RNA–Protein interactions for RNA: ENST00000564593.1

LINC00560-201, long intergenic non-protein coding RNA 560, humanhuman

TSL 1 (best) BASIC

Gene LINC00560, Length 1,599 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00560-201ENST00000564593 OR2AG1Q9H205 316 aa2.72□□□□□ -1.97
LINC00560-201ENST00000564593 MFSD1Q9H3U5 465 aa2.72□□□□□ -1.97
LINC00560-201ENST00000564593 POMKQ9H5K3 350 aa2.72□□□□□ -1.97
LINC00560-201ENST00000564593 ADA2Q9NZK5 511 aa2.72□□□□□ -1.97
LINC00560-201ENST00000564593 TMEM216Q9P0N5 145 aa2.72□□□□□ -1.97
LINC00560-201ENST00000564593 FBXO5Q9UKT4 447 aa2.72□□□□□ -1.97
LINC00560-201ENST00000564593 NDUFAF1Q9Y375 327 aa2.72□□□□□ -1.97
LINC00560-201ENST00000564593 AP4S1Q9Y587 144 aa2.72□□□□□ -1.97
LINC00560-201ENST00000564593 CACNA1AO00555 2505 aa2.72□□□□□ -1.97
LINC00560-201ENST00000564593 TANC1Q9C0D5 1861 aa2.71□□□□□ -1.97
LINC00560-201ENST00000564593 CCDC160A6NGH7 325 aa2.71□□□□□ -1.98
LINC00560-201ENST00000564593 ARL5CA6NH57 179 aa2.71□□□□□ -1.98
LINC00560-201ENST00000564593 SLC22A20A6NK97 555 aa2.71□□□□□ -1.98
LINC00560-201ENST00000564593 COLCA2A8K830 154 aa2.71□□□□□ -1.98
LINC00560-201ENST00000564593 F5H5T6 163 aa2.71□□□□□ -1.98
LINC00560-201ENST00000564593 PSMD11O00231 422 aa2.71□□□□□ -1.98
LINC00560-201ENST00000564593 MRASO14807 208 aa2.71□□□□□ -1.98
LINC00560-201ENST00000564593 SLC19A2O60779 497 aa2.71□□□□□ -1.98
LINC00560-201ENST00000564593 VAPBO95292 243 aa2.71□□□□□ -1.98
LINC00560-201ENST00000564593 IGLV3-25P01717 112 aa2.71□□□□□ -1.98
LINC00560-201ENST00000564593 HLA-DQB1P01920 261 aa2.71□□□□□ -1.98
LINC00560-201ENST00000564593 CATP04040 527 aaKnown RBP2.71□□□□□ -1.98
LINC00560-201ENST00000564593 CD74P04233 296 aa2.71□□□□□ -1.98
LINC00560-201ENST00000564593 SLC35E2BP0CK96 405 aa2.71□□□□□ -1.98
LINC00560-201ENST00000564593 GFAPP14136 432 aa2.71□□□□□ -1.98
LINC00560-201ENST00000564593 PMCHP20382 165 aa2.71□□□□□ -1.98
LINC00560-201ENST00000564593 LOXP28300 417 aaPredicted RBP2.71□□□□□ -1.98
LINC00560-201ENST00000564593 GABRR2P28476 465 aa2.71□□□□□ -1.98
LINC00560-201ENST00000564593 LCN2P80188 198 aa2.71□□□□□ -1.98
LINC00560-201ENST00000564593 PITPNAQ00169 270 aa2.71□□□□□ -1.98
LINC00560-201ENST00000564593 CDC20Q12834 499 aa2.71□□□□□ -1.98
LINC00560-201ENST00000564593 POU6F1Q14863 301 aa2.71□□□□□ -1.98
LINC00560-201ENST00000564593 TSC22D1Q15714 1073 aa2.71□□□□□ -1.98
LINC00560-201ENST00000564593 RNASE13Q5GAN3 156 aaKnown RBP2.71□□□□□ -1.98
LINC00560-201ENST00000564593 TPRG1LQ5T0D9 272 aa2.71□□□□□ -1.98
LINC00560-201ENST00000564593 MLIPQ5VWP3 458 aa2.71□□□□□ -1.98
LINC00560-201ENST00000564593 ULK3Q6PHR2 472 aa2.71□□□□□ -1.98
LINC00560-201ENST00000564593 DEFB132Q7Z7B7 95 aa2.71□□□□□ -1.98
LINC00560-201ENST00000564593 DHFR2Q86XF0 187 aa2.71□□□□□ -1.98
LINC00560-201ENST00000564593 RAB43Q86YS6 212 aa2.71□□□□□ -1.98
LINC00560-201ENST00000564593 TCAIMQ8N3R3 496 aa2.71□□□□□ -1.98
LINC00560-201ENST00000564593 LINC00469Q8N7U9 141 aa2.71□□□□□ -1.98
LINC00560-201ENST00000564593 C19orf18Q8NEA5 215 aa2.71□□□□□ -1.98
LINC00560-201ENST00000564593 TTLQ8NG68 377 aa2.71□□□□□ -1.98
LINC00560-201ENST00000564593 OR5T3Q8NGG3 340 aa2.71□□□□□ -1.98
LINC00560-201ENST00000564593 OR9A2Q8NGT5 310 aa2.71□□□□□ -1.98
LINC00560-201ENST00000564593 STAG3L4Q8TBR4 150 aa2.71□□□□□ -1.98
LINC00560-201ENST00000564593 SPPL2BQ8TCT7 592 aa2.71□□□□□ -1.98
LINC00560-201ENST00000564593 KCTD4Q8WVF5 259 aa2.71□□□□□ -1.98
LINC00560-201ENST00000564593 PYDC1Q8WXC3 89 aa2.71□□□□□ -1.98
LINC00560-201ENST00000564593 ITFG2Q969R8 447 aa2.71□□□□□ -1.98
LINC00560-201ENST00000564593 SLC25A46Q96AG3 418 aa2.71□□□□□ -1.98
LINC00560-201ENST00000564593 PPWD1Q96BP3 646 aaKnown RBP2.71□□□□□ -1.98
LINC00560-201ENST00000564593 DGCR14Q96DF8 476 aaKnown RBP2.71□□□□□ -1.98
LINC00560-201ENST00000564593 IMP4Q96G21 291 aaKnown RBP2.71□□□□□ -1.98
LINC00560-201ENST00000564593 RMND5BQ96G75 393 aaPredicted RBP2.71□□□□□ -1.98
LINC00560-201ENST00000564593 DCUN1D1Q96GG9 259 aa2.71□□□□□ -1.98
LINC00560-201ENST00000564593 RDH12Q96NR8 316 aa2.71□□□□□ -1.98
LINC00560-201ENST00000564593 CATSPER2Q96P56 530 aa2.71□□□□□ -1.98
LINC00560-201ENST00000564593 AGMATQ9BSE5 352 aa2.71□□□□□ -1.98
LINC00560-201ENST00000564593 TOLLIPQ9H0E2 274 aa2.71□□□□□ -1.98
LINC00560-201ENST00000564593 SPACA1Q9HBV2 294 aa2.71□□□□□ -1.98
LINC00560-201ENST00000564593 EXOSC4Q9NPD3 245 aaKnown RBP2.71□□□□□ -1.98
LINC00560-201ENST00000564593 TREX1Q9NSU2 369 aa2.71□□□□□ -1.98
LINC00560-201ENST00000564593 RBM22Q9NW64 420 aaKnown RBP eCLIP2.71□□□□□ -1.98
LINC00560-201ENST00000564593 TAS2R13Q9NYV9 303 aa2.71□□□□□ -1.98
LINC00560-201ENST00000564593 HES2Q9Y543 173 aa2.71□□□□□ -1.98
LINC00560-201ENST00000564593 ORC6Q9Y5N6 252 aa2.71□□□□□ -1.98
LINC00560-201ENST00000564593 KIF26AQ9ULI4 1882 aaPredicted RBP2.71□□□□□ -1.98
LINC00560-201ENST00000564593 ZFC3H1O60293 1989 aaKnown RBP2.71□□□□□ -1.98
LINC00560-201ENST00000564593 A0A087WXM4 84 aa2.7□□□□□ -1.98
LINC00560-201ENST00000564593 CXorf51AA0A1B0GTR3 108 aa2.7□□□□□ -1.98
LINC00560-201ENST00000564593 A0A1B0GUH1 482 aa2.7□□□□□ -1.98
LINC00560-201ENST00000564593 A0A1W2PPV4 95 aa2.7□□□□□ -1.98
LINC00560-201ENST00000564593 DHRS12A0PJE2 317 aa2.7□□□□□ -1.98
LINC00560-201ENST00000564593 OR5H1A6NKK0 313 aa2.7□□□□□ -1.98
LINC00560-201ENST00000564593 E5RI56 91 aa2.7□□□□□ -1.98
LINC00560-201ENST00000564593 TAAR5O14804 337 aa2.7□□□□□ -1.98
LINC00560-201ENST00000564593 AZIN1O14977 448 aa2.7□□□□□ -1.98
LINC00560-201ENST00000564593 SERPINB7O75635 380 aa2.7□□□□□ -1.98
LINC00560-201ENST00000564593 PIAS1O75925 651 aa2.7□□□□□ -1.98
LINC00560-201ENST00000564593 IGHV3-11P01762 117 aa2.7□□□□□ -1.98
LINC00560-201ENST00000564593 STAG3L2P0CL84 134 aa2.7□□□□□ -1.98
LINC00560-201ENST00000564593 IL1RNP18510 177 aa2.7□□□□□ -1.98
LINC00560-201ENST00000564593 PTNP21246 168 aa2.7□□□□□ -1.98
LINC00560-201ENST00000564593 CLDN6P56747 220 aa2.7□□□□□ -1.98
LINC00560-201ENST00000564593 PSME3P61289 254 aa2.7□□□□□ -1.98
LINC00560-201ENST00000564593 ATP6AP1LQ52LC2 224 aa2.7□□□□□ -1.98
LINC00560-201ENST00000564593 SYPL2Q5VXT5 272 aa2.7□□□□□ -1.98
LINC00560-201ENST00000564593 OR2T5Q6IEZ7 315 aa2.7□□□□□ -1.98
LINC00560-201ENST00000564593 MDP1Q86V88 176 aa2.7□□□□□ -1.98
LINC00560-201ENST00000564593 TRIML2Q8N7C3 387 aa2.7□□□□□ -1.98
LINC00560-201ENST00000564593 OR2T29Q8NH02 315 aa2.7□□□□□ -1.98
LINC00560-201ENST00000564593 ZNF420Q8TAQ5 688 aaPredicted RBP2.7□□□□□ -1.98
LINC00560-201ENST00000564593 RXFP4Q8TDU9 374 aa2.7□□□□□ -1.98
LINC00560-201ENST00000564593 NAT14Q8WUY8 206 aa2.7□□□□□ -1.98
LINC00560-201ENST00000564593 TMA16Q96EY4 203 aaKnown RBP2.7□□□□□ -1.98
LINC00560-201ENST00000564593 BIRC8Q96P09 236 aa2.7□□□□□ -1.98
LINC00560-201ENST00000564593 TRIB3Q96RU7 358 aa2.7□□□□□ -1.98
LINC00560-201ENST00000564593 TIMM29Q9BSF4 260 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms