RNA–Protein interactions for RNA: ENST00000565324.5

SMG1-211, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 12,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-211ENST00000565324 TSPAN32Q96QS1 320 aa4.52□□□□□ -1.69
SMG1-211ENST00000565324 DHCR7Q9UBM7 475 aaKnown RBP4.52□□□□□ -1.69
SMG1-211ENST00000565324 BCORQ6W2J9 1755 aa4.52□□□□□ -1.69
SMG1-211ENST00000565324 TMEM262E9PQX1 116 aa4.52□□□□□ -1.69
SMG1-211ENST00000565324 GNG7O60262 68 aa4.52□□□□□ -1.69
SMG1-211ENST00000565324 PSG5Q15238 335 aa4.52□□□□□ -1.69
SMG1-211ENST00000565324 ETFBKMTQ8IXQ9 262 aa4.52□□□□□ -1.69
SMG1-211ENST00000565324 OR2Z1Q8NG97 314 aa4.52□□□□□ -1.69
SMG1-211ENST00000565324 ABHD1Q96SE0 405 aa4.52□□□□□ -1.69
SMG1-211ENST00000565324 KCNK7Q9Y2U2 307 aa4.52□□□□□ -1.69
SMG1-211ENST00000565324 A0A096LPE4 126 aa4.52□□□□□ -1.69
SMG1-211ENST00000565324 A0A1W2PPZ6 126 aa4.52□□□□□ -1.69
SMG1-211ENST00000565324 C19orf67A6NJJ6 358 aa4.52□□□□□ -1.69
SMG1-211ENST00000565324 ZNF750Q32MQ0 723 aa4.52□□□□□ -1.69
SMG1-211ENST00000565324 TMEM211Q6ICI0 200 aa4.52□□□□□ -1.69
SMG1-211ENST00000565324 FADS6Q8N9I5 356 aa4.52□□□□□ -1.69
SMG1-211ENST00000565324 GALNT14Q96FL9 552 aa4.52□□□□□ -1.69
SMG1-211ENST00000565324 FER1L5A0AVI2 2057 aa4.52□□□□□ -1.69
SMG1-211ENST00000565324 PATJQ8NI35 1801 aa4.52□□□□□ -1.69
SMG1-211ENST00000565324 CXorf51AA0A1B0GTR3 108 aa4.52□□□□□ -1.69
SMG1-211ENST00000565324 UBE2L6O14933 153 aa4.52□□□□□ -1.69
SMG1-211ENST00000565324 SELENOTP62341 195 aa4.52□□□□□ -1.69
SMG1-211ENST00000565324 SGMS2Q8NHU3 365 aa4.52□□□□□ -1.69
SMG1-211ENST00000565324 WDR13Q9H1Z4 485 aa4.52□□□□□ -1.69
SMG1-211ENST00000565324 AKAP6Q13023 2319 aa4.52□□□□□ -1.69
SMG1-211ENST00000565324 NTHL1P78549 312 aa4.51□□□□□ -1.69
SMG1-211ENST00000565324 C1QTNF12Q5T7M4 302 aa4.51□□□□□ -1.69
SMG1-211ENST00000565324 FAM53AQ6NSI3 398 aaPredicted RBP4.51□□□□□ -1.69
SMG1-211ENST00000565324 TCF23Q7RTU1 214 aa4.51□□□□□ -1.69
SMG1-211ENST00000565324 C12orf76Q8N812 135 aaPredicted RBP4.51□□□□□ -1.69
SMG1-211ENST00000565324 NPVFQ9HCQ7 196 aa4.51□□□□□ -1.69
SMG1-211ENST00000565324 SIGLEC7Q9Y286 467 aa4.51□□□□□ -1.69
SMG1-211ENST00000565324 C17orf51A8MQB3 221 aa4.51□□□□□ -1.69
SMG1-211ENST00000565324 CHST1O43916 411 aa4.51□□□□□ -1.69
SMG1-211ENST00000565324 FGF8P55075 233 aaPredicted RBP4.51□□□□□ -1.69
SMG1-211ENST00000565324 PCBP3P57721 371 aaKnown RBP4.51□□□□□ -1.69
SMG1-211ENST00000565324 MEF2BQ02080 365 aaPredicted RBP4.51□□□□□ -1.69
SMG1-211ENST00000565324 UBALD2Q8IYN6 164 aa4.51□□□□□ -1.69
SMG1-211ENST00000565324 FBXL6Q8N531 539 aa4.51□□□□□ -1.69
SMG1-211ENST00000565324 MRPL43Q8N983 215 aaKnown RBP4.51□□□□□ -1.69
SMG1-211ENST00000565324 LSM10Q969L4 123 aaKnown RBP4.51□□□□□ -1.69
SMG1-211ENST00000565324 CXXC4Q9H2H0 198 aa4.51□□□□□ -1.69
SMG1-211ENST00000565324 MAP1LC3AQ9H492 121 aa4.51□□□□□ -1.69
SMG1-211ENST00000565324 PI4KAP42356 2102 aa4.51□□□□□ -1.69
SMG1-211ENST00000565324 NRG2O14511 850 aaPredicted RBP4.51□□□□□ -1.69
SMG1-211ENST00000565324 FGF17O60258 216 aa4.51□□□□□ -1.69
SMG1-211ENST00000565324 HINT1P49773 126 aaPredicted RBP4.51□□□□□ -1.69
SMG1-211ENST00000565324 TREM2Q9NZC2 230 aa4.51□□□□□ -1.69
SMG1-211ENST00000565324 RCC2Q9P258 522 aaKnown RBP4.51□□□□□ -1.69
SMG1-211ENST00000565324 TMEFF2Q9UIK5 374 aaPredicted RBP4.51□□□□□ -1.69
SMG1-211ENST00000565324 ERRFI1Q9UJM3 462 aaPredicted RBP4.51□□□□□ -1.69
SMG1-211ENST00000565324 H7C2G1 150 aa4.51□□□□□ -1.69
SMG1-211ENST00000565324 LSM6P62312 80 aaKnown RBP4.51□□□□□ -1.69
SMG1-211ENST00000565324 ZXDAP98168 799 aa4.51□□□□□ -1.69
SMG1-211ENST00000565324 ZNF880Q6PDB4 577 aa4.51□□□□□ -1.69
SMG1-211ENST00000565324 TCF24Q7RTU0 167 aa4.51□□□□□ -1.69
SMG1-211ENST00000565324 BATF2Q8N1L9 274 aa4.51□□□□□ -1.69
SMG1-211ENST00000565324 LRRC75AQ8NAA5 344 aa4.51□□□□□ -1.69
SMG1-211ENST00000565324 ZNF519Q8TB69 540 aa4.51□□□□□ -1.69
SMG1-211ENST00000565324 RARRES2Q99969 163 aa4.51□□□□□ -1.69
SMG1-211ENST00000565324 AKIRIN1Q9H9L7 192 aaPredicted RBP4.51□□□□□ -1.69
SMG1-211ENST00000565324 HMX2A2RU54 273 aa4.51□□□□□ -1.69
SMG1-211ENST00000565324 SIT1Q9Y3P8 196 aa4.51□□□□□ -1.69
SMG1-211ENST00000565324 GJB3O75712 270 aa4.51□□□□□ -1.69
SMG1-211ENST00000565324 ZDHHC8Q9ULC8 765 aa4.51□□□□□ -1.69
SMG1-211ENST00000565324 MYOFQ9NZM1 2061 aa4.51□□□□□ -1.69
SMG1-211ENST00000565324 A0A1W2PQM1 296 aa4.51□□□□□ -1.69
SMG1-211ENST00000565324 EWSR1Q01844 656 aaKnown RBP eCLIP4.51□□□□□ -1.69
SMG1-211ENST00000565324 EIF3IQ13347 325 aaKnown RBP4.51□□□□□ -1.69
SMG1-211ENST00000565324 KIRREL2Q6UWL6 708 aa4.51□□□□□ -1.69
SMG1-211ENST00000565324 ZG16BQ96DA0 208 aa4.51□□□□□ -1.69
SMG1-211ENST00000565324 MMP25Q9NPA2 562 aa4.51□□□□□ -1.69
SMG1-211ENST00000565324 A0A0B4J293 547 aa4.51□□□□□ -1.69
SMG1-211ENST00000565324 TRGC1P0CF51 173 aa4.51□□□□□ -1.69
SMG1-211ENST00000565324 CKS2P33552 79 aa4.51□□□□□ -1.69
SMG1-211ENST00000565324 ARF6P62330 175 aa4.51□□□□□ -1.69
SMG1-211ENST00000565324 MYBPHQ13203 477 aa4.51□□□□□ -1.69
SMG1-211ENST00000565324 ZNF506Q5JVG8 444 aa4.51□□□□□ -1.69
SMG1-211ENST00000565324 SAMD13Q5VXD3 122 aa4.51□□□□□ -1.69
SMG1-211ENST00000565324 LRP10Q7Z4F1 713 aa4.51□□□□□ -1.69
SMG1-211ENST00000565324 NUDT10Q8NFP7 164 aa4.51□□□□□ -1.69
SMG1-211ENST00000565324 NUBPLQ8TB37 319 aa4.51□□□□□ -1.69
SMG1-211ENST00000565324 ZNF665Q9H7R5 613 aa4.51□□□□□ -1.69
SMG1-211ENST00000565324 NTMQ9P121 344 aa4.51□□□□□ -1.69
SMG1-211ENST00000565324 ABCA3Q99758 1704 aa4.51□□□□□ -1.69
SMG1-211ENST00000565324 TRAV38-1A0A0B4J264 116 aa4.51□□□□□ -1.69
SMG1-211ENST00000565324 DHHO43323 396 aa4.51□□□□□ -1.69
SMG1-211ENST00000565324 FCMRO60667 390 aa4.51□□□□□ -1.69
SMG1-211ENST00000565324 IGHV3-9P01782 118 aa4.51□□□□□ -1.69
SMG1-211ENST00000565324 TMEM179BQ7Z7N9 219 aa4.51□□□□□ -1.69
SMG1-211ENST00000565324 LINC00615Q96LM1 132 aaPredicted RBP4.51□□□□□ -1.69
SMG1-211ENST00000565324 C4orf45Q96LM5 186 aa4.51□□□□□ -1.69
SMG1-211ENST00000565324 CLEC5AQ9NY25 188 aa4.51□□□□□ -1.69
SMG1-211ENST00000565324 DOCK6Q96HP0 2047 aa4.51□□□□□ -1.69
SMG1-211ENST00000565324 DNAJC25-GNG10A0A024R161 153 aa4.51□□□□□ -1.69
SMG1-211ENST00000565324 CD1BP29016 333 aa4.51□□□□□ -1.69
SMG1-211ENST00000565324 RELQ04864 619 aaPredicted RBP4.51□□□□□ -1.69
SMG1-211ENST00000565324 LRRC75BQ2VPJ9 315 aa4.51□□□□□ -1.69
SMG1-211ENST00000565324 MRPL54Q6P161 138 aaKnown RBP4.51□□□□□ -1.69
SMG1-211ENST00000565324 STPG3Q8N7X2 389 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms