RNA–Protein interactions for RNA: ENST00000564519.1

HERC2-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 3

Gene HERC2, Length 323 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-206ENST00000564519 CD1AP06126 327 aa10.18□□□□□ -0.78
HERC2-206ENST00000564519 CSF1P09603 554 aa10.18□□□□□ -0.78
HERC2-206ENST00000564519 NFYBP25208 207 aa10.18□□□□□ -0.78
HERC2-206ENST00000564519 SSTR5P35346 364 aa10.18□□□□□ -0.78
HERC2-206ENST00000564519 BLCAPP62952 87 aa10.18□□□□□ -0.78
HERC2-206ENST00000564519 LTC4SQ16873 150 aa10.18□□□□□ -0.78
HERC2-206ENST00000564519 HLA-DRB5Q30154 266 aa10.18□□□□□ -0.78
HERC2-206ENST00000564519 NHLRC3Q5JS37 347 aa10.18□□□□□ -0.78
HERC2-206ENST00000564519 C6orf141Q5SZD1 244 aa10.18□□□□□ -0.78
HERC2-206ENST00000564519 GLIPR1L1Q6UWM5 242 aa10.18□□□□□ -0.78
HERC2-206ENST00000564519 LYPD6Q86Y78 171 aa10.18□□□□□ -0.78
HERC2-206ENST00000564519 JAGN1Q8N5M9 183 aa10.18□□□□□ -0.78
HERC2-206ENST00000564519 KLHDC1Q8N7A1 406 aa10.18□□□□□ -0.78
HERC2-206ENST00000564519 OR4D6Q8NGJ1 314 aa10.18□□□□□ -0.78
HERC2-206ENST00000564519 OR2T6Q8NHC8 308 aa10.18□□□□□ -0.78
HERC2-206ENST00000564519 RFESDQ8TAC1 157 aa10.18□□□□□ -0.78
HERC2-206ENST00000564519 ZNF596Q8TC21 504 aa10.18□□□□□ -0.78
HERC2-206ENST00000564519 LEAP2Q969E1 77 aa10.18□□□□□ -0.78
HERC2-206ENST00000564519 KIRREL1Q96J84 757 aa10.18□□□□□ -0.78
HERC2-206ENST00000564519 OR5M11Q96RB7 305 aa10.18□□□□□ -0.78
HERC2-206ENST00000564519 BARHL1Q9BZE3 327 aa10.18□□□□□ -0.78
HERC2-206ENST00000564519 IFT22Q9H7X7 185 aa10.18□□□□□ -0.78
HERC2-206ENST00000564519 CKLFQ9UBR5 152 aa10.18□□□□□ -0.78
HERC2-206ENST00000564519 ERICH4A6NGS2 130 aa10.17□□□□□ -0.78
HERC2-206ENST00000564519 LEUTXA8MZ59 168 aa10.17□□□□□ -0.78
HERC2-206ENST00000564519 NPIPB11E5RHQ5 1161 aa10.17□□□□□ -0.78
HERC2-206ENST00000564519 LY6LH3BQJ8 138 aa10.17□□□□□ -0.78
HERC2-206ENST00000564519 BUB1B-PAK6H3BSN5 160 aa10.17□□□□□ -0.78
HERC2-206ENST00000564519 IL1AP01583 271 aa10.17□□□□□ -0.78
HERC2-206ENST00000564519 VSIG10L2P0DP72 767 aa10.17□□□□□ -0.78
HERC2-206ENST00000564519 GP2P55259 537 aaKnown RBP10.17□□□□□ -0.78
HERC2-206ENST00000564519 PAX5Q02548 391 aa10.17□□□□□ -0.78
HERC2-206ENST00000564519 RBM39Q14498 530 aaKnown RBP10.17□□□□□ -0.78
HERC2-206ENST00000564519 HERPUD1Q15011 391 aa10.17□□□□□ -0.78
HERC2-206ENST00000564519 TPTE2P1Q5T6R2 138 aa10.17□□□□□ -0.78
HERC2-206ENST00000564519 RNLSQ5VYX0 342 aa10.17□□□□□ -0.78
HERC2-206ENST00000564519 Q8N2B8 174 aa10.17□□□□□ -0.78
HERC2-206ENST00000564519 ZNF565Q8N9K5 539 aa10.17□□□□□ -0.78
HERC2-206ENST00000564519 S100A13Q99584 98 aa10.17□□□□□ -0.78
HERC2-206ENST00000564519 NCOR1P1Q9H4R4 102 aa10.17□□□□□ -0.78
HERC2-206ENST00000564519 LINC00574Q9H8X3 128 aa10.17□□□□□ -0.78
HERC2-206ENST00000564519 SERTAD4Q9NUC0 356 aa10.17□□□□□ -0.78
HERC2-206ENST00000564519 IDI2-AS1Q9NZ38 188 aa10.17□□□□□ -0.78
HERC2-206ENST00000564519 ERGIC3Q9Y282 383 aa10.17□□□□□ -0.78
HERC2-206ENST00000564519 MRPS28Q9Y2Q9 187 aaKnown RBP10.17□□□□□ -0.78
HERC2-206ENST00000564519 LSM2Q9Y333 95 aaKnown RBP10.17□□□□□ -0.78
HERC2-206ENST00000564519 DSCAML1Q8TD84 2053 aa10.16□□□□□ -0.78
HERC2-206ENST00000564519 TOR1AO14656 332 aa10.16□□□□□ -0.78
HERC2-206ENST00000564519 ZNF780AO75290 641 aaPredicted RBP10.16□□□□□ -0.78
HERC2-206ENST00000564519 GTF2F2P13984 249 aa10.16□□□□□ -0.78
HERC2-206ENST00000564519 VHLP40337 213 aa10.16□□□□□ -0.78
HERC2-206ENST00000564519 KCNJ3P48549 501 aa10.16□□□□□ -0.78
HERC2-206ENST00000564519 DIAPH2-AS1Q14236 149 aa10.16□□□□□ -0.78
HERC2-206ENST00000564519 TMEM95Q3KNT9 176 aa10.16□□□□□ -0.78
HERC2-206ENST00000564519 ATAD3CQ5T2N8 411 aa10.16□□□□□ -0.78
HERC2-206ENST00000564519 FAM27D1Q5T7N8 215 aa10.16□□□□□ -0.78
HERC2-206ENST00000564519 AWAT2Q6E213 333 aa10.16□□□□□ -0.78
HERC2-206ENST00000564519 FAM53AQ6NSI3 398 aaPredicted RBP10.16□□□□□ -0.78
HERC2-206ENST00000564519 TMEM104Q8NE00 496 aa10.16□□□□□ -0.78
HERC2-206ENST00000564519 UBALD1Q8TB05 177 aa10.16□□□□□ -0.78
HERC2-206ENST00000564519 CCDC107Q8WV48 283 aa10.16□□□□□ -0.78
HERC2-206ENST00000564519 MND1Q9BWT6 205 aa10.16□□□□□ -0.78
HERC2-206ENST00000564519 MMP28Q9H239 520 aa10.16□□□□□ -0.78
HERC2-206ENST00000564519 BANF2Q9H503 90 aa10.16□□□□□ -0.78
HERC2-206ENST00000564519 PITPNC1Q9UKF7 332 aa10.16□□□□□ -0.78
HERC2-206ENST00000564519 VWFP04275 2813 aa10.15□□□□□ -0.78
HERC2-206ENST00000564519 A0A1W2PPE3 182 aa10.15□□□□□ -0.78
HERC2-206ENST00000564519 TMEM30CPA0ZSE6 113 aa10.15□□□□□ -0.78
HERC2-206ENST00000564519 GNG10P50151 68 aa10.15□□□□□ -0.78
HERC2-206ENST00000564519 PRRX1P54821 245 aa10.15□□□□□ -0.78
HERC2-206ENST00000564519 SLC35A2P78381 396 aa10.15□□□□□ -0.78
HERC2-206ENST00000564519 GABPB1Q06547 395 aaPredicted RBP10.15□□□□□ -0.78
HERC2-206ENST00000564519 IRF3Q14653 427 aa10.15□□□□□ -0.78
HERC2-206ENST00000564519 MPV17LQ2QL34 196 aa10.15□□□□□ -0.78
HERC2-206ENST00000564519 ACSM3Q53FZ2 586 aa10.15□□□□□ -0.78
HERC2-206ENST00000564519 C11orf88Q6PI97 169 aa10.15□□□□□ -0.78
HERC2-206ENST00000564519 UNQ9370/PRO34162Q6UXP9 181 aa10.15□□□□□ -0.78
HERC2-206ENST00000564519 Q6ZTK2 550 aa10.15□□□□□ -0.78
HERC2-206ENST00000564519 LINC00596Q86U02 117 aa10.15□□□□□ -0.78
HERC2-206ENST00000564519 LYG1Q8N1E2 194 aa10.15□□□□□ -0.78
HERC2-206ENST00000564519 OR9G1Q8NH87 305 aa10.15□□□□□ -0.78
HERC2-206ENST00000564519 CFHR4Q92496 578 aa10.15□□□□□ -0.78
HERC2-206ENST00000564519 MYDGFQ969H8 173 aa10.15□□□□□ -0.78
HERC2-206ENST00000564519 TMED9Q9BVK6 235 aa10.15□□□□□ -0.78
HERC2-206ENST00000564519 RCC2Q9P258 522 aaKnown RBP10.15□□□□□ -0.78
HERC2-206ENST00000564519 PSG11Q9UQ72 335 aa10.15□□□□□ -0.78
HERC2-206ENST00000564519 PRKDCP78527 4128 aaKnown RBP10.14□□□□□ -0.79
HERC2-206ENST00000564519 SH2D7A6NKC9 451 aaPredicted RBP10.14□□□□□ -0.79
HERC2-206ENST00000564519 C15orf65H3BRN8 121 aa10.14□□□□□ -0.79
HERC2-206ENST00000564519 J3QR06 171 aa10.14□□□□□ -0.79
HERC2-206ENST00000564519 MT-ND4P03905 459 aa10.14□□□□□ -0.79
HERC2-206ENST00000564519 CD28P10747 220 aa10.14□□□□□ -0.79
HERC2-206ENST00000564519 MYF6P23409 242 aa10.14□□□□□ -0.79
HERC2-206ENST00000564519 GPR176Q14439 515 aa10.14□□□□□ -0.79
HERC2-206ENST00000564519 SPHARQ15513 63 aa10.14□□□□□ -0.79
HERC2-206ENST00000564519 MED22Q15528 200 aa10.14□□□□□ -0.79
HERC2-206ENST00000564519 LRRTM1Q86UE6 522 aa10.14□□□□□ -0.79
HERC2-206ENST00000564519 CDH26Q8IXH8 852 aa10.14□□□□□ -0.79
HERC2-206ENST00000564519 NEK7Q8TDX7 302 aa10.14□□□□□ -0.79
HERC2-206ENST00000564519 WIPF2Q8TF74 440 aaPredicted RBP10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms