RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-210ENST00000564587 LINC01560Q8TB33 94 aa13.1□□□□□ -0.31
COMMD4-210ENST00000564587 MITD1Q8WV92 249 aa13.1□□□□□ -0.31
COMMD4-210ENST00000564587 CAPSLQ8WWF8 208 aa13.1□□□□□ -0.31
COMMD4-210ENST00000564587 MOB3AQ96BX8 217 aa13.1□□□□□ -0.31
COMMD4-210ENST00000564587 PIK3IP1Q96FE7 263 aa13.1□□□□□ -0.31
COMMD4-210ENST00000564587 ZNF486Q96H40 463 aaPredicted RBP13.1□□□□□ -0.31
COMMD4-210ENST00000564587 CYYR1Q96J86 154 aa13.1□□□□□ -0.31
COMMD4-210ENST00000564587 HYLS1Q96M11 299 aa13.1□□□□□ -0.31
COMMD4-210ENST00000564587 DMRTB1Q96MA1 342 aa13.1□□□□□ -0.31
COMMD4-210ENST00000564587 C5orf66Q9H5L9 145 aa13.1□□□□□ -0.31
COMMD4-210ENST00000564587 WIPI2Q9Y4P8 454 aa13.1□□□□□ -0.31
COMMD4-210ENST00000564587 RFPL4AA6NLU0 287 aa13.09□□□□□ -0.31
COMMD4-210ENST00000564587 E7EQL1 145 aa13.09□□□□□ -0.31
COMMD4-210ENST00000564587 RFPL4AL1F8VTS6 287 aa13.09□□□□□ -0.31
COMMD4-210ENST00000564587 WNT9BO14905 357 aa13.09□□□□□ -0.31
COMMD4-210ENST00000564587 OR2A4O95047 310 aa13.09□□□□□ -0.31
COMMD4-210ENST00000564587 CLDN14O95500 239 aa13.09□□□□□ -0.31
COMMD4-210ENST00000564587 AKR1C4P17516 323 aa13.09□□□□□ -0.31
COMMD4-210ENST00000564587 HLA-GP17693 338 aa13.09□□□□□ -0.31
COMMD4-210ENST00000564587 CXCL3P19876 107 aa13.09□□□□□ -0.31
COMMD4-210ENST00000564587 PRDX2P32119 198 aa13.09□□□□□ -0.31
COMMD4-210ENST00000564587 GZMKP49863 264 aa13.09□□□□□ -0.31
COMMD4-210ENST00000564587 GMFBP60983 142 aa13.09□□□□□ -0.31
COMMD4-210ENST00000564587 TLE1Q04724 770 aa13.09□□□□□ -0.31
COMMD4-210ENST00000564587 PPP1R1AQ13522 171 aa13.09□□□□□ -0.31
COMMD4-210ENST00000564587 TRAT1Q6PIZ9 186 aa13.09□□□□□ -0.31
COMMD4-210ENST00000564587 DMRTC2Q8IXT2 367 aaPredicted RBP13.09□□□□□ -0.31
COMMD4-210ENST00000564587 SLC38A6Q8IZM9 456 aa13.09□□□□□ -0.31
COMMD4-210ENST00000564587 GCSAMQ8N6F7 178 aa13.09□□□□□ -0.31
COMMD4-210ENST00000564587 COQ8AQ8NI60 647 aa13.09□□□□□ -0.31
COMMD4-210ENST00000564587 OR2A7Q96R45 310 aa13.09□□□□□ -0.31
COMMD4-210ENST00000564587 RTBDNQ9BSG5 229 aaPredicted RBP13.09□□□□□ -0.31
COMMD4-210ENST00000564587 CABLES2Q9BTV7 478 aa13.09□□□□□ -0.31
COMMD4-210ENST00000564587 GCM1Q9NP62 436 aa13.09□□□□□ -0.31
COMMD4-210ENST00000564587 MBNL3Q9NUK0 354 aaKnown RBP13.09□□□□□ -0.31
COMMD4-210ENST00000564587 KCNIP1Q9NZI2 227 aa13.09□□□□□ -0.31
COMMD4-210ENST00000564587 TRAPPC2LQ9UL33 140 aa13.09□□□□□ -0.31
COMMD4-210ENST00000564587 FAM172BPA6NC97 362 aa13.08□□□□□ -0.32
COMMD4-210ENST00000564587 NPIPB11E5RHQ5 1161 aa13.08□□□□□ -0.32
COMMD4-210ENST00000564587 SLC22A5O76082 557 aa13.08□□□□□ -0.32
COMMD4-210ENST00000564587 RGS11O94810 467 aa13.08□□□□□ -0.32
COMMD4-210ENST00000564587 SFT2D2O95562 160 aa13.08□□□□□ -0.32
COMMD4-210ENST00000564587 VAMP1P23763 118 aa13.08□□□□□ -0.32
COMMD4-210ENST00000564587 C6orf183Q5T699 404 aa13.08□□□□□ -0.32
COMMD4-210ENST00000564587 C17orf107Q6ZR85 190 aa13.08□□□□□ -0.32
COMMD4-210ENST00000564587 SGPP2Q8IWX5 399 aa13.08□□□□□ -0.32
COMMD4-210ENST00000564587 FAM185AQ8N0U4 392 aa13.08□□□□□ -0.32
COMMD4-210ENST00000564587 C1orf87Q8N0U7 546 aa13.08□□□□□ -0.32
COMMD4-210ENST00000564587 CCDC71LQ8N9Z2 235 aa13.08□□□□□ -0.32
COMMD4-210ENST00000564587 ADAD2Q8NCV1 583 aaKnown RBP13.08□□□□□ -0.32
COMMD4-210ENST00000564587 PLPPR1Q8TBJ4 325 aa13.08□□□□□ -0.32
COMMD4-210ENST00000564587 FAM222BQ8WU58 562 aa13.08□□□□□ -0.32
COMMD4-210ENST00000564587 SNX22Q96L94 193 aa13.08□□□□□ -0.32
COMMD4-210ENST00000564587 NCOR1P1Q9H4R4 102 aa13.08□□□□□ -0.32
COMMD4-210ENST00000564587 PPP1R3CQ9UQK1 317 aa13.08□□□□□ -0.32
COMMD4-210ENST00000564587 KCNIP3Q9Y2W7 256 aa13.08□□□□□ -0.32
COMMD4-210ENST00000564587 UNC79Q9P2D8 2635 aa13.08□□□□□ -0.32
COMMD4-210ENST00000564587 CHD3Q12873 2000 aaKnown RBP13.07□□□□□ -0.32
COMMD4-210ENST00000564587 J3QKU1 62 aa13.07□□□□□ -0.32
COMMD4-210ENST00000564587 PPYP01298 95 aa13.07□□□□□ -0.32
COMMD4-210ENST00000564587 PSG2P11465 335 aa13.07□□□□□ -0.32
COMMD4-210ENST00000564587 MUC1P15941 1255 aaPredicted RBP13.07□□□□□ -0.32
COMMD4-210ENST00000564587 COL10A1Q03692 680 aa13.07□□□□□ -0.32
COMMD4-210ENST00000564587 TFF3Q07654 80 aa13.07□□□□□ -0.32
COMMD4-210ENST00000564587 KCNJ8Q15842 424 aa13.07□□□□□ -0.32
COMMD4-210ENST00000564587 ABCA11PQ4W5N1 156 aa13.07□□□□□ -0.32
COMMD4-210ENST00000564587 Q6ZPA2 131 aa13.07□□□□□ -0.32
COMMD4-210ENST00000564587 UXS1Q8NBZ7 420 aa13.07□□□□□ -0.32
COMMD4-210ENST00000564587 OR5D13Q8NGL4 314 aa13.07□□□□□ -0.32
COMMD4-210ENST00000564587 VRK1Q99986 396 aaPredicted RBP13.07□□□□□ -0.32
COMMD4-210ENST00000564587 DYNLRB1Q9NP97 96 aa13.07□□□□□ -0.32
COMMD4-210ENST00000564587 DLL4Q9NR61 685 aa13.07□□□□□ -0.32
COMMD4-210ENST00000564587 OPN4Q9UHM6 478 aa13.07□□□□□ -0.32
COMMD4-210ENST00000564587 PLCE1Q9P212 2302 aa13.06□□□□□ -0.32
COMMD4-210ENST00000564587 TRBV6-7A0A0A0MS04 114 aa13.06□□□□□ -0.32
COMMD4-210ENST00000564587 OOEPA6NGQ2 149 aa13.06□□□□□ -0.32
COMMD4-210ENST00000564587 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.06□□□□□ -0.32
COMMD4-210ENST00000564587 MGST3O14880 152 aa13.06□□□□□ -0.32
COMMD4-210ENST00000564587 PSPNO60542 156 aa13.06□□□□□ -0.32
COMMD4-210ENST00000564587 TUSC2O75896 110 aa13.06□□□□□ -0.32
COMMD4-210ENST00000564587 SCTP09683 121 aa13.06□□□□□ -0.32
COMMD4-210ENST00000564587 EGR1P18146 543 aa13.06□□□□□ -0.32
COMMD4-210ENST00000564587 GNLYP22749 145 aa13.06□□□□□ -0.32
COMMD4-210ENST00000564587 HMGN3Q15651 99 aa13.06□□□□□ -0.32
COMMD4-210ENST00000564587 IGSF11Q5DX21 431 aa13.06□□□□□ -0.32
COMMD4-210ENST00000564587 NLRC3Q7RTR2 1065 aa13.06□□□□□ -0.32
COMMD4-210ENST00000564587 ZNF565Q8N9K5 539 aa13.06□□□□□ -0.32
COMMD4-210ENST00000564587 OR5T2Q8NGG2 359 aa13.06□□□□□ -0.32
COMMD4-210ENST00000564587 OR10J5Q8NHC4 309 aa13.06□□□□□ -0.32
COMMD4-210ENST00000564587 TMEM230Q96A57 120 aa13.06□□□□□ -0.32
COMMD4-210ENST00000564587 KIRREL1Q96J84 757 aa13.06□□□□□ -0.32
COMMD4-210ENST00000564587 TMEM204Q9BSN7 226 aa13.06□□□□□ -0.32
COMMD4-210ENST00000564587 RSRP1Q9BUV0 290 aa13.06□□□□□ -0.32
COMMD4-210ENST00000564587 FXYD6Q9H0Q3 95 aa13.06□□□□□ -0.32
COMMD4-210ENST00000564587 RAB9BQ9NP90 201 aa13.06□□□□□ -0.32
COMMD4-210ENST00000564587 CISD1Q9NZ45 108 aaKnown RBP13.06□□□□□ -0.32
COMMD4-210ENST00000564587 PIGBOS1A0A0B4J2F0 54 aa13.05□□□□□ -0.32
COMMD4-210ENST00000564587 GOSR2O14653 212 aa13.05□□□□□ -0.32
COMMD4-210ENST00000564587 BET1O15155 118 aa13.05□□□□□ -0.32
COMMD4-210ENST00000564587 IFNA2P01563 188 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms