RNA–Protein interactions for RNA: ENST00000564734.5

HERC2-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 3,121 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-207ENST00000564734 APH1AQ96BI3 265 aa13.03□□□□□ -0.32
HERC2-207ENST00000564734 ABHD14BQ96IU4 210 aa13.03□□□□□ -0.32
HERC2-207ENST00000564734 PLA2G3Q9NZ20 509 aa13.03□□□□□ -0.32
HERC2-207ENST00000564734 TRBV6-6A0A0A6YYG2 114 aa13.03□□□□□ -0.32
HERC2-207ENST00000564734 DUXBA0A1W2PPF3 345 aa13.03□□□□□ -0.32
HERC2-207ENST00000564734 TRAPPC2LH3BP13 241 aa13.03□□□□□ -0.32
HERC2-207ENST00000564734 CDX4O14627 284 aaPredicted RBP13.03□□□□□ -0.32
HERC2-207ENST00000564734 FOLR2P14207 255 aa13.03□□□□□ -0.32
HERC2-207ENST00000564734 NKX2-1P43699 371 aaPredicted RBP13.03□□□□□ -0.32
HERC2-207ENST00000564734 POLR2GP62487 172 aaKnown RBP eCLIP13.03□□□□□ -0.32
HERC2-207ENST00000564734 PLA2G2CQ5R387 149 aa13.03□□□□□ -0.32
HERC2-207ENST00000564734 AVPI1Q5T686 147 aa13.03□□□□□ -0.32
HERC2-207ENST00000564734 PCSK4Q6UW60 755 aa13.03□□□□□ -0.32
HERC2-207ENST00000564734 NUFIP2Q7Z417 695 aaKnown RBP13.03□□□□□ -0.32
HERC2-207ENST00000564734 ZNF695Q8IW36 515 aa13.03□□□□□ -0.32
HERC2-207ENST00000564734 MRPL30Q8TCC3 161 aaKnown RBP13.03□□□□□ -0.32
HERC2-207ENST00000564734 CD300LBA8K4G0 201 aa13.02□□□□□ -0.32
HERC2-207ENST00000564734 HOXA1P49639 335 aaPredicted RBP13.02□□□□□ -0.32
HERC2-207ENST00000564734 ASCL1P50553 236 aa13.02□□□□□ -0.32
HERC2-207ENST00000564734 PPT1P50897 306 aa13.02□□□□□ -0.32
HERC2-207ENST00000564734 ZNF616Q08AN1 781 aa13.02□□□□□ -0.32
HERC2-207ENST00000564734 DCAF10Q5QP82 559 aa13.02□□□□□ -0.32
HERC2-207ENST00000564734 HSD17B11Q8NBQ5 300 aa13.02□□□□□ -0.32
HERC2-207ENST00000564734 CCL28Q9NRJ3 127 aa13.02□□□□□ -0.32
HERC2-207ENST00000564734 SMCO4Q9NRQ5 59 aa13.02□□□□□ -0.32
HERC2-207ENST00000564734 KIR2DS1A0A191URI9 304 aa13.02□□□□□ -0.33
HERC2-207ENST00000564734 LILRA1O75019 489 aa13.02□□□□□ -0.33
HERC2-207ENST00000564734 PITX3O75364 302 aa13.02□□□□□ -0.33
HERC2-207ENST00000564734 CTXN2P0C2S0 81 aa13.02□□□□□ -0.33
HERC2-207ENST00000564734 KIR2DS4P43632 304 aa13.02□□□□□ -0.33
HERC2-207ENST00000564734 KIR2DS1Q14954 304 aa13.02□□□□□ -0.33
HERC2-207ENST00000564734 CXorf66Q5JRM2 361 aaPredicted RBP13.02□□□□□ -0.33
HERC2-207ENST00000564734 SPIN3Q5JUX0 258 aa13.02□□□□□ -0.33
HERC2-207ENST00000564734 ZNF880Q6PDB4 577 aa13.02□□□□□ -0.33
HERC2-207ENST00000564734 C20orf204Q6ZNR8 217 aa13.02□□□□□ -0.33
HERC2-207ENST00000564734 LINC00596Q86U02 117 aa13.02□□□□□ -0.33
HERC2-207ENST00000564734 ZNF565Q8N9K5 539 aa13.02□□□□□ -0.33
HERC2-207ENST00000564734 GPHA2Q96T91 129 aa13.02□□□□□ -0.33
HERC2-207ENST00000564734 OPA3Q9H6K4 179 aa13.02□□□□□ -0.33
HERC2-207ENST00000564734 A0A1B0GW64 132 aa13.02□□□□□ -0.33
HERC2-207ENST00000564734 C21orf140B9A014 251 aa13.02□□□□□ -0.33
HERC2-207ENST00000564734 PROB1E7EW31 1015 aa13.02□□□□□ -0.33
HERC2-207ENST00000564734 ADAM20O43506 726 aa13.02□□□□□ -0.33
HERC2-207ENST00000564734 WNT5AP41221 380 aa13.02□□□□□ -0.33
HERC2-207ENST00000564734 ID3Q02535 119 aa13.02□□□□□ -0.33
HERC2-207ENST00000564734 ASCL5Q7RTU5 278 aa13.02□□□□□ -0.33
HERC2-207ENST00000564734 SUMF2Q8NBJ7 301 aa13.02□□□□□ -0.33
HERC2-207ENST00000564734 DEFB124Q8NES8 71 aa13.02□□□□□ -0.33
HERC2-207ENST00000564734 SPIN2AQ99865 258 aa13.02□□□□□ -0.33
HERC2-207ENST00000564734 SPIN2BQ9BPZ2 258 aa13.02□□□□□ -0.33
HERC2-207ENST00000564734 PLEKHF2Q9H8W4 249 aa13.02□□□□□ -0.33
HERC2-207ENST00000564734 LYRM2Q9NU23 88 aaPredicted RBP13.02□□□□□ -0.33
HERC2-207ENST00000564734 C15orf54Q8N8G6 183 aa13.01□□□□□ -0.33
HERC2-207ENST00000564734 ESRP2Q9H6T0 727 aaKnown RBP13.01□□□□□ -0.33
HERC2-207ENST00000564734 HSPB6O14558 160 aa13.01□□□□□ -0.33
HERC2-207ENST00000564734 PRKACAP17612 351 aa13.01□□□□□ -0.33
HERC2-207ENST00000564734 NUBP1P53384 320 aa13.01□□□□□ -0.33
HERC2-207ENST00000564734 SP5Q6BEB4 398 aaPredicted RBP13.01□□□□□ -0.33
HERC2-207ENST00000564734 TMEM252Q8N6L7 170 aa13.01□□□□□ -0.33
HERC2-207ENST00000564734 TMEM171Q8WVE6 324 aa13.01□□□□□ -0.33
HERC2-207ENST00000564734 IL22RA2Q969J5 263 aa13.01□□□□□ -0.33
HERC2-207ENST00000564734 RIMS4Q9H426 269 aaPredicted RBP13.01□□□□□ -0.33
HERC2-207ENST00000564734 PLK3Q9H4B4 646 aa13.01□□□□□ -0.33
HERC2-207ENST00000564734 TRAV24A0A0B4J272 114 aa13□□□□□ -0.33
HERC2-207ENST00000564734 HSD17B6O14756 317 aa13□□□□□ -0.33
HERC2-207ENST00000564734 PGLYRP1O75594 196 aaPredicted RBP13□□□□□ -0.33
HERC2-207ENST00000564734 TMEM50AO95807 157 aa13□□□□□ -0.33
HERC2-207ENST00000564734 RNPS1Q15287 305 aaKnown RBP13□□□□□ -0.33
HERC2-207ENST00000564734 ZNF324BQ6AW86 544 aaPredicted RBP13□□□□□ -0.33
HERC2-207ENST00000564734 TMEM182Q6ZP80 229 aaPredicted RBP13□□□□□ -0.33
HERC2-207ENST00000564734 OR5D13Q8NGL4 314 aa13□□□□□ -0.33
HERC2-207ENST00000564734 ZNF488Q96MN9 340 aa13□□□□□ -0.33
HERC2-207ENST00000564734 CLCC1Q96S66 551 aa13□□□□□ -0.33
HERC2-207ENST00000564734 BIN3Q9NQY0 253 aa13□□□□□ -0.33
HERC2-207ENST00000564734 ABI3Q9P2A4 366 aa13□□□□□ -0.33
HERC2-207ENST00000564734 RFNGQ9Y644 331 aa13□□□□□ -0.33
HERC2-207ENST00000564734 CEP295Q9C0D2 2601 aa13□□□□□ -0.33
HERC2-207ENST00000564734 H0Y980 276 aa13□□□□□ -0.33
HERC2-207ENST00000564734 MMP9P14780 707 aa13□□□□□ -0.33
HERC2-207ENST00000564734 VDAC1P21796 283 aa13□□□□□ -0.33
HERC2-207ENST00000564734 C3AR1Q16581 482 aa13□□□□□ -0.33
HERC2-207ENST00000564734 LINC00696Q6ZRV3 163 aa13□□□□□ -0.33
HERC2-207ENST00000564734 HIST1H2AAQ96QV6 131 aa13□□□□□ -0.33
HERC2-207ENST00000564734 GLRX2Q9NS18 164 aa13□□□□□ -0.33
HERC2-207ENST00000564734 MPC1Q9Y5U8 109 aa13□□□□□ -0.33
HERC2-207ENST00000564734 FREM2Q5SZK8 3169 aa13□□□□□ -0.33
HERC2-207ENST00000564734 PRH1P02810 166 aa12.99□□□□□ -0.33
HERC2-207ENST00000564734 ITGA3P26006 1051 aa12.99□□□□□ -0.33
HERC2-207ENST00000564734 ATP6V0CP27449 155 aa12.99□□□□□ -0.33
HERC2-207ENST00000564734 PPP1CCP36873 323 aaKnown RBP12.99□□□□□ -0.33
HERC2-207ENST00000564734 IL24Q13007 206 aa12.99□□□□□ -0.33
HERC2-207ENST00000564734 IFT22Q9H7X7 185 aa12.99□□□□□ -0.33
HERC2-207ENST00000564734 SPACA1Q9HBV2 294 aa12.99□□□□□ -0.33
HERC2-207ENST00000564734 PRSS50Q9UI38 385 aa12.99□□□□□ -0.33
HERC2-207ENST00000564734 SPAARA0A1B0GVQ0 90 aa12.99□□□□□ -0.33
HERC2-207ENST00000564734 SSSCA1O60232 199 aa12.99□□□□□ -0.33
HERC2-207ENST00000564734 IL18BPO95998 194 aa12.99□□□□□ -0.33
HERC2-207ENST00000564734 ZNF266Q14584 549 aa12.99□□□□□ -0.33
HERC2-207ENST00000564734 AWAT1Q58HT5 328 aa12.99□□□□□ -0.33
HERC2-207ENST00000564734 MDS2Q8NDY4 140 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms