0.6
RAB40C-209ENST00000565511 TRBV5-5A0A0J9YX44 114 aa18.8■□□□□ 0.6
RAB40C-209ENST00000565511 C15orf65H3BRN8 121 aa18.8■□□□□ 0.6
RAB40C-209ENST00000565511 OR7C1O76099 320 aaPredicted RBP18.8■□□□□ 0.6
RAB40C-209ENST00000565511 SERPINA2P20848 420 aa18.8■□□□□ 0.6
RAB40C-209ENST00000565511 DCKP27707 260 aa18.8■□□□□ 0.6
RAB40C-209ENST00000565511 LOXL3P58215 753 aa18.8■□□□□ 0.6
RAB40C-209ENST00000565511 HNF4GQ14541 408 aa18.8■□□□□ 0.6
RAB40C-209ENST00000565511 THNSL2Q86YJ6 484 aa18.8■□□□□ 0.6
RAB40C-209ENST00000565511 OSR2Q8N2R0 312 aa18.8■□□□□ 0.6
RAB40C-209ENST00000565511 ZNF485Q8NCK3 441 aa18.8■□□□□ 0.6
RAB40C-209ENST00000565511 OR4X2Q8NGF9 303 aa18.8■□□□□ 0.6
RAB40C-209ENST00000565511 OR52N1Q8NH53 320 aa18.8■□□□□ 0.6
RAB40C-209ENST00000565511 HAVCR2Q8TDQ0 301 aa18.8■□□□□ 0.6
RAB40C-209ENST00000565511 SMIM19Q96E16 107 aa18.8■□□□□ 0.6
RAB40C-209ENST00000565511 CPNE2Q96FN4 548 aaPredicted RBP18.8■□□□□ 0.6
RAB40C-209ENST00000565511 TMEM138Q9NPI0 162 aa18.8■□□□□ 0.6
RAB40C-209ENST00000565511 ZNF281Q9Y2X9 895 aa18.8■□□□□ 0.6
RAB40C-209ENST00000565511 CD2P06729 351 aa18.79■□□□□ 0.6
RAB40C-209ENST00000565511 FAM106CPP0CH98 169 aa18.79■□□□□ 0.6
RAB40C-209ENST00000565511 BDKRB2P30411 391 aa18.79■□□□□ 0.6
RAB40C-209ENST00000565511 ZNF93P35789 620 aaPredicted RBP18.79■□□□□ 0.6
RAB40C-209ENST00000565511 REG1BP48304 166 aa18.79■□□□□ 0.6
RAB40C-209ENST00000565511 KCNJ3P48549 501 aa18.79■□□□□ 0.6
RAB40C-209ENST00000565511 KRTAP10-11P60412 298 aa18.79■□□□□ 0.6
RAB40C-209ENST00000565511 MADCAM1Q13477 382 aa18.79■□□□□ 0.6
RAB40C-209ENST00000565511 ZNF555Q8NEP9 628 aa18.79■□□□□ 0.6
RAB40C-209ENST00000565511 PGLYRP3Q96LB9 341 aa18.79■□□□□ 0.6
RAB40C-209ENST00000565511 METTL9Q9H1A3 318 aa18.79■□□□□ 0.6
RAB40C-209ENST00000565511 LINC00527Q9UJ94 153 aa18.79■□□□□ 0.6
RAB40C-209ENST00000565511 DIMT1Q9UNQ2 313 aaKnown RBP18.79■□□□□ 0.6
RAB40C-209ENST00000565511 DNAH9Q9NYC9 4486 aa18.79■□□□□ 0.6
RAB40C-209ENST00000565511 IGHV3-72A0A0B4J1Y9 119 aa18.78■□□□□ 0.6
RAB40C-209ENST00000565511 M0QZK8 103 aa18.78■□□□□ 0.6
RAB40C-209ENST00000565511 IGKV1D-33P01593 117 aa18.78■□□□□ 0.6
RAB40C-209ENST00000565511 IGKV1-33P01594 117 aa18.78■□□□□ 0.6
RAB40C-209ENST00000565511 PF4P02776 101 aa18.78■□□□□ 0.6
RAB40C-209ENST00000565511 TMEM11P17152 192 aa18.78■□□□□ 0.6
RAB40C-209ENST00000565511 HES1Q14469 280 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms