RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 GPR176Q14439 515 aa9.71□□□□□ -0.86
GTF3C1-204ENST00000564664 RSBN1Q5VWQ0 802 aaPredicted RBP9.71□□□□□ -0.86
GTF3C1-204ENST00000564664 HIST2H2BDQ6DRA6 164 aa9.71□□□□□ -0.86
GTF3C1-204ENST00000564664 Q6ZPA2 131 aa9.71□□□□□ -0.86
GTF3C1-204ENST00000564664 OR8H3Q8N146 312 aa9.71□□□□□ -0.86
GTF3C1-204ENST00000564664 PQLC1Q8N2U9 271 aa9.71□□□□□ -0.86
GTF3C1-204ENST00000564664 SGCDQ92629 289 aa9.71□□□□□ -0.86
GTF3C1-204ENST00000564664 S100A13Q99584 98 aa9.71□□□□□ -0.86
GTF3C1-204ENST00000564664 PPIL3Q9H2H8 161 aaKnown RBP9.71□□□□□ -0.86
GTF3C1-204ENST00000564664 C8orf4Q9NR00 106 aa9.71□□□□□ -0.86
GTF3C1-204ENST00000564664 BABAM2Q9NXR7 383 aa9.71□□□□□ -0.86
GTF3C1-204ENST00000564664 KIF25Q9UIL4 384 aa9.71□□□□□ -0.86
GTF3C1-204ENST00000564664 MOB4Q9Y3A3 225 aa9.71□□□□□ -0.86
GTF3C1-204ENST00000564664 HSPE1-MOB4S4R3N1 261 aa9.71□□□□□ -0.86
GTF3C1-204ENST00000564664 PIN1P1O15428 100 aa9.7□□□□□ -0.86
GTF3C1-204ENST00000564664 FGF16O43320 207 aa9.7□□□□□ -0.86
GTF3C1-204ENST00000564664 GPX5O75715 221 aa9.7□□□□□ -0.86
GTF3C1-204ENST00000564664 HTR3BO95264 441 aa9.7□□□□□ -0.86
GTF3C1-204ENST00000564664 CSTBP04080 98 aaKnown RBP9.7□□□□□ -0.86
GTF3C1-204ENST00000564664 SLC6A1P30531 599 aa9.7□□□□□ -0.86
GTF3C1-204ENST00000564664 GLP1RP43220 463 aa9.7□□□□□ -0.86
GTF3C1-204ENST00000564664 GTF2A1P52655 376 aaPredicted RBP9.7□□□□□ -0.86
GTF3C1-204ENST00000564664 RBM39Q14498 530 aaKnown RBP9.7□□□□□ -0.86
GTF3C1-204ENST00000564664 MPV17LQ2QL34 196 aa9.7□□□□□ -0.86
GTF3C1-204ENST00000564664 TMEM95Q3KNT9 176 aa9.7□□□□□ -0.86
GTF3C1-204ENST00000564664 TCTEX1D4Q5JR98 221 aa9.7□□□□□ -0.86
GTF3C1-204ENST00000564664 OSR2Q8N2R0 312 aa9.7□□□□□ -0.86
GTF3C1-204ENST00000564664 C8orf31Q8N9H6 132 aa9.7□□□□□ -0.86
GTF3C1-204ENST00000564664 OR52M1Q8NGK5 317 aa9.7□□□□□ -0.86
GTF3C1-204ENST00000564664 OR13A1Q8NGR1 328 aa9.7□□□□□ -0.86
GTF3C1-204ENST00000564664 APH1BQ8WW43 257 aa9.7□□□□□ -0.86
GTF3C1-204ENST00000564664 MYDGFQ969H8 173 aa9.7□□□□□ -0.86
GTF3C1-204ENST00000564664 TOMM40LQ969M1 308 aa9.7□□□□□ -0.86
GTF3C1-204ENST00000564664 TMEM106AQ96A25 262 aa9.7□□□□□ -0.86
GTF3C1-204ENST00000564664 RCC1LQ96I51 464 aaKnown RBP9.7□□□□□ -0.86
GTF3C1-204ENST00000564664 DPCDQ9BVM2 203 aaPredicted RBP9.7□□□□□ -0.86
GTF3C1-204ENST00000564664 GPR61Q9BZJ8 451 aa9.7□□□□□ -0.86
GTF3C1-204ENST00000564664 CHCHD3Q9NX63 227 aaKnown RBP9.7□□□□□ -0.86
GTF3C1-204ENST00000564664 ING3Q9NXR8 418 aa9.7□□□□□ -0.86
GTF3C1-204ENST00000564664 SMPD3Q9NY59 655 aaPredicted RBP9.7□□□□□ -0.86
GTF3C1-204ENST00000564664 ING4Q9UNL4 249 aa9.7□□□□□ -0.86
GTF3C1-204ENST00000564664 PSG11Q9UQ72 335 aa9.7□□□□□ -0.86
GTF3C1-204ENST00000564664 ST3GAL6Q9Y274 331 aa9.7□□□□□ -0.86
GTF3C1-204ENST00000564664 ZNF281Q9Y2X9 895 aa9.7□□□□□ -0.86
GTF3C1-204ENST00000564664 EXOSC1Q9Y3B2 195 aaKnown RBP9.7□□□□□ -0.86
GTF3C1-204ENST00000564664 FAM172BPA6NC97 362 aa9.69□□□□□ -0.86
GTF3C1-204ENST00000564664 WBP4O75554 376 aaKnown RBP9.69□□□□□ -0.86
GTF3C1-204ENST00000564664 MYL12AP19105 171 aa9.69□□□□□ -0.86
GTF3C1-204ENST00000564664 BDKRB2P30411 391 aa9.69□□□□□ -0.86
GTF3C1-204ENST00000564664 ZNF93P35789 620 aaPredicted RBP9.69□□□□□ -0.86
GTF3C1-204ENST00000564664 SOX2P48431 317 aa9.69□□□□□ -0.86
GTF3C1-204ENST00000564664 SLC35A2P78381 396 aa9.69□□□□□ -0.86
GTF3C1-204ENST00000564664 Q3ZCU0 254 aa9.69□□□□□ -0.86
GTF3C1-204ENST00000564664 TTC23Q5W5X9 447 aa9.69□□□□□ -0.86
GTF3C1-204ENST00000564664 CDH26Q8IXH8 852 aa9.69□□□□□ -0.86
GTF3C1-204ENST00000564664 COMMD1Q8N668 190 aa9.69□□□□□ -0.86
GTF3C1-204ENST00000564664 SUMF2Q8NBJ7 301 aa9.69□□□□□ -0.86
GTF3C1-204ENST00000564664 OR51A2Q8NGJ7 313 aa9.69□□□□□ -0.86
GTF3C1-204ENST00000564664 OR10X1Q8NGY0 326 aa9.69□□□□□ -0.86
GTF3C1-204ENST00000564664 OR52N1Q8NH53 320 aa9.69□□□□□ -0.86
GTF3C1-204ENST00000564664 MRAPQ8TCY5 172 aa9.69□□□□□ -0.86
GTF3C1-204ENST00000564664 CHPT1Q8WUD6 406 aa9.69□□□□□ -0.86
GTF3C1-204ENST00000564664 PHF21AQ96BD5 680 aa9.69□□□□□ -0.86
GTF3C1-204ENST00000564664 SMIM19Q96E16 107 aa9.69□□□□□ -0.86
GTF3C1-204ENST00000564664 MRPS24Q96EL2 167 aaKnown RBP9.69□□□□□ -0.86
GTF3C1-204ENST00000564664 FAM192AQ9GZU8 254 aa9.69□□□□□ -0.86
GTF3C1-204ENST00000564664 SPACA1Q9HBV2 294 aa9.69□□□□□ -0.86
GTF3C1-204ENST00000564664 RAB9BQ9NP90 201 aa9.69□□□□□ -0.86
GTF3C1-204ENST00000564664 ZFP57Q9NU63 452 aa9.69□□□□□ -0.86
GTF3C1-204ENST00000564664 TAS2R4Q9NYW5 299 aa9.69□□□□□ -0.86
GTF3C1-204ENST00000564664 CKLFQ9UBR5 152 aa9.69□□□□□ -0.86
GTF3C1-204ENST00000564664 DIMT1Q9UNQ2 313 aaKnown RBP9.69□□□□□ -0.86
GTF3C1-204ENST00000564664 A0A1W2PRX2 142 aa9.68□□□□□ -0.86
GTF3C1-204ENST00000564664 TMEM30CPA0ZSE6 113 aa9.68□□□□□ -0.86
GTF3C1-204ENST00000564664 PSMB11A5LHX3 300 aa9.68□□□□□ -0.86
GTF3C1-204ENST00000564664 CCRL2O00421 344 aa9.68□□□□□ -0.86
GTF3C1-204ENST00000564664 HSPB6O14558 160 aa9.68□□□□□ -0.86
GTF3C1-204ENST00000564664 ORC5O43913 435 aa9.68□□□□□ -0.86
GTF3C1-204ENST00000564664 OR7C1O76099 320 aaPredicted RBP9.68□□□□□ -0.86
GTF3C1-204ENST00000564664 PF4P02776 101 aa9.68□□□□□ -0.86
GTF3C1-204ENST00000564664 GAPDHP04406 335 aaKnown RBP9.68□□□□□ -0.86
GTF3C1-204ENST00000564664 SNRNP70P08621 437 aaKnown RBP9.68□□□□□ -0.86
GTF3C1-204ENST00000564664 GTF2F2P13984 249 aa9.68□□□□□ -0.86
GTF3C1-204ENST00000564664 ETV1P50549 477 aa9.68□□□□□ -0.86
GTF3C1-204ENST00000564664 RBM11P57052 281 aaKnown RBP9.68□□□□□ -0.86
GTF3C1-204ENST00000564664 ZNF816Q0VGE8 651 aaPredicted RBP9.68□□□□□ -0.86
GTF3C1-204ENST00000564664 EBI3Q14213 229 aa9.68□□□□□ -0.86
GTF3C1-204ENST00000564664 PIGYQ3MUY2 71 aa9.68□□□□□ -0.86
GTF3C1-204ENST00000564664 YIF1BQ5BJH7 314 aa9.68□□□□□ -0.86
GTF3C1-204ENST00000564664 C9orf152Q5JTZ5 239 aa9.68□□□□□ -0.86
GTF3C1-204ENST00000564664 DDI2Q5TDH0 399 aa9.68□□□□□ -0.86
GTF3C1-204ENST00000564664 FOXB2Q5VYV0 432 aa9.68□□□□□ -0.86
GTF3C1-204ENST00000564664 LINC00311Q8N616 119 aa9.68□□□□□ -0.86
GTF3C1-204ENST00000564664 DRAM1Q8N682 238 aa9.68□□□□□ -0.86
GTF3C1-204ENST00000564664 SETD9Q8NE22 299 aa9.68□□□□□ -0.86
GTF3C1-204ENST00000564664 OR51D1Q8NGF3 324 aa9.68□□□□□ -0.86
GTF3C1-204ENST00000564664 MRGPRDQ8TDS7 321 aa9.68□□□□□ -0.86
GTF3C1-204ENST00000564664 RGP1Q92546 391 aaPredicted RBP9.68□□□□□ -0.86
GTF3C1-204ENST00000564664 TRBV5-5A0A0J9YX44 114 aa9.67□□□□□ -0.86
GTF3C1-204ENST00000564664 A0A1W2PPI3 338 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms